EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000005418 (Gene tree)
Gene ID: 100482041
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 2347 bases
Position: chrGL194214.1:159171-161517
Accession: 100482041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000005721	Exo_endo_phos	PF03372.23	1.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000005961	APEX1-201	957	-	ENSAMEP00000005721	318 (aa)	XP_002929556	D2I2U8

Gene Model

Click here to download ENSAMEG00000005418's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000005418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000005418	APEX1	100	95.597	ENSG00000100823	APEX1	100	95.597	Homo_sapiens
ENSAMEG00000005418	APEX1	88	69.176	ENSAPOG00000017002	apex1	91	69.176	Acanthochromis_polyacanthus
ENSAMEG00000005418	APEX1	87	71.014	ENSACIG00000010653	apex1	94	70.609	Amphilophus_citrinellus
ENSAMEG00000005418	APEX1	88	68.817	ENSAOCG00000009649	apex1	90	68.817	Amphiprion_ocellaris
ENSAMEG00000005418	APEX1	88	68.817	ENSAPEG00000021453	apex1	90	68.817	Amphiprion_percula
ENSAMEG00000005418	APEX1	99	67.089	ENSATEG00000002883	apex1	97	67.089	Anabas_testudineus
ENSAMEG00000005418	APEX1	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSAMEG00000005418	APEX1	100	95.912	ENSANAG00000030117	APEX1	100	95.912	Aotus_nancymaae
ENSAMEG00000005418	APEX1	87	71.014	ENSACLG00000018441	apex1	99	66.139	Astatotilapia_calliptera
ENSAMEG00000005418	APEX1	100	65.000	ENSAMXG00000034699	apex1	100	64.062	Astyanax_mexicanus
ENSAMEG00000005418	APEX1	100	97.170	ENSBTAG00000002745	APEX1	100	97.170	Bos_taurus
ENSAMEG00000005418	APEX1	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSAMEG00000005418	APEX1	100	96.541	ENSCJAG00000009726	APEX1	100	96.541	Callithrix_jacchus
ENSAMEG00000005418	APEX1	100	95.597	ENSCAFG00000032033	APEX1	100	95.597	Canis_familiaris
ENSAMEG00000005418	APEX1	54	91.860	ENSCAFG00020023002	-	96	91.860	Canis_lupus_dingo
ENSAMEG00000005418	APEX1	100	95.597	ENSCAFG00020014377	-	100	95.597	Canis_lupus_dingo
ENSAMEG00000005418	APEX1	100	96.541	ENSCHIG00000007298	-	100	96.541	Capra_hircus
ENSAMEG00000005418	APEX1	98	77.564	ENSCHIG00000014537	-	99	77.564	Capra_hircus
ENSAMEG00000005418	APEX1	100	96.226	ENSTSYG00000034813	APEX1	100	96.226	Carlito_syrichta
ENSAMEG00000005418	APEX1	85	89.668	ENSCAPG00000016235	APEX1	91	98.305	Cavia_aperea
ENSAMEG00000005418	APEX1	100	96.541	ENSCPOG00000030909	APEX1	100	96.541	Cavia_porcellus
ENSAMEG00000005418	APEX1	100	83.019	ENSCCAG00000031931	-	100	83.019	Cebus_capucinus
ENSAMEG00000005418	APEX1	100	96.541	ENSCCAG00000033056	-	100	96.541	Cebus_capucinus
ENSAMEG00000005418	APEX1	100	95.283	ENSCATG00000015580	APEX1	100	95.283	Cercocebus_atys
ENSAMEG00000005418	APEX1	100	96.541	ENSCLAG00000001002	APEX1	100	96.541	Chinchilla_lanigera
ENSAMEG00000005418	APEX1	100	94.969	ENSCSAG00000016685	-	100	94.969	Chlorocebus_sabaeus
ENSAMEG00000005418	APEX1	100	94.969	ENSCSAG00000016670	-	100	94.969	Chlorocebus_sabaeus
ENSAMEG00000005418	APEX1	100	70.533	ENSCPBG00000009567	APEX1	100	70.533	Chrysemys_picta_bellii
ENSAMEG00000005418	APEX1	91	54.576	ENSCING00000008137	-	84	58.113	Ciona_intestinalis
ENSAMEG00000005418	APEX1	97	47.319	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSAMEG00000005418	APEX1	100	95.597	ENSCANG00000030726	APEX1	100	95.597	Colobus_angolensis_palliatus
ENSAMEG00000005418	APEX1	100	91.824	ENSCGRG00001017046	Apex1	100	91.824	Cricetulus_griseus_chok1gshd
ENSAMEG00000005418	APEX1	100	91.824	ENSCGRG00000008984	Apex1	100	91.824	Cricetulus_griseus_crigri
ENSAMEG00000005418	APEX1	99	64.465	ENSCSEG00000017499	apex1	99	64.151	Cynoglossus_semilaevis
ENSAMEG00000005418	APEX1	88	70.968	ENSCVAG00000022075	apex1	99	66.456	Cyprinodon_variegatus
ENSAMEG00000005418	APEX1	100	65.723	ENSDARG00000045843	apex1	100	65.723	Danio_rerio
ENSAMEG00000005418	APEX1	100	91.509	ENSDNOG00000042234	APEX1	95	91.509	Dasypus_novemcinctus
ENSAMEG00000005418	APEX1	100	96.541	ENSDORG00000001616	Apex1	100	96.541	Dipodomys_ordii
ENSAMEG00000005418	APEX1	100	94.969	ENSETEG00000004855	-	100	94.969	Echinops_telfairi
ENSAMEG00000005418	APEX1	75	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSAMEG00000005418	APEX1	100	98.113	ENSEASG00005017489	APEX1	74	98.113	Equus_asinus_asinus
ENSAMEG00000005418	APEX1	100	98.113	ENSECAG00000022325	APEX1	82	98.113	Equus_caballus
ENSAMEG00000005418	APEX1	91	95.139	ENSEEUG00000012569	APEX1	100	95.139	Erinaceus_europaeus
ENSAMEG00000005418	APEX1	100	64.465	ENSELUG00000021706	apex1	100	65.409	Esox_lucius
ENSAMEG00000005418	APEX1	100	98.428	ENSFCAG00000030869	APEX1	100	98.428	Felis_catus
ENSAMEG00000005418	APEX1	100	95.597	ENSFDAG00000006120	APEX1	100	95.597	Fukomys_damarensis
ENSAMEG00000005418	APEX1	99	67.722	ENSFHEG00000009031	apex1	83	67.722	Fundulus_heteroclitus
ENSAMEG00000005418	APEX1	99	61.635	ENSGMOG00000007943	apex1	99	61.392	Gadus_morhua
ENSAMEG00000005418	APEX1	88	72.043	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSAMEG00000005418	APEX1	99	64.873	ENSGACG00000019497	apex1	99	69.173	Gasterosteus_aculeatus
ENSAMEG00000005418	APEX1	100	70.219	ENSGAGG00000014999	APEX1	100	70.219	Gopherus_agassizii
ENSAMEG00000005418	APEX1	100	95.912	ENSGGOG00000002128	APEX1	100	95.912	Gorilla_gorilla
ENSAMEG00000005418	APEX1	99	65.506	ENSHBUG00000005894	apex1	99	65.506	Haplochromis_burtoni
ENSAMEG00000005418	APEX1	100	96.855	ENSHGLG00000002848	APEX1	100	96.855	Heterocephalus_glaber_female
ENSAMEG00000005418	APEX1	100	96.855	ENSHGLG00100017878	APEX1	100	96.855	Heterocephalus_glaber_male
ENSAMEG00000005418	APEX1	99	65.517	ENSHCOG00000009961	apex1	89	69.892	Hippocampus_comes
ENSAMEG00000005418	APEX1	100	67.398	ENSIPUG00000005799	apex1	100	66.458	Ictalurus_punctatus
ENSAMEG00000005418	APEX1	100	95.283	ENSSTOG00000010096	APEX1	100	95.283	Ictidomys_tridecemlineatus
ENSAMEG00000005418	APEX1	100	86.164	ENSJJAG00000003660	-	100	86.164	Jaculus_jaculus
ENSAMEG00000005418	APEX1	100	95.912	ENSJJAG00000012067	-	100	95.912	Jaculus_jaculus
ENSAMEG00000005418	APEX1	100	82.390	ENSJJAG00000020465	-	96	86.577	Jaculus_jaculus
ENSAMEG00000005418	APEX1	99	66.456	ENSKMAG00000021171	apex1	99	66.456	Kryptolebias_marmoratus
ENSAMEG00000005418	APEX1	88	67.742	ENSLBEG00000010248	apex1	99	63.898	Labrus_bergylta
ENSAMEG00000005418	APEX1	100	66.875	ENSLACG00000008617	APEX1	100	66.038	Latimeria_chalumnae
ENSAMEG00000005418	APEX1	100	65.839	ENSLOCG00000015516	apex1	99	65.723	Lepisosteus_oculatus
ENSAMEG00000005418	APEX1	100	94.654	ENSLAFG00000021872	APEX1	100	94.654	Loxodonta_africana
ENSAMEG00000005418	APEX1	100	95.283	ENSMFAG00000002565	APEX1	100	95.283	Macaca_fascicularis
ENSAMEG00000005418	APEX1	100	95.283	ENSMMUG00000048039	APEX1	100	95.283	Macaca_mulatta
ENSAMEG00000005418	APEX1	100	95.283	ENSMNEG00000036944	APEX1	100	95.283	Macaca_nemestrina
ENSAMEG00000005418	APEX1	100	95.283	ENSMLEG00000042125	APEX1	100	95.283	Mandrillus_leucophaeus
ENSAMEG00000005418	APEX1	88	70.968	ENSMAMG00000023526	apex1	99	66.772	Mastacembelus_armatus
ENSAMEG00000005418	APEX1	87	71.014	ENSMZEG00005014187	apex1	99	66.139	Maylandia_zebra
ENSAMEG00000005418	APEX1	100	92.767	ENSMAUG00000013994	Apex1	100	92.767	Mesocricetus_auratus
ENSAMEG00000005418	APEX1	100	97.170	ENSMICG00000043554	APEX1	100	97.170	Microcebus_murinus
ENSAMEG00000005418	APEX1	100	93.396	ENSMOCG00000013721	Apex1	100	93.396	Microtus_ochrogaster
ENSAMEG00000005418	APEX1	88	67.143	ENSMMOG00000010031	apex1	87	67.143	Mola_mola
ENSAMEG00000005418	APEX1	100	84.375	ENSMODG00000007125	APEX1	100	84.688	Monodelphis_domestica
ENSAMEG00000005418	APEX1	88	63.441	ENSMALG00000011699	apex1	75	63.441	Monopterus_albus
ENSAMEG00000005418	APEX1	99	94.953	MGP_CAROLIEiJ_G0019209	Apex1	99	94.953	Mus_caroli
ENSAMEG00000005418	APEX1	100	95.597	ENSMUSG00000035960	Apex1	100	95.597	Mus_musculus
ENSAMEG00000005418	APEX1	100	94.969	MGP_PahariEiJ_G0030232	Apex1	100	94.969	Mus_pahari
ENSAMEG00000005418	APEX1	100	95.597	MGP_SPRETEiJ_G0020101	Apex1	100	95.597	Mus_spretus
ENSAMEG00000005418	APEX1	100	97.812	ENSMLUG00000028957	APEX1	100	97.812	Myotis_lucifugus
ENSAMEG00000005418	APEX1	100	71.384	ENSNGAG00000021748	-	99	71.384	Nannospalax_galili
ENSAMEG00000005418	APEX1	100	94.969	ENSNGAG00000002725	-	100	94.969	Nannospalax_galili
ENSAMEG00000005418	APEX1	87	70.652	ENSNBRG00000005334	apex1	91	65.823	Neolamprologus_brichardi
ENSAMEG00000005418	APEX1	100	95.597	ENSNLEG00000010839	APEX1	100	95.597	Nomascus_leucogenys
ENSAMEG00000005418	APEX1	100	87.421	ENSMEUG00000014519	APEX1	100	86.207	Notamacropus_eugenii
ENSAMEG00000005418	APEX1	100	95.283	ENSOPRG00000014029	APEX1	100	94.654	Ochotona_princeps
ENSAMEG00000005418	APEX1	100	73.457	ENSODEG00000006583	-	100	73.457	Octodon_degus
ENSAMEG00000005418	APEX1	100	97.170	ENSODEG00000001703	-	100	97.170	Octodon_degus
ENSAMEG00000005418	APEX1	97	77.346	ENSODEG00000004777	-	99	77.346	Octodon_degus
ENSAMEG00000005418	APEX1	87	70.863	ENSONIG00000012089	apex1	99	66.456	Oreochromis_niloticus
ENSAMEG00000005418	APEX1	90	83.509	ENSOANG00000008836	APEX1	80	78.086	Ornithorhynchus_anatinus
ENSAMEG00000005418	APEX1	100	95.597	ENSOCUG00000005022	APEX1	100	95.597	Oryctolagus_cuniculus
ENSAMEG00000005418	APEX1	99	66.981	ENSORLG00000012378	apex1	99	66.981	Oryzias_latipes
ENSAMEG00000005418	APEX1	99	66.981	ENSORLG00020021371	apex1	99	66.981	Oryzias_latipes_hni
ENSAMEG00000005418	APEX1	99	66.981	ENSORLG00015020089	apex1	99	66.981	Oryzias_latipes_hsok
ENSAMEG00000005418	APEX1	99	66.667	ENSOMEG00000018876	apex1	99	66.667	Oryzias_melastigma
ENSAMEG00000005418	APEX1	98	85.256	ENSOGAG00000029355	-	100	85.256	Otolemur_garnettii
ENSAMEG00000005418	APEX1	100	95.912	ENSOGAG00000013335	-	100	95.912	Otolemur_garnettii
ENSAMEG00000005418	APEX1	100	95.597	ENSOARG00000019740	-	100	95.597	Ovis_aries
ENSAMEG00000005418	APEX1	99	81.646	ENSOARG00000014424	-	100	81.329	Ovis_aries
ENSAMEG00000005418	APEX1	97	92.857	ENSOARG00000001876	-	100	92.857	Ovis_aries
ENSAMEG00000005418	APEX1	100	95.912	ENSPPAG00000038760	APEX1	100	95.912	Pan_paniscus
ENSAMEG00000005418	APEX1	100	98.113	ENSPPRG00000011794	APEX1	100	98.113	Panthera_pardus
ENSAMEG00000005418	APEX1	100	98.428	ENSPTIG00000014829	APEX1	100	98.428	Panthera_tigris_altaica
ENSAMEG00000005418	APEX1	100	95.912	ENSPTRG00000006093	APEX1	100	95.912	Pan_troglodytes
ENSAMEG00000005418	APEX1	100	95.283	ENSPANG00000022757	APEX1	100	95.283	Papio_anubis
ENSAMEG00000005418	APEX1	87	68.478	ENSPKIG00000003504	apex1	100	63.863	Paramormyrops_kingsleyae
ENSAMEG00000005418	APEX1	76	66.667	ENSPMGG00000016596	apex1	73	66.667	Periophthalmus_magnuspinnatus
ENSAMEG00000005418	APEX1	100	94.969	ENSPEMG00000019097	Apex1	100	94.969	Peromyscus_maniculatus_bairdii
ENSAMEG00000005418	APEX1	94	65.667	ENSPMAG00000007275	-	95	67.260	Petromyzon_marinus
ENSAMEG00000005418	APEX1	100	84.326	ENSPCIG00000023274	APEX1	100	85.981	Phascolarctos_cinereus
ENSAMEG00000005418	APEX1	88	72.401	ENSPFOG00000004178	apex1	99	67.405	Poecilia_formosa
ENSAMEG00000005418	APEX1	88	72.043	ENSPLAG00000012779	apex1	99	67.089	Poecilia_latipinna
ENSAMEG00000005418	APEX1	88	72.401	ENSPMEG00000019623	apex1	99	67.405	Poecilia_mexicana
ENSAMEG00000005418	APEX1	88	71.685	ENSPREG00000014298	apex1	99	66.772	Poecilia_reticulata
ENSAMEG00000005418	APEX1	100	95.597	ENSPPYG00000005565	APEX1	100	95.597	Pongo_abelii
ENSAMEG00000005418	APEX1	100	92.138	ENSPCAG00000010376	APEX1	100	92.138	Procavia_capensis
ENSAMEG00000005418	APEX1	100	97.170	ENSPCOG00000021564	APEX1	100	97.170	Propithecus_coquereli
ENSAMEG00000005418	APEX1	100	96.562	ENSPVAG00000010736	APEX1	100	96.562	Pteropus_vampyrus
ENSAMEG00000005418	APEX1	87	71.014	ENSPNYG00000023940	apex1	99	66.139	Pundamilia_nyererei
ENSAMEG00000005418	APEX1	93	65.203	ENSPNAG00000020897	apex1	96	64.068	Pygocentrus_nattereri
ENSAMEG00000005418	APEX1	100	94.654	ENSRNOG00000009663	Apex1	100	94.654	Rattus_norvegicus
ENSAMEG00000005418	APEX1	100	95.283	ENSRBIG00000038325	APEX1	99	95.283	Rhinopithecus_bieti
ENSAMEG00000005418	APEX1	100	81.132	ENSSBOG00000031372	-	100	81.132	Saimiri_boliviensis_boliviensis
ENSAMEG00000005418	APEX1	100	96.226	ENSSBOG00000018921	-	100	96.226	Saimiri_boliviensis_boliviensis
ENSAMEG00000005418	APEX1	100	83.333	ENSSHAG00000013524	APEX1	100	83.333	Sarcophilus_harrisii
ENSAMEG00000005418	APEX1	87	65.942	ENSSFOG00015001948	apex1	100	61.321	Scleropages_formosus
ENSAMEG00000005418	APEX1	87	69.203	ENSSMAG00000013348	apex1	99	65.300	Scophthalmus_maximus
ENSAMEG00000005418	APEX1	99	65.190	ENSSDUG00000016377	apex1	99	65.190	Seriola_dumerili
ENSAMEG00000005418	APEX1	99	65.823	ENSSLDG00000023005	apex1	99	65.823	Seriola_lalandi_dorsalis
ENSAMEG00000005418	APEX1	90	72.632	ENSSPUG00000000531	APEX1	95	72.632	Sphenodon_punctatus
ENSAMEG00000005418	APEX1	88	69.534	ENSSPAG00000000458	apex1	99	64.873	Stegastes_partitus
ENSAMEG00000005418	APEX1	100	97.484	ENSSSCG00000040060	-	100	97.484	Sus_scrofa
ENSAMEG00000005418	APEX1	96	57.419	ENSSSCG00000039705	-	96	57.419	Sus_scrofa
ENSAMEG00000005418	APEX1	74	59.746	ENSTGUG00000014378	APEX1	100	59.746	Taeniopygia_guttata
ENSAMEG00000005418	APEX1	87	67.391	ENSTRUG00000004268	apex1	95	62.658	Takifugu_rubripes
ENSAMEG00000005418	APEX1	99	63.291	ENSTNIG00000005778	apex1	99	63.291	Tetraodon_nigroviridis
ENSAMEG00000005418	APEX1	100	92.453	ENSTBEG00000006405	APEX1	100	92.453	Tupaia_belangeri
ENSAMEG00000005418	APEX1	74	97.034	ENSTTRG00000007860	APEX1	100	97.034	Tursiops_truncatus
ENSAMEG00000005418	APEX1	100	99.057	ENSUAMG00000010457	APEX1	100	99.057	Ursus_americanus
ENSAMEG00000005418	APEX1	100	99.057	ENSUMAG00000009178	APEX1	100	99.057	Ursus_maritimus
ENSAMEG00000005418	APEX1	74	91.525	ENSVPAG00000005083	APEX1	100	91.525	Vicugna_pacos
ENSAMEG00000005418	APEX1	100	94.969	ENSVVUG00000009010	APEX1	100	94.969	Vulpes_vulpes
ENSAMEG00000005418	APEX1	100	64.396	ENSXETG00000024773	apex1	100	62.918	Xenopus_tropicalis
ENSAMEG00000005418	APEX1	88	72.043	ENSXCOG00000015233	apex1	99	67.722	Xiphophorus_couchianus
ENSAMEG00000005418	APEX1	93	67.752	ENSXMAG00000006195	apex1	99	67.722	Xiphophorus_maculatus