EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000005425 (Gene tree)
Gene ID: 100477780
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 18020 bases
Position: chrGL192359.1:2884192-2902211
Accession: 100477780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000005749	zf-C3HC	PF07967.13	1.6e-35	1	1
ENSAMEP00000005749	Rsm1	PF08600.10	1.7e-16	1	2
ENSAMEP00000005749	Rsm1	PF08600.10	1.7e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000005990	ZC3HC1-201	1515	XM_019804251	ENSAMEP00000005749	504 (aa)	XP_019659810	G1LFR0

Gene Model

Click here to download ENSAMEG00000005425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000005425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000005425	ZC3HC1	99	91.252	ENSG00000091732	ZC3HC1	99	91.252	Homo_sapiens
ENSAMEG00000005425	ZC3HC1	95	45.070	ENSAPOG00000009078	zc3hc1	95	44.467	Acanthochromis_polyacanthus
ENSAMEG00000005425	ZC3HC1	95	43.232	ENSACIG00000019513	zc3hc1	95	42.656	Amphilophus_citrinellus
ENSAMEG00000005425	ZC3HC1	95	45.070	ENSAOCG00000024310	zc3hc1	95	44.467	Amphiprion_ocellaris
ENSAMEG00000005425	ZC3HC1	95	45.070	ENSAPEG00000004907	zc3hc1	95	44.467	Amphiprion_percula
ENSAMEG00000005425	ZC3HC1	81	47.765	ENSATEG00000016898	zc3hc1	85	47.196	Anabas_testudineus
ENSAMEG00000005425	ZC3HC1	88	61.298	ENSAPLG00000003832	ZC3HC1	99	61.298	Anas_platyrhynchos
ENSAMEG00000005425	ZC3HC1	100	60.470	ENSACAG00000001638	ZC3HC1	100	60.470	Anolis_carolinensis
ENSAMEG00000005425	ZC3HC1	100	89.683	ENSANAG00000022213	ZC3HC1	100	89.683	Aotus_nancymaae
ENSAMEG00000005425	ZC3HC1	88	44.776	ENSACLG00000025033	zc3hc1	98	44.136	Astatotilapia_calliptera
ENSAMEG00000005425	ZC3HC1	94	43.827	ENSAMXG00000036792	zc3hc1	97	43.802	Astyanax_mexicanus
ENSAMEG00000005425	ZC3HC1	100	90.476	ENSBTAG00000011247	ZC3HC1	100	90.476	Bos_taurus
ENSAMEG00000005425	ZC3HC1	100	89.881	ENSCJAG00000010536	ZC3HC1	100	89.881	Callithrix_jacchus
ENSAMEG00000005425	ZC3HC1	100	93.651	ENSCAFG00000031850	-	100	93.651	Canis_familiaris
ENSAMEG00000005425	ZC3HC1	100	93.254	ENSCAFG00000028735	-	100	93.254	Canis_familiaris
ENSAMEG00000005425	ZC3HC1	100	94.257	ENSCAFG00000001499	-	99	94.257	Canis_familiaris
ENSAMEG00000005425	ZC3HC1	100	93.254	ENSCAFG00000029401	-	99	93.254	Canis_familiaris
ENSAMEG00000005425	ZC3HC1	100	92.857	ENSCAFG00020023333	-	100	92.857	Canis_lupus_dingo
ENSAMEG00000005425	ZC3HC1	100	93.452	ENSCAFG00020006829	-	100	93.452	Canis_lupus_dingo
ENSAMEG00000005425	ZC3HC1	100	84.524	ENSCHIG00000014103	ZC3HC1	100	84.524	Capra_hircus
ENSAMEG00000005425	ZC3HC1	100	88.690	ENSTSYG00000002843	ZC3HC1	100	88.690	Carlito_syrichta
ENSAMEG00000005425	ZC3HC1	90	63.537	ENSCAPG00000016300	ZC3HC1	100	63.399	Cavia_aperea
ENSAMEG00000005425	ZC3HC1	100	84.921	ENSCPOG00000014034	ZC3HC1	100	84.524	Cavia_porcellus
ENSAMEG00000005425	ZC3HC1	100	73.016	ENSCCAG00000020384	ZC3HC1	100	88.987	Cebus_capucinus
ENSAMEG00000005425	ZC3HC1	100	91.270	ENSCATG00000023130	ZC3HC1	100	91.270	Cercocebus_atys
ENSAMEG00000005425	ZC3HC1	100	62.302	ENSCLAG00000008260	ZC3HC1	100	60.792	Chinchilla_lanigera
ENSAMEG00000005425	ZC3HC1	73	90.984	ENSCSAG00000009881	ZC3HC1	97	90.984	Chlorocebus_sabaeus
ENSAMEG00000005425	ZC3HC1	90	89.625	ENSCHOG00000011846	ZC3HC1	99	89.625	Choloepus_hoffmanni
ENSAMEG00000005425	ZC3HC1	96	67.623	ENSCPBG00000017519	ZC3HC1	100	66.798	Chrysemys_picta_bellii
ENSAMEG00000005425	ZC3HC1	50	30.350	ENSCING00000004440	-	58	30.116	Ciona_intestinalis
ENSAMEG00000005425	ZC3HC1	100	91.071	ENSCANG00000029091	ZC3HC1	100	91.071	Colobus_angolensis_palliatus
ENSAMEG00000005425	ZC3HC1	100	85.913	ENSCGRG00001018805	Zc3hc1	100	85.913	Cricetulus_griseus_chok1gshd
ENSAMEG00000005425	ZC3HC1	100	84.722	ENSCGRG00000017114	Zc3hc1	100	84.722	Cricetulus_griseus_crigri
ENSAMEG00000005425	ZC3HC1	96	42.885	ENSCSEG00000009284	zc3hc1	94	42.292	Cynoglossus_semilaevis
ENSAMEG00000005425	ZC3HC1	94	42.536	ENSCVAG00000011566	zc3hc1	94	41.922	Cyprinodon_variegatus
ENSAMEG00000005425	ZC3HC1	97	46.707	ENSDARG00000062651	zc3hc1	97	46.108	Danio_rerio
ENSAMEG00000005425	ZC3HC1	100	88.095	ENSDNOG00000045016	ZC3HC1	100	88.095	Dasypus_novemcinctus
ENSAMEG00000005425	ZC3HC1	100	78.770	ENSDORG00000008697	Zc3hc1	100	78.770	Dipodomys_ordii
ENSAMEG00000005425	ZC3HC1	90	91.189	ENSEASG00005008789	ZC3HC1	97	91.189	Equus_asinus_asinus
ENSAMEG00000005425	ZC3HC1	100	91.089	ENSECAG00000017886	ZC3HC1	100	91.089	Equus_caballus
ENSAMEG00000005425	ZC3HC1	84	83.333	ENSEEUG00000003123	ZC3HC1	84	83.333	Erinaceus_europaeus
ENSAMEG00000005425	ZC3HC1	94	43.408	ENSELUG00000023168	zc3hc1	94	44.646	Esox_lucius
ENSAMEG00000005425	ZC3HC1	100	93.056	ENSFCAG00000010429	ZC3HC1	100	93.056	Felis_catus
ENSAMEG00000005425	ZC3HC1	90	60.043	ENSFALG00000005006	ZC3HC1	100	60.043	Ficedula_albicollis
ENSAMEG00000005425	ZC3HC1	100	86.310	ENSFDAG00000019897	ZC3HC1	100	86.310	Fukomys_damarensis
ENSAMEG00000005425	ZC3HC1	96	42.829	ENSFHEG00000020149	zc3hc1	99	41.075	Fundulus_heteroclitus
ENSAMEG00000005425	ZC3HC1	94	42.149	ENSGMOG00000002914	zc3hc1	95	41.116	Gadus_morhua
ENSAMEG00000005425	ZC3HC1	99	61.508	ENSGALG00000008003	ZC3HC1	99	61.508	Gallus_gallus
ENSAMEG00000005425	ZC3HC1	95	43.496	ENSGAFG00000016095	zc3hc1	96	42.886	Gambusia_affinis
ENSAMEG00000005425	ZC3HC1	94	45.287	ENSGACG00000019706	zc3hc1	94	45.306	Gasterosteus_aculeatus
ENSAMEG00000005425	ZC3HC1	77	68.798	ENSGAGG00000016106	ZC3HC1	100	68.798	Gopherus_agassizii
ENSAMEG00000005425	ZC3HC1	99	91.252	ENSGGOG00000015504	ZC3HC1	99	91.252	Gorilla_gorilla
ENSAMEG00000005425	ZC3HC1	94	43.788	ENSHBUG00000008347	zc3hc1	94	43.177	Haplochromis_burtoni
ENSAMEG00000005425	ZC3HC1	100	88.294	ENSHGLG00000005085	ZC3HC1	100	88.294	Heterocephalus_glaber_female
ENSAMEG00000005425	ZC3HC1	100	88.095	ENSHGLG00100011395	ZC3HC1	100	88.095	Heterocephalus_glaber_male
ENSAMEG00000005425	ZC3HC1	95	43.416	ENSHCOG00000014309	zc3hc1	95	43.121	Hippocampus_comes
ENSAMEG00000005425	ZC3HC1	100	88.690	ENSSTOG00000023599	-	100	88.690	Ictidomys_tridecemlineatus
ENSAMEG00000005425	ZC3HC1	94	44.603	ENSKMAG00000015315	zc3hc1	88	43.585	Kryptolebias_marmoratus
ENSAMEG00000005425	ZC3HC1	95	43.912	ENSLBEG00000017325	zc3hc1	95	43.340	Labrus_bergylta
ENSAMEG00000005425	ZC3HC1	79	54.634	ENSLACG00000013032	ZC3HC1	97	53.717	Latimeria_chalumnae
ENSAMEG00000005425	ZC3HC1	99	51.670	ENSLOCG00000015963	zc3hc1	99	52.157	Lepisosteus_oculatus
ENSAMEG00000005425	ZC3HC1	100	88.340	ENSLAFG00000001292	ZC3HC1	100	88.340	Loxodonta_africana
ENSAMEG00000005425	ZC3HC1	100	91.468	ENSMFAG00000030176	ZC3HC1	100	91.468	Macaca_fascicularis
ENSAMEG00000005425	ZC3HC1	100	90.476	ENSMMUG00000006155	ZC3HC1	100	90.476	Macaca_mulatta
ENSAMEG00000005425	ZC3HC1	100	91.667	ENSMNEG00000011833	ZC3HC1	100	91.667	Macaca_nemestrina
ENSAMEG00000005425	ZC3HC1	100	91.468	ENSMLEG00000027328	ZC3HC1	100	91.468	Mandrillus_leucophaeus
ENSAMEG00000005425	ZC3HC1	95	44.177	ENSMAMG00000010691	zc3hc1	95	43.600	Mastacembelus_armatus
ENSAMEG00000005425	ZC3HC1	94	43.585	ENSMZEG00005007142	zc3hc1	94	42.974	Maylandia_zebra
ENSAMEG00000005425	ZC3HC1	99	60.827	ENSMGAG00000002977	ZC3HC1	99	61.417	Meleagris_gallopavo
ENSAMEG00000005425	ZC3HC1	81	80.723	ENSMAUG00000017032	Zc3hc1	92	80.723	Mesocricetus_auratus
ENSAMEG00000005425	ZC3HC1	100	89.286	ENSMICG00000009167	ZC3HC1	100	89.286	Microcebus_murinus
ENSAMEG00000005425	ZC3HC1	100	85.119	ENSMOCG00000015239	Zc3hc1	100	85.119	Microtus_ochrogaster
ENSAMEG00000005425	ZC3HC1	86	43.584	ENSMMOG00000002204	zc3hc1	98	42.699	Mola_mola
ENSAMEG00000005425	ZC3HC1	100	64.176	ENSMODG00000014630	ZC3HC1	100	64.176	Monodelphis_domestica
ENSAMEG00000005425	ZC3HC1	94	44.106	ENSMALG00000014447	zc3hc1	95	44.266	Monopterus_albus
ENSAMEG00000005425	ZC3HC1	100	85.317	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	85.317	Mus_caroli
ENSAMEG00000005425	ZC3HC1	100	85.119	ENSMUSG00000039130	Zc3hc1	100	85.119	Mus_musculus
ENSAMEG00000005425	ZC3HC1	100	78.968	MGP_PahariEiJ_G0021941	Zc3hc1	100	78.968	Mus_pahari
ENSAMEG00000005425	ZC3HC1	100	85.119	MGP_SPRETEiJ_G0029183	Zc3hc1	100	85.119	Mus_spretus
ENSAMEG00000005425	ZC3HC1	96	93.983	ENSMPUG00000005297	ZC3HC1	95	93.983	Mustela_putorius_furo
ENSAMEG00000005425	ZC3HC1	100	90.099	ENSMLUG00000000063	-	100	90.099	Myotis_lucifugus
ENSAMEG00000005425	ZC3HC1	67	83.382	ENSMLUG00000029228	-	99	83.382	Myotis_lucifugus
ENSAMEG00000005425	ZC3HC1	100	86.139	ENSNGAG00000019014	Zc3hc1	100	86.139	Nannospalax_galili
ENSAMEG00000005425	ZC3HC1	94	43.673	ENSNBRG00000004577	zc3hc1	94	43.061	Neolamprologus_brichardi
ENSAMEG00000005425	ZC3HC1	99	89.861	ENSNLEG00000012698	ZC3HC1	99	89.861	Nomascus_leucogenys
ENSAMEG00000005425	ZC3HC1	100	77.976	ENSMEUG00000011023	ZC3HC1	100	77.976	Notamacropus_eugenii
ENSAMEG00000005425	ZC3HC1	65	82.308	ENSOPRG00000007867	-	67	82.308	Ochotona_princeps
ENSAMEG00000005425	ZC3HC1	100	84.921	ENSODEG00000014604	ZC3HC1	100	84.722	Octodon_degus
ENSAMEG00000005425	ZC3HC1	94	44.196	ENSONIG00000011644	zc3hc1	94	43.585	Oreochromis_niloticus
ENSAMEG00000005425	ZC3HC1	90	69.181	ENSOANG00000011460	ZC3HC1	100	69.181	Ornithorhynchus_anatinus
ENSAMEG00000005425	ZC3HC1	100	85.545	ENSOCUG00000017137	ZC3HC1	100	85.545	Oryctolagus_cuniculus
ENSAMEG00000005425	ZC3HC1	95	43.548	ENSORLG00000014409	zc3hc1	94	43.548	Oryzias_latipes
ENSAMEG00000005425	ZC3HC1	95	43.347	ENSORLG00020015874	zc3hc1	94	43.347	Oryzias_latipes_hni
ENSAMEG00000005425	ZC3HC1	95	43.145	ENSORLG00015014641	zc3hc1	94	43.145	Oryzias_latipes_hsok
ENSAMEG00000005425	ZC3HC1	95	45.194	ENSOMEG00000020604	zc3hc1	95	44.752	Oryzias_melastigma
ENSAMEG00000005425	ZC3HC1	95	44.785	ENSOMEG00000000215	zc3hc1	94	44.785	Oryzias_melastigma
ENSAMEG00000005425	ZC3HC1	100	83.532	ENSOGAG00000026193	ZC3HC1	100	83.532	Otolemur_garnettii
ENSAMEG00000005425	ZC3HC1	100	91.881	ENSOARG00000004907	ZC3HC1	99	91.881	Ovis_aries
ENSAMEG00000005425	ZC3HC1	99	91.451	ENSPPAG00000043172	ZC3HC1	99	91.451	Pan_paniscus
ENSAMEG00000005425	ZC3HC1	100	92.460	ENSPPRG00000001004	ZC3HC1	100	92.460	Panthera_pardus
ENSAMEG00000005425	ZC3HC1	100	93.254	ENSPTIG00000007823	ZC3HC1	100	93.254	Panthera_tigris_altaica
ENSAMEG00000005425	ZC3HC1	99	91.252	ENSPTRG00000019685	ZC3HC1	99	91.252	Pan_troglodytes
ENSAMEG00000005425	ZC3HC1	100	90.278	ENSPANG00000014229	ZC3HC1	100	90.278	Papio_anubis
ENSAMEG00000005425	ZC3HC1	95	48.354	ENSPKIG00000007172	zc3hc1	95	48.665	Paramormyrops_kingsleyae
ENSAMEG00000005425	ZC3HC1	95	61.837	ENSPSIG00000016646	ZC3HC1	100	60.388	Pelodiscus_sinensis
ENSAMEG00000005425	ZC3HC1	94	41.331	ENSPMGG00000003548	zc3hc1	95	41.129	Periophthalmus_magnuspinnatus
ENSAMEG00000005425	ZC3HC1	100	85.516	ENSPEMG00000000514	Zc3hc1	100	85.516	Peromyscus_maniculatus_bairdii
ENSAMEG00000005425	ZC3HC1	99	74.950	ENSPCIG00000020619	ZC3HC1	100	78.920	Phascolarctos_cinereus
ENSAMEG00000005425	ZC3HC1	96	43.513	ENSPFOG00000003466	zc3hc1	96	43.141	Poecilia_formosa
ENSAMEG00000005425	ZC3HC1	96	42.972	ENSPLAG00000022211	zc3hc1	96	42.600	Poecilia_latipinna
ENSAMEG00000005425	ZC3HC1	96	43.373	ENSPMEG00000001458	zc3hc1	96	43.000	Poecilia_mexicana
ENSAMEG00000005425	ZC3HC1	96	43.574	ENSPREG00000004004	zc3hc1	96	43.000	Poecilia_reticulata
ENSAMEG00000005425	ZC3HC1	99	83.168	ENSPPYG00000017998	ZC3HC1	99	83.168	Pongo_abelii
ENSAMEG00000005425	ZC3HC1	92	84.848	ENSPCAG00000001182	ZC3HC1	100	84.848	Procavia_capensis
ENSAMEG00000005425	ZC3HC1	100	90.278	ENSPCOG00000017354	ZC3HC1	100	90.278	Propithecus_coquereli
ENSAMEG00000005425	ZC3HC1	100	84.921	ENSPVAG00000003195	ZC3HC1	100	84.524	Pteropus_vampyrus
ENSAMEG00000005425	ZC3HC1	94	43.585	ENSPNYG00000020692	zc3hc1	94	42.974	Pundamilia_nyererei
ENSAMEG00000005425	ZC3HC1	93	44.770	ENSPNAG00000020746	zc3hc1	95	44.561	Pygocentrus_nattereri
ENSAMEG00000005425	ZC3HC1	100	84.921	ENSRNOG00000010154	Zc3hc1	100	84.921	Rattus_norvegicus
ENSAMEG00000005425	ZC3HC1	90	90.989	ENSRBIG00000029409	ZC3HC1	100	90.989	Rhinopithecus_bieti
ENSAMEG00000005425	ZC3HC1	100	91.071	ENSRROG00000041831	ZC3HC1	100	91.071	Rhinopithecus_roxellana
ENSAMEG00000005425	ZC3HC1	88	89.855	ENSSBOG00000032787	ZC3HC1	100	89.855	Saimiri_boliviensis_boliviensis
ENSAMEG00000005425	ZC3HC1	92	79.140	ENSSHAG00000002529	ZC3HC1	100	79.140	Sarcophilus_harrisii
ENSAMEG00000005425	ZC3HC1	95	48.875	ENSSFOG00015003667	zc3hc1	91	47.667	Scleropages_formosus
ENSAMEG00000005425	ZC3HC1	95	43.976	ENSSMAG00000000647	zc3hc1	86	43.976	Scophthalmus_maximus
ENSAMEG00000005425	ZC3HC1	95	45.436	ENSSDUG00000004241	zc3hc1	93	44.646	Seriola_dumerili
ENSAMEG00000005425	ZC3HC1	95	45.436	ENSSLDG00000025056	zc3hc1	93	44.848	Seriola_lalandi_dorsalis
ENSAMEG00000005425	ZC3HC1	99	78.926	ENSSARG00000012013	ZC3HC1	99	78.926	Sorex_araneus
ENSAMEG00000005425	ZC3HC1	86	58.352	ENSSPUG00000000778	ZC3HC1	86	58.352	Sphenodon_punctatus
ENSAMEG00000005425	ZC3HC1	95	46.263	ENSSPAG00000020041	zc3hc1	95	45.674	Stegastes_partitus
ENSAMEG00000005425	ZC3HC1	100	90.079	ENSSSCG00000016565	ZC3HC1	100	90.079	Sus_scrofa
ENSAMEG00000005425	ZC3HC1	94	42.363	ENSTRUG00000020077	zc3hc1	95	41.498	Takifugu_rubripes
ENSAMEG00000005425	ZC3HC1	94	43.648	ENSTNIG00000007585	zc3hc1	99	43.673	Tetraodon_nigroviridis
ENSAMEG00000005425	ZC3HC1	99	78.728	ENSTBEG00000005216	ZC3HC1	99	78.728	Tupaia_belangeri
ENSAMEG00000005425	ZC3HC1	95	90.041	ENSTTRG00000008458	ZC3HC1	100	90.041	Tursiops_truncatus
ENSAMEG00000005425	ZC3HC1	100	97.817	ENSUAMG00000020249	ZC3HC1	100	97.817	Ursus_americanus
ENSAMEG00000005425	ZC3HC1	100	97.421	ENSUMAG00000009268	ZC3HC1	100	97.421	Ursus_maritimus
ENSAMEG00000005425	ZC3HC1	78	91.837	ENSVPAG00000010846	ZC3HC1	77	91.837	Vicugna_pacos
ENSAMEG00000005425	ZC3HC1	95	93.555	ENSVVUG00000012386	ZC3HC1	99	93.555	Vulpes_vulpes
ENSAMEG00000005425	ZC3HC1	91	52.891	ENSXETG00000033900	zc3hc1	96	52.891	Xenopus_tropicalis
ENSAMEG00000005425	ZC3HC1	96	42.972	ENSXCOG00000013570	zc3hc1	96	42.400	Xiphophorus_couchianus
ENSAMEG00000005425	ZC3HC1	86	44.889	ENSXMAG00000010979	zc3hc1	95	44.201	Xiphophorus_maculatus