EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000005688 (Gene tree)
Gene ID: 100467279
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 35188 bases
Position: chrGL194198.1:174432-209619
Accession: 100467279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000006033	YTH	PF04146.15	1.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000006282	YTHDC1-201	2190	-	ENSAMEP00000006033	730 (aa)	XP_002929502	G1LGJ3

Gene Model

Click here to download ENSAMEG00000005688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000005688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000005688	YTHDC1	100	97.401	ENSG00000083896	YTHDC1	100	97.401	Homo_sapiens
ENSAMEG00000005688	YTHDC1	57	60.241	ENSAPOG00000013997	ythdc1	57	63.221	Acanthochromis_polyacanthus
ENSAMEG00000005688	YTHDC1	82	54.200	ENSACIG00000019728	ythdc1	80	60.048	Amphilophus_citrinellus
ENSAMEG00000005688	YTHDC1	57	61.927	ENSAOCG00000000239	ythdc1	59	66.970	Amphiprion_ocellaris
ENSAMEG00000005688	YTHDC1	91	84.708	ENSAPLG00000009921	YTHDC1	60	96.897	Anas_platyrhynchos
ENSAMEG00000005688	YTHDC1	93	83.752	ENSACAG00000009697	YTHDC1	93	83.309	Anolis_carolinensis
ENSAMEG00000005688	YTHDC1	100	97.538	ENSANAG00000001522	YTHDC1	100	97.538	Aotus_nancymaae
ENSAMEG00000005688	YTHDC1	57	60.780	ENSACLG00000019371	ythdc1	59	66.133	Astatotilapia_calliptera
ENSAMEG00000005688	YTHDC1	93	64.080	ENSAMXG00000006978	ythdc1	58	79.814	Astyanax_mexicanus
ENSAMEG00000005688	YTHDC1	100	97.808	ENSBTAG00000015572	YTHDC1	100	97.808	Bos_taurus
ENSAMEG00000005688	YTHDC1	100	97.811	ENSCJAG00000009934	YTHDC1	100	97.811	Callithrix_jacchus
ENSAMEG00000005688	YTHDC1	100	99.589	ENSCAFG00000002821	YTHDC1	100	99.589	Canis_familiaris
ENSAMEG00000005688	YTHDC1	100	99.589	ENSCAFG00020027112	YTHDC1	100	99.589	Canis_lupus_dingo
ENSAMEG00000005688	YTHDC1	91	86.370	ENSCHIG00000004810	YTHDC1	95	91.856	Capra_hircus
ENSAMEG00000005688	YTHDC1	100	97.674	ENSTSYG00000011668	YTHDC1	100	97.674	Carlito_syrichta
ENSAMEG00000005688	YTHDC1	90	67.727	ENSCAPG00000008722	YTHDC1	90	67.216	Cavia_aperea
ENSAMEG00000005688	YTHDC1	100	90.014	ENSCPOG00000010929	YTHDC1	100	90.014	Cavia_porcellus
ENSAMEG00000005688	YTHDC1	100	97.538	ENSCCAG00000035754	YTHDC1	100	97.538	Cebus_capucinus
ENSAMEG00000005688	YTHDC1	100	96.482	ENSCATG00000036320	YTHDC1	100	96.482	Cercocebus_atys
ENSAMEG00000005688	YTHDC1	99	93.897	ENSCLAG00000005482	YTHDC1	99	93.897	Chinchilla_lanigera
ENSAMEG00000005688	YTHDC1	100	97.538	ENSCSAG00000005252	YTHDC1	100	97.538	Chlorocebus_sabaeus
ENSAMEG00000005688	YTHDC1	92	86.350	ENSCPBG00000021965	YTHDC1	63	97.136	Chrysemys_picta_bellii
ENSAMEG00000005688	YTHDC1	100	97.674	ENSCANG00000004769	YTHDC1	100	97.674	Colobus_angolensis_palliatus
ENSAMEG00000005688	YTHDC1	100	93.434	ENSCGRG00001000816	Ythdc1	100	93.434	Cricetulus_griseus_chok1gshd
ENSAMEG00000005688	YTHDC1	99	95.845	ENSCGRG00000009807	Ythdc1	99	95.845	Cricetulus_griseus_crigri
ENSAMEG00000005688	YTHDC1	57	60.793	ENSCSEG00000020404	ythdc1	59	65.982	Cynoglossus_semilaevis
ENSAMEG00000005688	YTHDC1	57	60.089	ENSCVAG00000022349	ythdc1	59	66.055	Cyprinodon_variegatus
ENSAMEG00000005688	YTHDC1	93	63.716	ENSDARG00000051953	ythdc1	58	78.588	Danio_rerio
ENSAMEG00000005688	YTHDC1	100	96.175	ENSDNOG00000004949	YTHDC1	100	96.175	Dasypus_novemcinctus
ENSAMEG00000005688	YTHDC1	99	97.083	ENSDORG00000013045	Ythdc1	100	97.083	Dipodomys_ordii
ENSAMEG00000005688	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSAMEG00000005688	YTHDC1	100	99.452	ENSEASG00005018383	YTHDC1	100	99.452	Equus_asinus_asinus
ENSAMEG00000005688	YTHDC1	100	99.041	ENSECAG00000018303	YTHDC1	100	99.041	Equus_caballus
ENSAMEG00000005688	YTHDC1	100	96.438	ENSEEUG00000015466	YTHDC1	100	96.438	Erinaceus_europaeus
ENSAMEG00000005688	YTHDC1	93	61.864	ENSELUG00000014029	ythdc1	57	76.716	Esox_lucius
ENSAMEG00000005688	YTHDC1	100	99.452	ENSFCAG00000026791	YTHDC1	100	99.452	Felis_catus
ENSAMEG00000005688	YTHDC1	68	89.679	ENSFALG00000006581	YTHDC1	87	97.449	Ficedula_albicollis
ENSAMEG00000005688	YTHDC1	99	96.671	ENSFDAG00000018560	YTHDC1	100	96.671	Fukomys_damarensis
ENSAMEG00000005688	YTHDC1	65	58.730	ENSFHEG00000001286	ythdc1	60	55.422	Fundulus_heteroclitus
ENSAMEG00000005688	YTHDC1	63	64.539	ENSGMOG00000018815	ythdc1	78	62.989	Gadus_morhua
ENSAMEG00000005688	YTHDC1	92	85.587	ENSGALG00000035906	YTHDC1	56	96.659	Gallus_gallus
ENSAMEG00000005688	YTHDC1	55	64.194	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSAMEG00000005688	YTHDC1	57	63.084	ENSGACG00000015486	ythdc1	57	62.500	Gasterosteus_aculeatus
ENSAMEG00000005688	YTHDC1	93	85.255	ENSGAGG00000007108	YTHDC1	60	95.082	Gopherus_agassizii
ENSAMEG00000005688	YTHDC1	100	96.482	ENSGGOG00000021958	YTHDC1	100	96.482	Gorilla_gorilla
ENSAMEG00000005688	YTHDC1	57	60.092	ENSHBUG00000019288	ythdc1	59	66.133	Haplochromis_burtoni
ENSAMEG00000005688	YTHDC1	94	69.767	ENSHGLG00000003239	-	57	77.751	Heterocephalus_glaber_female
ENSAMEG00000005688	YTHDC1	100	95.399	ENSHGLG00000006319	-	100	95.399	Heterocephalus_glaber_female
ENSAMEG00000005688	YTHDC1	100	95.510	ENSHGLG00100001556	-	100	95.510	Heterocephalus_glaber_male
ENSAMEG00000005688	YTHDC1	94	68.886	ENSHGLG00100008060	-	57	75.297	Heterocephalus_glaber_male
ENSAMEG00000005688	YTHDC1	53	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSAMEG00000005688	YTHDC1	93	67.391	ENSIPUG00000018136	ythdc1	61	84.223	Ictalurus_punctatus
ENSAMEG00000005688	YTHDC1	100	96.482	ENSSTOG00000013652	YTHDC1	100	96.482	Ictidomys_tridecemlineatus
ENSAMEG00000005688	YTHDC1	91	89.926	ENSJJAG00000010268	Ythdc1	93	90.370	Jaculus_jaculus
ENSAMEG00000005688	YTHDC1	57	60.731	ENSKMAG00000006483	ythdc1	85	65.525	Kryptolebias_marmoratus
ENSAMEG00000005688	YTHDC1	64	61.995	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSAMEG00000005688	YTHDC1	87	74.335	ENSLACG00000004893	YTHDC1	92	74.922	Latimeria_chalumnae
ENSAMEG00000005688	YTHDC1	93	73.049	ENSLOCG00000003045	ythdc1	92	89.183	Lepisosteus_oculatus
ENSAMEG00000005688	YTHDC1	100	95.264	ENSLAFG00000021592	YTHDC1	100	96.919	Loxodonta_africana
ENSAMEG00000005688	YTHDC1	100	96.617	ENSMFAG00000031927	YTHDC1	100	96.617	Macaca_fascicularis
ENSAMEG00000005688	YTHDC1	100	97.674	ENSMMUG00000002265	YTHDC1	100	97.674	Macaca_mulatta
ENSAMEG00000005688	YTHDC1	100	97.674	ENSMNEG00000033751	YTHDC1	100	97.674	Macaca_nemestrina
ENSAMEG00000005688	YTHDC1	100	97.538	ENSMLEG00000042147	YTHDC1	100	97.538	Mandrillus_leucophaeus
ENSAMEG00000005688	YTHDC1	57	60.092	ENSMZEG00005023173	ythdc1	59	66.133	Maylandia_zebra
ENSAMEG00000005688	YTHDC1	93	84.343	ENSMGAG00000010391	YTHDC1	59	96.659	Meleagris_gallopavo
ENSAMEG00000005688	YTHDC1	100	93.160	ENSMAUG00000001286	Ythdc1	100	93.160	Mesocricetus_auratus
ENSAMEG00000005688	YTHDC1	100	96.617	ENSMICG00000034640	YTHDC1	100	96.617	Microcebus_murinus
ENSAMEG00000005688	YTHDC1	100	93.434	ENSMOCG00000020201	Ythdc1	100	93.434	Microtus_ochrogaster
ENSAMEG00000005688	YTHDC1	93	88.462	ENSMODG00000020754	-	92	88.757	Monodelphis_domestica
ENSAMEG00000005688	YTHDC1	64	58.511	ENSMODG00000009173	-	88	62.319	Monodelphis_domestica
ENSAMEG00000005688	YTHDC1	86	69.932	ENSMODG00000014337	-	95	70.960	Monodelphis_domestica
ENSAMEG00000005688	YTHDC1	96	51.989	ENSMODG00000010076	-	60	62.260	Monodelphis_domestica
ENSAMEG00000005688	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	68.378	Monopterus_albus
ENSAMEG00000005688	YTHDC1	93	93.787	MGP_CAROLIEiJ_G0027347	Ythdc1	97	91.439	Mus_caroli
ENSAMEG00000005688	YTHDC1	93	93.639	ENSMUSG00000035851	Ythdc1	93	92.899	Mus_musculus
ENSAMEG00000005688	YTHDC1	93	93.935	MGP_PahariEiJ_G0017126	Ythdc1	93	93.195	Mus_pahari
ENSAMEG00000005688	YTHDC1	93	93.935	MGP_SPRETEiJ_G0028339	Ythdc1	93	93.195	Mus_spretus
ENSAMEG00000005688	YTHDC1	93	74.227	ENSMPUG00000001743	YTHDC1	53	99.739	Mustela_putorius_furo
ENSAMEG00000005688	YTHDC1	99	98.194	ENSMLUG00000016300	YTHDC1	100	98.194	Myotis_lucifugus
ENSAMEG00000005688	YTHDC1	60	89.116	ENSNGAG00000024000	Ythdc1	93	88.235	Nannospalax_galili
ENSAMEG00000005688	YTHDC1	57	60.890	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSAMEG00000005688	YTHDC1	99	95.885	ENSNLEG00000009202	YTHDC1	99	95.885	Nomascus_leucogenys
ENSAMEG00000005688	YTHDC1	80	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSAMEG00000005688	YTHDC1	73	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSAMEG00000005688	YTHDC1	100	95.753	ENSODEG00000001715	YTHDC1	100	95.753	Octodon_degus
ENSAMEG00000005688	YTHDC1	67	75.000	ENSONIG00000012651	ythdc1	65	69.176	Oreochromis_niloticus
ENSAMEG00000005688	YTHDC1	88	76.336	ENSOANG00000014398	YTHDC1	55	95.443	Ornithorhynchus_anatinus
ENSAMEG00000005688	YTHDC1	93	82.032	ENSOCUG00000015886	YTHDC1	56	95.960	Oryctolagus_cuniculus
ENSAMEG00000005688	YTHDC1	57	61.149	ENSOMEG00000000551	ythdc1	60	64.977	Oryzias_melastigma
ENSAMEG00000005688	YTHDC1	100	96.990	ENSOGAG00000003362	YTHDC1	100	96.990	Otolemur_garnettii
ENSAMEG00000005688	YTHDC1	100	97.808	ENSOARG00000008633	YTHDC1	100	97.808	Ovis_aries
ENSAMEG00000005688	YTHDC1	100	96.346	ENSPPAG00000041315	YTHDC1	100	96.346	Pan_paniscus
ENSAMEG00000005688	YTHDC1	100	98.509	ENSPPRG00000011979	YTHDC1	100	98.509	Panthera_pardus
ENSAMEG00000005688	YTHDC1	99	98.214	ENSPTIG00000015527	YTHDC1	100	98.214	Panthera_tigris_altaica
ENSAMEG00000005688	YTHDC1	100	96.346	ENSPTRG00000016105	YTHDC1	100	96.346	Pan_troglodytes
ENSAMEG00000005688	YTHDC1	100	96.482	ENSPANG00000021590	YTHDC1	100	96.482	Papio_anubis
ENSAMEG00000005688	YTHDC1	78	83.803	ENSPKIG00000018497	ythdc1	93	69.465	Paramormyrops_kingsleyae
ENSAMEG00000005688	YTHDC1	91	86.527	ENSPSIG00000002782	YTHDC1	60	96.897	Pelodiscus_sinensis
ENSAMEG00000005688	YTHDC1	50	64.068	ENSPMGG00000000970	-	73	64.189	Periophthalmus_magnuspinnatus
ENSAMEG00000005688	YTHDC1	99	96.117	ENSPEMG00000013850	Ythdc1	100	96.117	Peromyscus_maniculatus_bairdii
ENSAMEG00000005688	YTHDC1	93	88.314	ENSPCIG00000006870	YTHDC1	92	88.609	Phascolarctos_cinereus
ENSAMEG00000005688	YTHDC1	60	58.887	ENSPLAG00000011079	ythdc1	85	64.989	Poecilia_latipinna
ENSAMEG00000005688	YTHDC1	57	60.000	ENSPMEG00000009238	ythdc1	60	64.989	Poecilia_mexicana
ENSAMEG00000005688	YTHDC1	70	59.952	ENSPREG00000016973	ythdc1	59	58.654	Poecilia_reticulata
ENSAMEG00000005688	YTHDC1	87	97.480	ENSPPYG00000014726	YTHDC1	100	97.480	Pongo_abelii
ENSAMEG00000005688	YTHDC1	77	88.636	ENSPCAG00000009607	YTHDC1	77	88.182	Procavia_capensis
ENSAMEG00000005688	YTHDC1	100	92.422	ENSPCOG00000019105	YTHDC1	100	92.422	Propithecus_coquereli
ENSAMEG00000005688	YTHDC1	100	96.306	ENSPVAG00000015551	YTHDC1	100	96.306	Pteropus_vampyrus
ENSAMEG00000005688	YTHDC1	57	60.780	ENSPNYG00000011687	ythdc1	59	66.133	Pundamilia_nyererei
ENSAMEG00000005688	YTHDC1	93	69.075	ENSPNAG00000028365	ythdc1	93	69.164	Pygocentrus_nattereri
ENSAMEG00000005688	YTHDC1	93	91.533	ENSRNOG00000001996	Ythdc1	93	92.117	Rattus_norvegicus
ENSAMEG00000005688	YTHDC1	99	95.342	ENSRBIG00000028279	YTHDC1	99	95.342	Rhinopithecus_bieti
ENSAMEG00000005688	YTHDC1	100	97.674	ENSRROG00000035028	YTHDC1	100	97.674	Rhinopithecus_roxellana
ENSAMEG00000005688	YTHDC1	100	96.752	ENSSBOG00000022353	YTHDC1	100	96.752	Saimiri_boliviensis_boliviensis
ENSAMEG00000005688	YTHDC1	93	87.278	ENSSHAG00000002538	YTHDC1	91	88.456	Sarcophilus_harrisii
ENSAMEG00000005688	YTHDC1	93	69.075	ENSSFOG00015003298	ythdc1	60	86.493	Scleropages_formosus
ENSAMEG00000005688	YTHDC1	56	60.762	ENSSMAG00000009086	ythdc1	60	65.747	Scophthalmus_maximus
ENSAMEG00000005688	YTHDC1	79	99.307	ENSSARG00000010960	YTHDC1	100	99.307	Sorex_araneus
ENSAMEG00000005688	YTHDC1	93	82.353	ENSSPUG00000009357	YTHDC1	62	96.200	Sphenodon_punctatus
ENSAMEG00000005688	YTHDC1	57	62.615	ENSSPAG00000011449	ythdc1	59	67.661	Stegastes_partitus
ENSAMEG00000005688	YTHDC1	99	98.199	ENSSSCG00000035505	YTHDC1	100	97.162	Sus_scrofa
ENSAMEG00000005688	YTHDC1	93	85.968	ENSTGUG00000004452	-	59	97.136	Taeniopygia_guttata
ENSAMEG00000005688	YTHDC1	92	47.826	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSAMEG00000005688	YTHDC1	87	60.738	ENSTNIG00000013243	ythdc1	89	66.047	Tetraodon_nigroviridis
ENSAMEG00000005688	YTHDC1	93	86.834	ENSTBEG00000011546	YTHDC1	92	87.130	Tupaia_belangeri
ENSAMEG00000005688	YTHDC1	100	97.945	ENSTTRG00000005083	YTHDC1	100	97.945	Tursiops_truncatus
ENSAMEG00000005688	YTHDC1	93	99.853	ENSUAMG00000010388	YTHDC1	100	99.853	Ursus_americanus
ENSAMEG00000005688	YTHDC1	99	84.882	ENSUMAG00000013668	YTHDC1	98	84.882	Ursus_maritimus
ENSAMEG00000005688	YTHDC1	100	95.205	ENSVPAG00000009040	YTHDC1	100	95.205	Vicugna_pacos
ENSAMEG00000005688	YTHDC1	99	98.628	ENSVVUG00000005387	YTHDC1	100	99.705	Vulpes_vulpes
ENSAMEG00000005688	YTHDC1	92	73.185	ENSXETG00000017960	ythdc1	91	71.429	Xenopus_tropicalis
ENSAMEG00000005688	YTHDC1	57	59.202	ENSXMAG00000005196	ythdc1	61	64.908	Xiphophorus_maculatus