EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000005807 (Gene tree)
Gene ID: 100470047
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 66072 bases
Position: chrGL193893.1:260668-326739
Accession: 100470047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000006164	RNA_pol_Rpb1_5	PF04998.17	4.7e-104	1	1
ENSAMEP00000006170	RNA_pol_Rpb1_4	PF05000.17	1.1e-25	1	1
ENSAMEP00000006164	RNA_pol_Rpb1_4	PF05000.17	1.4e-25	1	1
ENSAMEP00000006170	RNA_pol_Rpb1_2	PF00623.20	6.7e-71	1	1
ENSAMEP00000006164	RNA_pol_Rpb1_2	PF00623.20	1.9e-70	1	1
ENSAMEP00000006170	RNA_pol_Rpb1_3	PF04983.18	2.3e-37	1	1
ENSAMEP00000006164	RNA_pol_Rpb1_3	PF04983.18	4.9e-37	1	1
ENSAMEP00000006170	RNA_pol_Rpb1_1	PF04997.12	4.2e-22	1	1
ENSAMEP00000006164	RNA_pol_Rpb1_1	PF04997.12	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000006418	POLR1A-201	5148	-	ENSAMEP00000006164	1716 (aa)	XP_002928679	G1LGX3
ENSAMET00000006424	POLR1A-202	2931	-	ENSAMEP00000006170	976 (aa)	-	G1LGX9

Gene Model

Click here to download ENSAMEG00000005807's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000005807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000005807	POLR1A	63	31.548	ENSAMEG00000017801	POLR3A	70	31.548
ENSAMEG00000005807	POLR1A	69	35.238	ENSAMEG00000016265	-	59	35.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000005807	POLR1A	100	92.008	ENSG00000068654	POLR1A	100	90.872	Homo_sapiens
ENSAMEG00000005807	POLR1A	100	69.113	ENSAPOG00000017945	polr1a	99	68.350	Acanthochromis_polyacanthus
ENSAMEG00000005807	POLR1A	93	73.857	ENSACIG00000022147	polr1a	100	62.117	Amphilophus_citrinellus
ENSAMEG00000005807	POLR1A	94	76.048	ENSAOCG00000017336	polr1a	100	68.927	Amphiprion_ocellaris
ENSAMEG00000005807	POLR1A	100	69.521	ENSAPEG00000016105	polr1a	100	66.667	Amphiprion_percula
ENSAMEG00000005807	POLR1A	100	70.612	ENSATEG00000016773	polr1a	100	66.705	Anabas_testudineus
ENSAMEG00000005807	POLR1A	86	73.098	ENSAPLG00000013871	POLR1A	99	73.098	Anas_platyrhynchos
ENSAMEG00000005807	POLR1A	99	72.569	ENSACAG00000012141	POLR1A	99	68.906	Anolis_carolinensis
ENSAMEG00000005807	POLR1A	100	91.189	ENSANAG00000033927	POLR1A	100	89.529	Aotus_nancymaae
ENSAMEG00000005807	POLR1A	100	64.694	ENSACLG00000020541	polr1a	100	62.442	Astatotilapia_calliptera
ENSAMEG00000005807	POLR1A	100	92.316	ENSBTAG00000006481	POLR1A	100	91.497	Bos_taurus
ENSAMEG00000005807	POLR1A	99	38.616	WBGene00012999	rpoa-1	98	38.526	Caenorhabditis_elegans
ENSAMEG00000005807	POLR1A	100	90.574	ENSCJAG00000019547	POLR1A	100	89.535	Callithrix_jacchus
ENSAMEG00000005807	POLR1A	100	96.107	ENSCAFG00000007613	POLR1A	100	95.867	Canis_familiaris
ENSAMEG00000005807	POLR1A	100	96.311	ENSCAFG00020014752	POLR1A	100	95.647	Canis_lupus_dingo
ENSAMEG00000005807	POLR1A	100	92.623	ENSCHIG00000018204	POLR1A	99	90.997	Capra_hircus
ENSAMEG00000005807	POLR1A	100	90.061	ENSTSYG00000002761	POLR1A	100	88.941	Carlito_syrichta
ENSAMEG00000005807	POLR1A	95	89.355	ENSCAPG00000010132	POLR1A	100	84.510	Cavia_aperea
ENSAMEG00000005807	POLR1A	100	91.803	ENSCPOG00000012350	POLR1A	100	89.244	Cavia_porcellus
ENSAMEG00000005807	POLR1A	100	91.393	ENSCCAG00000019839	POLR1A	100	89.709	Cebus_capucinus
ENSAMEG00000005807	POLR1A	100	92.725	ENSCATG00000029786	POLR1A	100	91.337	Cercocebus_atys
ENSAMEG00000005807	POLR1A	100	91.598	ENSCLAG00000005187	POLR1A	100	88.863	Chinchilla_lanigera
ENSAMEG00000005807	POLR1A	100	92.623	ENSCSAG00000016251	POLR1A	100	91.289	Chlorocebus_sabaeus
ENSAMEG00000005807	POLR1A	84	93.289	ENSCHOG00000003766	-	84	96.471	Choloepus_hoffmanni
ENSAMEG00000005807	POLR1A	99	78.769	ENSCPBG00000001115	POLR1A	99	74.680	Chrysemys_picta_bellii
ENSAMEG00000005807	POLR1A	100	49.147	ENSCSAVG00000007184	-	91	55.087	Ciona_savignyi
ENSAMEG00000005807	POLR1A	100	88.030	ENSCANG00000031785	POLR1A	100	87.972	Colobus_angolensis_palliatus
ENSAMEG00000005807	POLR1A	100	82.957	ENSCGRG00001006651	Polr1a	100	83.130	Cricetulus_griseus_chok1gshd
ENSAMEG00000005807	POLR1A	60	85.853	ENSCGRG00000010834	Polr1a	100	86.434	Cricetulus_griseus_crigri
ENSAMEG00000005807	POLR1A	100	65.816	ENSCSEG00000020190	polr1a	100	62.369	Cynoglossus_semilaevis
ENSAMEG00000005807	POLR1A	100	69.663	ENSCVAG00000020941	polr1a	100	64.401	Cyprinodon_variegatus
ENSAMEG00000005807	POLR1A	100	70.245	ENSDARG00000098375	polr1a	100	66.938	Danio_rerio
ENSAMEG00000005807	POLR1A	100	87.807	ENSDNOG00000010829	POLR1A	100	83.749	Dasypus_novemcinctus
ENSAMEG00000005807	POLR1A	100	89.126	ENSDORG00000008298	Polr1a	100	88.413	Dipodomys_ordii
ENSAMEG00000005807	POLR1A	99	43.967	FBgn0019938	RpI1	99	43.935	Drosophila_melanogaster
ENSAMEG00000005807	POLR1A	88	88.073	ENSETEG00000000412	-	72	96.875	Echinops_telfairi
ENSAMEG00000005807	POLR1A	81	67.442	ENSEBUG00000005667	-	99	47.776	Eptatretus_burgeri
ENSAMEG00000005807	POLR1A	100	94.877	ENSEASG00005001625	POLR1A	100	94.012	Equus_asinus_asinus
ENSAMEG00000005807	POLR1A	100	94.672	ENSECAG00000030510	-	100	95.738	Equus_caballus
ENSAMEG00000005807	POLR1A	100	94.672	ENSECAG00000010092	POLR1A	100	95.738	Equus_caballus
ENSAMEG00000005807	POLR1A	100	94.672	ENSECAG00000036306	-	100	95.738	Equus_caballus
ENSAMEG00000005807	POLR1A	85	94.940	ENSEEUG00000000676	POLR1A	85	94.940	Erinaceus_europaeus
ENSAMEG00000005807	POLR1A	100	71.209	ENSELUG00000012769	polr1a	99	66.628	Esox_lucius
ENSAMEG00000005807	POLR1A	100	96.004	ENSFCAG00000008966	POLR1A	100	94.878	Felis_catus
ENSAMEG00000005807	POLR1A	98	74.896	ENSFALG00000010082	POLR1A	99	71.070	Ficedula_albicollis
ENSAMEG00000005807	POLR1A	100	91.701	ENSFDAG00000013726	POLR1A	100	88.960	Fukomys_damarensis
ENSAMEG00000005807	POLR1A	100	66.086	ENSFHEG00000005996	polr1a	100	62.319	Fundulus_heteroclitus
ENSAMEG00000005807	POLR1A	100	61.373	ENSGMOG00000002230	polr1a	100	59.285	Gadus_morhua
ENSAMEG00000005807	POLR1A	100	74.566	ENSGALG00000038160	-	99	70.032	Gallus_gallus
ENSAMEG00000005807	POLR1A	100	67.416	ENSGAFG00000015266	polr1a	100	63.841	Gambusia_affinis
ENSAMEG00000005807	POLR1A	100	69.663	ENSGACG00000018791	polr1a	100	65.227	Gasterosteus_aculeatus
ENSAMEG00000005807	POLR1A	89	76.234	ENSGAGG00000004984	-	96	82.174	Gopherus_agassizii
ENSAMEG00000005807	POLR1A	100	92.213	ENSGGOG00000001788	POLR1A	100	90.814	Gorilla_gorilla
ENSAMEG00000005807	POLR1A	100	66.224	ENSHBUG00000020021	polr1a	99	65.548	Haplochromis_burtoni
ENSAMEG00000005807	POLR1A	100	91.803	ENSHGLG00000006334	POLR1A	100	89.593	Heterocephalus_glaber_female
ENSAMEG00000005807	POLR1A	100	91.335	ENSHGLG00100006614	POLR1A	100	89.333	Heterocephalus_glaber_male
ENSAMEG00000005807	POLR1A	100	63.571	ENSHCOG00000003345	polr1a	100	62.688	Hippocampus_comes
ENSAMEG00000005807	POLR1A	100	69.623	ENSIPUG00000013174	polr1a	100	65.876	Ictalurus_punctatus
ENSAMEG00000005807	POLR1A	100	90.676	ENSSTOG00000012580	POLR1A	100	87.544	Ictidomys_tridecemlineatus
ENSAMEG00000005807	POLR1A	100	90.286	ENSJJAG00000013113	Polr1a	100	87.573	Jaculus_jaculus
ENSAMEG00000005807	POLR1A	100	69.089	ENSKMAG00000007399	polr1a	100	65.641	Kryptolebias_marmoratus
ENSAMEG00000005807	POLR1A	90	76.042	ENSLBEG00000015401	polr1a	99	68.392	Labrus_bergylta
ENSAMEG00000005807	POLR1A	94	77.015	ENSLACG00000003218	polr1a	99	77.158	Latimeria_chalumnae
ENSAMEG00000005807	POLR1A	100	75.178	ENSLOCG00000010881	polr1a	100	71.031	Lepisosteus_oculatus
ENSAMEG00000005807	POLR1A	100	92.418	ENSLAFG00000014948	POLR1A	100	89.901	Loxodonta_africana
ENSAMEG00000005807	POLR1A	100	92.623	ENSMFAG00000046097	POLR1A	100	91.628	Macaca_fascicularis
ENSAMEG00000005807	POLR1A	100	92.520	ENSMMUG00000015815	POLR1A	100	91.512	Macaca_mulatta
ENSAMEG00000005807	POLR1A	100	92.623	ENSMNEG00000043313	POLR1A	100	91.628	Macaca_nemestrina
ENSAMEG00000005807	POLR1A	100	92.520	ENSMLEG00000042428	POLR1A	100	90.814	Mandrillus_leucophaeus
ENSAMEG00000005807	POLR1A	100	70.215	ENSMAMG00000016565	polr1a	100	66.143	Mastacembelus_armatus
ENSAMEG00000005807	POLR1A	100	69.113	ENSMZEG00005004915	polr1a	100	65.972	Maylandia_zebra
ENSAMEG00000005807	POLR1A	100	74.385	ENSMGAG00000013111	POLR1A	99	69.200	Meleagris_gallopavo
ENSAMEG00000005807	POLR1A	92	87.468	ENSMAUG00000008497	Polr1a	100	88.101	Mesocricetus_auratus
ENSAMEG00000005807	POLR1A	100	92.213	ENSMICG00000000757	POLR1A	100	90.703	Microcebus_murinus
ENSAMEG00000005807	POLR1A	100	90.369	ENSMOCG00000000122	Polr1a	100	88.225	Microtus_ochrogaster
ENSAMEG00000005807	POLR1A	100	69.775	ENSMMOG00000010216	polr1a	100	65.288	Mola_mola
ENSAMEG00000005807	POLR1A	100	81.837	ENSMODG00000009335	POLR1A	100	75.201	Monodelphis_domestica
ENSAMEG00000005807	POLR1A	100	70.113	ENSMALG00000013363	polr1a	100	66.164	Monopterus_albus
ENSAMEG00000005807	POLR1A	100	88.525	MGP_CAROLIEiJ_G0028494	Polr1a	100	86.477	Mus_caroli
ENSAMEG00000005807	POLR1A	100	88.730	ENSMUSG00000049553	Polr1a	100	86.361	Mus_musculus
ENSAMEG00000005807	POLR1A	100	89.447	MGP_PahariEiJ_G0022230	Polr1a	100	87.348	Mus_pahari
ENSAMEG00000005807	POLR1A	100	88.627	MGP_SPRETEiJ_G0029499	Polr1a	100	85.192	Mus_spretus
ENSAMEG00000005807	POLR1A	100	96.824	ENSMPUG00000009135	POLR1A	100	95.634	Mustela_putorius_furo
ENSAMEG00000005807	POLR1A	100	93.558	ENSMLUG00000015723	POLR1A	100	90.735	Myotis_lucifugus
ENSAMEG00000005807	POLR1A	100	90.984	ENSNGAG00000017907	Polr1a	100	88.290	Nannospalax_galili
ENSAMEG00000005807	POLR1A	100	69.011	ENSNBRG00000000519	polr1a	100	66.088	Neolamprologus_brichardi
ENSAMEG00000005807	POLR1A	100	90.881	ENSNLEG00000002264	POLR1A	100	88.773	Nomascus_leucogenys
ENSAMEG00000005807	POLR1A	81	90.000	ENSMEUG00000011665	-	75	92.126	Notamacropus_eugenii
ENSAMEG00000005807	POLR1A	99	85.361	ENSOPRG00000008269	POLR1A	100	83.294	Ochotona_princeps
ENSAMEG00000005807	POLR1A	100	92.316	ENSODEG00000003542	POLR1A	100	89.483	Octodon_degus
ENSAMEG00000005807	POLR1A	100	69.348	ENSONIG00000015895	polr1a	100	65.990	Oreochromis_niloticus
ENSAMEG00000005807	POLR1A	74	70.396	ENSOANG00000012384	-	100	70.668	Ornithorhynchus_anatinus
ENSAMEG00000005807	POLR1A	100	92.213	ENSOCUG00000010138	POLR1A	100	90.529	Oryctolagus_cuniculus
ENSAMEG00000005807	POLR1A	100	68.298	ENSORLG00000008753	polr1a	99	65.099	Oryzias_latipes
ENSAMEG00000005807	POLR1A	100	67.074	ENSORLG00020020726	polr1a	99	63.879	Oryzias_latipes_hni
ENSAMEG00000005807	POLR1A	96	74.468	ENSORLG00015016071	polr1a	99	74.444	Oryzias_latipes_hsok
ENSAMEG00000005807	POLR1A	100	90.779	ENSOGAG00000004031	POLR1A	100	89.709	Otolemur_garnettii
ENSAMEG00000005807	POLR1A	100	91.922	ENSOARG00000020601	POLR1A	100	91.347	Ovis_aries
ENSAMEG00000005807	POLR1A	100	91.803	ENSPPAG00000042450	POLR1A	100	90.581	Pan_paniscus
ENSAMEG00000005807	POLR1A	100	95.902	ENSPPRG00000006702	POLR1A	100	95.169	Panthera_pardus
ENSAMEG00000005807	POLR1A	100	94.908	ENSPTIG00000018783	POLR1A	100	94.606	Panthera_tigris_altaica
ENSAMEG00000005807	POLR1A	100	91.598	ENSPTRG00000012147	POLR1A	100	90.523	Pan_troglodytes
ENSAMEG00000005807	POLR1A	100	92.520	ENSPANG00000025908	POLR1A	100	91.221	Papio_anubis
ENSAMEG00000005807	POLR1A	100	71.443	ENSPKIG00000005468	polr1a	99	76.389	Paramormyrops_kingsleyae
ENSAMEG00000005807	POLR1A	63	72.601	ENSPSIG00000009321	-	99	71.521	Pelodiscus_sinensis
ENSAMEG00000005807	POLR1A	97	68.187	ENSPMGG00000009718	polr1a	95	68.590	Periophthalmus_magnuspinnatus
ENSAMEG00000005807	POLR1A	100	91.393	ENSPEMG00000022224	Polr1a	100	88.805	Peromyscus_maniculatus_bairdii
ENSAMEG00000005807	POLR1A	100	82.909	ENSPCIG00000004222	POLR1A	99	79.281	Phascolarctos_cinereus
ENSAMEG00000005807	POLR1A	100	68.163	ENSPFOG00000005025	polr1a	100	64.771	Poecilia_formosa
ENSAMEG00000005807	POLR1A	100	68.367	ENSPLAG00000021389	polr1a	100	64.962	Poecilia_latipinna
ENSAMEG00000005807	POLR1A	100	66.018	ENSPMEG00000006463	polr1a	100	63.185	Poecilia_mexicana
ENSAMEG00000005807	POLR1A	100	68.469	ENSPREG00000002389	polr1a	100	64.750	Poecilia_reticulata
ENSAMEG00000005807	POLR1A	100	90.779	ENSPPYG00000012217	POLR1A	100	90.233	Pongo_abelii
ENSAMEG00000005807	POLR1A	93	88.000	ENSPCAG00000011582	POLR1A	92	88.000	Procavia_capensis
ENSAMEG00000005807	POLR1A	100	91.906	ENSPCOG00000026987	POLR1A	100	90.587	Propithecus_coquereli
ENSAMEG00000005807	POLR1A	95	93.382	ENSPVAG00000012674	POLR1A	95	92.933	Pteropus_vampyrus
ENSAMEG00000005807	POLR1A	100	69.113	ENSPNYG00000000026	polr1a	100	65.972	Pundamilia_nyererei
ENSAMEG00000005807	POLR1A	100	70.133	ENSPNAG00000019223	polr1a	99	68.493	Pygocentrus_nattereri
ENSAMEG00000005807	POLR1A	100	89.959	ENSRNOG00000009545	Polr1a	100	87.986	Rattus_norvegicus
ENSAMEG00000005807	POLR1A	100	91.701	ENSRBIG00000028335	POLR1A	100	90.708	Rhinopithecus_bieti
ENSAMEG00000005807	POLR1A	100	91.598	ENSRROG00000031473	POLR1A	100	90.650	Rhinopithecus_roxellana
ENSAMEG00000005807	POLR1A	99	39.279	YOR341W	RPA190	99	36.471	Saccharomyces_cerevisiae
ENSAMEG00000005807	POLR1A	100	91.291	ENSSBOG00000030262	POLR1A	100	89.315	Saimiri_boliviensis_boliviensis
ENSAMEG00000005807	POLR1A	100	74.516	ENSSHAG00000014739	POLR1A	100	73.903	Sarcophilus_harrisii
ENSAMEG00000005807	POLR1A	100	73.156	ENSSFOG00015019716	polr1a	100	67.984	Scleropages_formosus
ENSAMEG00000005807	POLR1A	100	69.867	ENSSMAG00000014342	polr1a	100	66.261	Scophthalmus_maximus
ENSAMEG00000005807	POLR1A	100	69.623	ENSSDUG00000014631	polr1a	100	66.628	Seriola_dumerili
ENSAMEG00000005807	POLR1A	100	66.497	ENSSLDG00000024095	polr1a	100	64.462	Seriola_lalandi_dorsalis
ENSAMEG00000005807	POLR1A	75	98.936	ENSSARG00000003136	-	76	98.936	Sorex_araneus
ENSAMEG00000005807	POLR1A	100	76.915	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSAMEG00000005807	POLR1A	89	76.551	ENSSPAG00000016341	polr1a	94	73.016	Stegastes_partitus
ENSAMEG00000005807	POLR1A	100	92.725	ENSSSCG00000008226	POLR1A	99	92.551	Sus_scrofa
ENSAMEG00000005807	POLR1A	98	74.214	ENSTGUG00000010704	POLR1A	100	70.713	Taeniopygia_guttata
ENSAMEG00000005807	POLR1A	100	68.303	ENSTRUG00000002210	polr1a	99	64.153	Takifugu_rubripes
ENSAMEG00000005807	POLR1A	100	64.496	ENSTNIG00000010116	polr1a	100	60.277	Tetraodon_nigroviridis
ENSAMEG00000005807	POLR1A	74	96.460	ENSTBEG00000008646	POLR1A	74	96.460	Tupaia_belangeri
ENSAMEG00000005807	POLR1A	100	90.164	ENSTTRG00000008597	POLR1A	100	88.695	Tursiops_truncatus
ENSAMEG00000005807	POLR1A	69	98.730	ENSUAMG00000012158	-	94	98.730	Ursus_americanus
ENSAMEG00000005807	POLR1A	100	97.730	ENSUMAG00000006700	POLR1A	100	97.730	Ursus_maritimus
ENSAMEG00000005807	POLR1A	100	95.902	ENSVVUG00000001245	POLR1A	100	95.693	Vulpes_vulpes
ENSAMEG00000005807	POLR1A	100	71.371	ENSXETG00000001952	polr1a	100	69.811	Xenopus_tropicalis
ENSAMEG00000005807	POLR1A	80	65.096	ENSXCOG00000013384	polr1a	92	74.542	Xiphophorus_couchianus
ENSAMEG00000005807	POLR1A	100	68.265	ENSXMAG00000004032	polr1a	100	64.719	Xiphophorus_maculatus