EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000005834 (Gene tree)
Gene ID: 100478192
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 93009 bases
Position: chrGL194184.1:148140-241148
Accession: 100478192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000006167	ResIII	PF04851.15	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000006421	-	2736	XM_002929425	ENSAMEP00000006167	911 (aa)	XP_002929471	G1LGX6

Gene Model

Click here to download ENSAMEG00000005834's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000005834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000005834	-	52	34.300	ENSAMEG00000013525	HELLS	53	34.300
ENSAMEG00000005834	-	77	42.047	ENSAMEG00000013902	RAD54L	92	42.047
ENSAMEG00000005834	-	55	31.528	ENSAMEG00000017063	CHD1L	50	31.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000005834	-	80	90.621	ENSG00000265817	FSBP	99	90.621	Homo_sapiens
ENSAMEG00000005834	-	99	87.692	ENSG00000197275	RAD54B	99	87.692	Homo_sapiens
ENSAMEG00000005834	-	99	54.565	ENSACIG00000013005	rad54b	99	54.565	Amphilophus_citrinellus
ENSAMEG00000005834	-	99	55.579	ENSAOCG00000008523	rad54b	99	55.579	Amphiprion_ocellaris
ENSAMEG00000005834	-	99	55.049	ENSAPEG00000001673	rad54b	99	55.157	Amphiprion_percula
ENSAMEG00000005834	-	99	54.317	ENSATEG00000001527	rad54b	99	54.317	Anabas_testudineus
ENSAMEG00000005834	-	99	68.852	ENSAPLG00000014366	-	99	68.852	Anas_platyrhynchos
ENSAMEG00000005834	-	87	71.843	ENSACAG00000003671	-	99	71.843	Anolis_carolinensis
ENSAMEG00000005834	-	71	87.963	ENSANAG00000019528	-	99	87.963	Aotus_nancymaae
ENSAMEG00000005834	-	99	54.148	ENSACLG00000007826	rad54b	99	54.148	Astatotilapia_calliptera
ENSAMEG00000005834	-	85	57.634	ENSAMXG00000039985	rad54b	94	57.503	Astyanax_mexicanus
ENSAMEG00000005834	-	100	87.706	ENSBTAG00000000632	RAD54B	100	87.706	Bos_taurus
ENSAMEG00000005834	-	80	34.621	WBGene00013792	Y116A8C.13	84	34.828	Caenorhabditis_elegans
ENSAMEG00000005834	-	99	85.730	ENSCJAG00000000080	-	99	88.690	Callithrix_jacchus
ENSAMEG00000005834	-	100	92.975	ENSCAFG00000009179	RAD54B	99	92.975	Canis_familiaris
ENSAMEG00000005834	-	100	93.085	ENSCAFG00020012084	-	99	93.085	Canis_lupus_dingo
ENSAMEG00000005834	-	100	87.267	ENSCHIG00000008230	-	100	87.267	Capra_hircus
ENSAMEG00000005834	-	100	85.950	ENSTSYG00000013234	-	100	85.950	Carlito_syrichta
ENSAMEG00000005834	-	100	82.547	ENSCPOG00000011643	-	99	82.547	Cavia_porcellus
ENSAMEG00000005834	-	99	85.730	ENSCCAG00000011754	-	99	88.690	Cebus_capucinus
ENSAMEG00000005834	-	99	86.813	ENSCATG00000030661	-	99	90.069	Cercocebus_atys
ENSAMEG00000005834	-	99	83.516	ENSCLAG00000010476	-	99	83.516	Chinchilla_lanigera
ENSAMEG00000005834	-	99	86.703	ENSCSAG00000012712	-	99	86.703	Chlorocebus_sabaeus
ENSAMEG00000005834	-	99	69.499	ENSCPBG00000003204	-	99	69.858	Chrysemys_picta_bellii
ENSAMEG00000005834	-	99	87.143	ENSCANG00000017939	-	99	90.207	Colobus_angolensis_palliatus
ENSAMEG00000005834	-	100	78.970	ENSCGRG00001020184	Rad54b	100	78.970	Cricetulus_griseus_chok1gshd
ENSAMEG00000005834	-	100	77.766	ENSCGRG00000016752	Rad54b	100	77.766	Cricetulus_griseus_crigri
ENSAMEG00000005834	-	86	58.638	ENSCSEG00000001601	rad54b	93	58.638	Cynoglossus_semilaevis
ENSAMEG00000005834	-	99	56.446	ENSCVAG00000009200	rad54b	99	56.446	Cyprinodon_variegatus
ENSAMEG00000005834	-	100	53.276	ENSDARG00000092134	rad54b	100	60.276	Danio_rerio
ENSAMEG00000005834	-	99	84.464	ENSDNOG00000015535	-	99	84.464	Dasypus_novemcinctus
ENSAMEG00000005834	-	100	82.456	ENSDORG00000002492	Rad54b	100	82.456	Dipodomys_ordii
ENSAMEG00000005834	-	87	82.025	ENSETEG00000010605	-	100	82.025	Echinops_telfairi
ENSAMEG00000005834	-	99	47.267	ENSEBUG00000009104	rad54b	98	47.172	Eptatretus_burgeri
ENSAMEG00000005834	-	97	88.701	ENSEASG00005004021	-	100	88.701	Equus_asinus_asinus
ENSAMEG00000005834	-	100	89.035	ENSECAG00000021949	-	99	89.035	Equus_caballus
ENSAMEG00000005834	-	83	83.851	ENSEEUG00000008056	-	83	83.851	Erinaceus_europaeus
ENSAMEG00000005834	-	99	54.025	ENSELUG00000009287	rad54b	99	54.025	Esox_lucius
ENSAMEG00000005834	-	100	93.963	ENSFCAG00000015513	-	100	95.179	Felis_catus
ENSAMEG00000005834	-	99	67.679	ENSFALG00000005467	-	99	67.679	Ficedula_albicollis
ENSAMEG00000005834	-	99	84.396	ENSFDAG00000020541	-	100	84.396	Fukomys_damarensis
ENSAMEG00000005834	-	89	57.369	ENSFHEG00000014382	rad54b	90	57.073	Fundulus_heteroclitus
ENSAMEG00000005834	-	86	56.875	ENSGMOG00000014774	rad54b	98	56.875	Gadus_morhua
ENSAMEG00000005834	-	99	67.394	ENSGALG00000043597	RAD54B	99	67.394	Gallus_gallus
ENSAMEG00000005834	-	99	55.786	ENSGAFG00000007901	rad54b	99	55.786	Gambusia_affinis
ENSAMEG00000005834	-	99	55.508	ENSGACG00000009128	rad54b	99	55.508	Gasterosteus_aculeatus
ENSAMEG00000005834	-	99	69.399	ENSGAGG00000018747	-	99	69.399	Gopherus_agassizii
ENSAMEG00000005834	-	100	87.267	ENSGGOG00000023516	-	100	87.267	Gorilla_gorilla
ENSAMEG00000005834	-	99	54.158	ENSHBUG00000016017	rad54b	99	54.158	Haplochromis_burtoni
ENSAMEG00000005834	-	100	84.096	ENSHGLG00000008263	RAD54B	99	84.096	Heterocephalus_glaber_female
ENSAMEG00000005834	-	100	83.117	ENSHGLG00100008108	-	99	83.117	Heterocephalus_glaber_male
ENSAMEG00000005834	-	99	53.139	ENSHCOG00000004764	rad54b	99	55.060	Hippocampus_comes
ENSAMEG00000005834	-	100	52.426	ENSIPUG00000018531	rad54b	99	52.637	Ictalurus_punctatus
ENSAMEG00000005834	-	99	83.554	ENSSTOG00000010791	-	99	83.554	Ictidomys_tridecemlineatus
ENSAMEG00000005834	-	100	81.689	ENSJJAG00000010314	Rad54b	100	81.689	Jaculus_jaculus
ENSAMEG00000005834	-	99	53.821	ENSKMAG00000004744	rad54b	99	53.821	Kryptolebias_marmoratus
ENSAMEG00000005834	-	82	69.519	ENSLACG00000000859	-	100	69.519	Latimeria_chalumnae
ENSAMEG00000005834	-	99	57.754	ENSLOCG00000010100	rad54b	94	63.522	Lepisosteus_oculatus
ENSAMEG00000005834	-	89	85.661	ENSLAFG00000015315	-	100	85.661	Loxodonta_africana
ENSAMEG00000005834	-	99	86.703	ENSMFAG00000031629	-	99	89.793	Macaca_fascicularis
ENSAMEG00000005834	-	99	86.703	ENSMMUG00000005659	-	99	86.703	Macaca_mulatta
ENSAMEG00000005834	-	99	86.703	ENSMNEG00000016408	-	99	86.703	Macaca_nemestrina
ENSAMEG00000005834	-	99	86.923	ENSMLEG00000006946	-	99	86.923	Mandrillus_leucophaeus
ENSAMEG00000005834	-	99	55.483	ENSMAMG00000012269	rad54b	99	55.483	Mastacembelus_armatus
ENSAMEG00000005834	-	99	54.158	ENSMZEG00005005281	rad54b	95	59.395	Maylandia_zebra
ENSAMEG00000005834	-	99	67.538	ENSMGAG00000012024	-	99	67.538	Meleagris_gallopavo
ENSAMEG00000005834	-	100	78.204	ENSMAUG00000013586	Rad54b	100	78.204	Mesocricetus_auratus
ENSAMEG00000005834	-	99	83.407	ENSMICG00000000754	-	99	83.407	Microcebus_murinus
ENSAMEG00000005834	-	100	77.571	ENSMOCG00000020035	Rad54b	99	77.571	Microtus_ochrogaster
ENSAMEG00000005834	-	99	53.871	ENSMMOG00000003394	rad54b	99	53.871	Mola_mola
ENSAMEG00000005834	-	88	77.114	ENSMODG00000007343	-	99	77.114	Monodelphis_domestica
ENSAMEG00000005834	-	71	60.155	ENSMALG00000001520	rad54b	99	60.155	Monopterus_albus
ENSAMEG00000005834	-	100	79.189	MGP_CAROLIEiJ_G0025810	Rad54b	100	79.189	Mus_caroli
ENSAMEG00000005834	-	100	78.728	ENSMUSG00000078773	Rad54b	100	78.728	Mus_musculus
ENSAMEG00000005834	-	100	79.299	MGP_PahariEiJ_G0023933	Rad54b	100	79.299	Mus_pahari
ENSAMEG00000005834	-	100	79.276	MGP_SPRETEiJ_G0026758	Rad54b	100	79.276	Mus_spretus
ENSAMEG00000005834	-	89	94.938	ENSMPUG00000008878	-	100	94.938	Mustela_putorius_furo
ENSAMEG00000005834	-	99	85.965	ENSMLUG00000008953	-	99	85.965	Myotis_lucifugus
ENSAMEG00000005834	-	100	82.244	ENSNGAG00000017537	Rad54b	100	82.244	Nannospalax_galili
ENSAMEG00000005834	-	99	54.367	ENSNBRG00000013394	rad54b	99	54.367	Neolamprologus_brichardi
ENSAMEG00000005834	-	99	87.473	ENSNLEG00000003062	-	99	90.483	Nomascus_leucogenys
ENSAMEG00000005834	-	82	74.180	ENSMEUG00000012426	-	82	74.180	Notamacropus_eugenii
ENSAMEG00000005834	-	100	82.127	ENSODEG00000019564	-	100	82.127	Octodon_degus
ENSAMEG00000005834	-	89	78.863	ENSODEG00000002650	-	96	85.846	Octodon_degus
ENSAMEG00000005834	-	99	55.011	ENSONIG00000006067	rad54b	99	55.011	Oreochromis_niloticus
ENSAMEG00000005834	-	83	76.361	ENSOANG00000011348	-	100	76.361	Ornithorhynchus_anatinus
ENSAMEG00000005834	-	100	83.662	ENSOCUG00000016478	-	99	83.662	Oryctolagus_cuniculus
ENSAMEG00000005834	-	99	55.132	ENSORLG00000008918	rad54b	99	62.906	Oryzias_latipes
ENSAMEG00000005834	-	71	62.906	ENSORLG00020012171	rad54b	99	62.906	Oryzias_latipes_hni
ENSAMEG00000005834	-	99	55.000	ENSORLG00015018536	rad54b	99	55.000	Oryzias_latipes_hsok
ENSAMEG00000005834	-	84	60.387	ENSOMEG00000004345	rad54b	99	60.387	Oryzias_melastigma
ENSAMEG00000005834	-	99	85.401	ENSOGAG00000007854	-	99	85.401	Otolemur_garnettii
ENSAMEG00000005834	-	89	89.545	ENSOARG00000007691	-	100	89.545	Ovis_aries
ENSAMEG00000005834	-	99	86.044	ENSPPAG00000029572	-	99	86.044	Pan_paniscus
ENSAMEG00000005834	-	100	93.963	ENSPPRG00000007571	-	100	95.317	Panthera_pardus
ENSAMEG00000005834	-	80	95.317	ENSPTIG00000012670	-	100	95.317	Panthera_tigris_altaica
ENSAMEG00000005834	-	99	87.473	ENSPTRG00000020427	-	99	90.483	Pan_troglodytes
ENSAMEG00000005834	-	99	87.033	ENSPANG00000019566	-	99	87.033	Papio_anubis
ENSAMEG00000005834	-	99	58.568	ENSPKIG00000014974	rad54b	99	58.568	Paramormyrops_kingsleyae
ENSAMEG00000005834	-	99	67.721	ENSPSIG00000002383	-	97	72.898	Pelodiscus_sinensis
ENSAMEG00000005834	-	100	79.737	ENSPEMG00000012133	Rad54b	100	79.737	Peromyscus_maniculatus_bairdii
ENSAMEG00000005834	-	86	58.177	ENSPMAG00000002916	rad54b	99	58.427	Petromyzon_marinus
ENSAMEG00000005834	-	89	77.160	ENSPCIG00000020151	-	94	77.625	Phascolarctos_cinereus
ENSAMEG00000005834	-	99	55.319	ENSPFOG00000023411	rad54b	99	55.319	Poecilia_formosa
ENSAMEG00000005834	-	99	55.319	ENSPLAG00000010430	rad54b	99	55.319	Poecilia_latipinna
ENSAMEG00000005834	-	99	55.165	ENSPMEG00000016873	rad54b	95	59.556	Poecilia_mexicana
ENSAMEG00000005834	-	99	56.489	ENSPREG00000018443	rad54b	99	56.489	Poecilia_reticulata
ENSAMEG00000005834	-	99	87.253	ENSPPYG00000018750	-	99	87.253	Pongo_abelii
ENSAMEG00000005834	-	99	87.816	ENSPCOG00000026845	-	99	89.931	Propithecus_coquereli
ENSAMEG00000005834	-	87	90.283	ENSPVAG00000000261	-	92	90.283	Pteropus_vampyrus
ENSAMEG00000005834	-	86	59.446	ENSPNYG00000018303	rad54b	96	59.446	Pundamilia_nyererei
ENSAMEG00000005834	-	99	53.888	ENSPNAG00000000295	rad54b	99	53.888	Pygocentrus_nattereri
ENSAMEG00000005834	-	100	75.685	ENSRNOG00000039949	Rad54b	100	75.685	Rattus_norvegicus
ENSAMEG00000005834	-	99	86.374	ENSRBIG00000020419	-	99	86.374	Rhinopithecus_bieti
ENSAMEG00000005834	-	99	86.374	ENSRROG00000039897	-	99	86.374	Rhinopithecus_roxellana
ENSAMEG00000005834	-	62	41.883	YBR073W	RDH54	61	41.883	Saccharomyces_cerevisiae
ENSAMEG00000005834	-	99	85.620	ENSSBOG00000028501	-	99	85.620	Saimiri_boliviensis_boliviensis
ENSAMEG00000005834	-	99	73.275	ENSSHAG00000017038	-	99	73.275	Sarcophilus_harrisii
ENSAMEG00000005834	-	65	64.966	ENSSFOG00015008483	rad54b	91	64.966	Scleropages_formosus
ENSAMEG00000005834	-	99	54.057	ENSSMAG00000018659	rad54b	99	54.386	Scophthalmus_maximus
ENSAMEG00000005834	-	99	54.313	ENSSDUG00000001122	rad54b	98	54.313	Seriola_dumerili
ENSAMEG00000005834	-	99	54.162	ENSSLDG00000013787	rad54b	99	54.162	Seriola_lalandi_dorsalis
ENSAMEG00000005834	-	99	67.908	ENSSPUG00000016497	-	99	67.908	Sphenodon_punctatus
ENSAMEG00000005834	-	99	55.592	ENSSPAG00000012800	rad54b	99	55.592	Stegastes_partitus
ENSAMEG00000005834	-	99	86.374	ENSSSCG00000006101	-	99	90.250	Sus_scrofa
ENSAMEG00000005834	-	99	67.682	ENSTGUG00000011880	-	99	67.682	Taeniopygia_guttata
ENSAMEG00000005834	-	99	53.765	ENSTRUG00000010015	rad54b	99	53.765	Takifugu_rubripes
ENSAMEG00000005834	-	100	84.523	ENSTTRG00000006312	-	100	84.523	Tursiops_truncatus
ENSAMEG00000005834	-	100	98.353	ENSUMAG00000016401	-	100	98.353	Ursus_maritimus
ENSAMEG00000005834	-	100	86.828	ENSVPAG00000003157	-	100	86.828	Vicugna_pacos
ENSAMEG00000005834	-	99	55.763	ENSXETG00000025924	rad54b	99	59.776	Xenopus_tropicalis
ENSAMEG00000005834	-	99	55.495	ENSXMAG00000013141	rad54b	99	55.495	Xiphophorus_maculatus