EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000005852 (Gene tree)
Gene ID: 100475772
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 108435 bases
Position: chrGL192340.1:1347006-1455440
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000006180	PPR	PF01535.20	1.8e-32	1	6
ENSAMEP00000006180	PPR	PF01535.20	1.8e-32	2	6
ENSAMEP00000006180	PPR	PF01535.20	1.8e-32	3	6
ENSAMEP00000006180	PPR	PF01535.20	1.8e-32	4	6
ENSAMEP00000006180	PPR	PF01535.20	1.8e-32	5	6
ENSAMEP00000006180	PPR	PF01535.20	1.8e-32	6	6
ENSAMEP00000006174	PPR	PF01535.20	3.7e-20	1	3
ENSAMEP00000006174	PPR	PF01535.20	3.7e-20	2	3
ENSAMEP00000006174	PPR	PF01535.20	3.7e-20	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000006428	LRPPRC-201	2505	-	ENSAMEP00000006174	835 (aa)	-	G1LGY3
ENSAMET00000006434	LRPPRC-202	4095	-	ENSAMEP00000006180	1365 (aa)	-	G1LGY9

Gene Model

Click here to download ENSAMEG00000005852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000005852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000005852	LRPPRC	99	51.375	ENSAPOG00000016610	lrpprc	96	51.524	Acanthochromis_polyacanthus
ENSAMEG00000005852	LRPPRC	99	50.803	ENSACIG00000009604	lrpprc	96	50.803	Amphilophus_citrinellus
ENSAMEG00000005852	LRPPRC	99	51.404	ENSAOCG00000005886	lrpprc	96	51.332	Amphiprion_ocellaris
ENSAMEG00000005852	LRPPRC	99	49.240	ENSAPEG00000002937	lrpprc	95	49.385	Amphiprion_percula
ENSAMEG00000005852	LRPPRC	89	60.088	ENSATEG00000010555	lrpprc	93	60.088	Anabas_testudineus
ENSAMEG00000005852	LRPPRC	100	61.118	ENSACAG00000029278	LRPPRC	96	61.352	Anolis_carolinensis
ENSAMEG00000005852	LRPPRC	100	81.592	ENSANAG00000027440	LRPPRC	97	82.752	Aotus_nancymaae
ENSAMEG00000005852	LRPPRC	97	51.426	ENSACLG00000023712	lrpprc	97	51.426	Astatotilapia_calliptera
ENSAMEG00000005852	LRPPRC	100	80.716	ENSCJAG00000000794	LRPPRC	98	80.789	Callithrix_jacchus
ENSAMEG00000005852	LRPPRC	99	84.779	ENSCHIG00000020173	LRPPRC	99	84.762	Capra_hircus
ENSAMEG00000005852	LRPPRC	97	63.482	ENSCAPG00000013631	LRPPRC	98	62.082	Cavia_aperea
ENSAMEG00000005852	LRPPRC	100	79.570	ENSCPOG00000000204	LRPPRC	99	79.765	Cavia_porcellus
ENSAMEG00000005852	LRPPRC	100	80.747	ENSCCAG00000031900	LRPPRC	97	81.783	Cebus_capucinus
ENSAMEG00000005852	LRPPRC	100	81.519	ENSCATG00000014187	LRPPRC	97	83.527	Cercocebus_atys
ENSAMEG00000005852	LRPPRC	100	78.671	ENSCLAG00000005203	LRPPRC	98	78.671	Chinchilla_lanigera
ENSAMEG00000005852	LRPPRC	100	82.031	ENSCSAG00000013233	LRPPRC	98	82.031	Chlorocebus_sabaeus
ENSAMEG00000005852	LRPPRC	84	82.394	ENSCHOG00000003631	LRPPRC	82	82.394	Choloepus_hoffmanni
ENSAMEG00000005852	LRPPRC	100	80.334	ENSCANG00000034961	LRPPRC	97	79.372	Colobus_angolensis_palliatus
ENSAMEG00000005852	LRPPRC	99	77.185	ENSCGRG00001016261	Lrpprc	98	77.126	Cricetulus_griseus_chok1gshd
ENSAMEG00000005852	LRPPRC	99	77.185	ENSCGRG00000004072	Lrpprc	98	77.126	Cricetulus_griseus_crigri
ENSAMEG00000005852	LRPPRC	99	41.571	ENSCSEG00000003850	lrpprc	92	50.740	Cynoglossus_semilaevis
ENSAMEG00000005852	LRPPRC	99	51.453	ENSCVAG00000012967	lrpprc	96	51.453	Cyprinodon_variegatus
ENSAMEG00000005852	LRPPRC	99	49.892	ENSDARG00000043970	lrpprc	94	49.892	Danio_rerio
ENSAMEG00000005852	LRPPRC	83	62.102	ENSDNOG00000032336	-	99	62.102	Dasypus_novemcinctus
ENSAMEG00000005852	LRPPRC	100	81.406	ENSDNOG00000012594	-	98	81.406	Dasypus_novemcinctus
ENSAMEG00000005852	LRPPRC	100	80.861	ENSDORG00000012233	Lrpprc	98	81.085	Dipodomys_ordii
ENSAMEG00000005852	LRPPRC	100	80.747	ENSETEG00000006657	LRPPRC	98	80.747	Echinops_telfairi
ENSAMEG00000005852	LRPPRC	86	70.281	ENSEEUG00000012340	LRPPRC	91	70.281	Erinaceus_europaeus
ENSAMEG00000005852	LRPPRC	97	49.736	ENSELUG00000012803	lrpprc	97	49.736	Esox_lucius
ENSAMEG00000005852	LRPPRC	100	90.476	ENSFCAG00000013468	LRPPRC	98	90.476	Felis_catus
ENSAMEG00000005852	LRPPRC	99	56.407	ENSFALG00000012738	LRPPRC	99	57.314	Ficedula_albicollis
ENSAMEG00000005852	LRPPRC	100	77.392	ENSFDAG00000015328	LRPPRC	98	77.518	Fukomys_damarensis
ENSAMEG00000005852	LRPPRC	100	50.937	ENSFHEG00000019604	lrpprc	97	50.937	Fundulus_heteroclitus
ENSAMEG00000005852	LRPPRC	98	49.628	ENSGMOG00000008337	lrpprc	96	49.628	Gadus_morhua
ENSAMEG00000005852	LRPPRC	97	52.659	ENSGAFG00000001455	lrpprc	94	52.659	Gambusia_affinis
ENSAMEG00000005852	LRPPRC	98	51.029	ENSGACG00000010679	lrpprc	98	51.269	Gasterosteus_aculeatus
ENSAMEG00000005852	LRPPRC	99	52.309	ENSHBUG00000000393	lrpprc	94	52.309	Haplochromis_burtoni
ENSAMEG00000005852	LRPPRC	99	79.139	ENSHGLG00000006123	LRPPRC	98	79.139	Heterocephalus_glaber_female
ENSAMEG00000005852	LRPPRC	99	77.924	ENSHGLG00100005960	-	100	77.924	Heterocephalus_glaber_male
ENSAMEG00000005852	LRPPRC	98	49.851	ENSHCOG00000002107	lrpprc	96	49.851	Hippocampus_comes
ENSAMEG00000005852	LRPPRC	99	52.111	ENSIPUG00000009406	lrpprc	94	52.111	Ictalurus_punctatus
ENSAMEG00000005852	LRPPRC	99	83.778	ENSSTOG00000011185	LRPPRC	98	83.578	Ictidomys_tridecemlineatus
ENSAMEG00000005852	LRPPRC	100	80.622	ENSJJAG00000020475	Lrpprc	98	80.792	Jaculus_jaculus
ENSAMEG00000005852	LRPPRC	98	48.563	ENSKMAG00000003287	lrpprc	81	48.563	Kryptolebias_marmoratus
ENSAMEG00000005852	LRPPRC	97	51.087	ENSLBEG00000023225	lrpprc	95	57.434	Labrus_bergylta
ENSAMEG00000005852	LRPPRC	100	61.700	ENSLACG00000014030	LRPPRC	96	61.183	Latimeria_chalumnae
ENSAMEG00000005852	LRPPRC	99	58.533	ENSLOCG00000016390	lrpprc	93	58.533	Lepisosteus_oculatus
ENSAMEG00000005852	LRPPRC	100	77.266	ENSLAFG00000008614	LRPPRC	98	77.266	Loxodonta_africana
ENSAMEG00000005852	LRPPRC	100	81.300	ENSMFAG00000041560	LRPPRC	97	83.333	Macaca_fascicularis
ENSAMEG00000005852	LRPPRC	100	79.431	ENSMMUG00000019841	LRPPRC	99	81.671	Macaca_mulatta
ENSAMEG00000005852	LRPPRC	100	81.738	ENSMNEG00000031613	LRPPRC	97	83.915	Macaca_nemestrina
ENSAMEG00000005852	LRPPRC	99	48.611	ENSMAMG00000021835	lrpprc	97	48.731	Mastacembelus_armatus
ENSAMEG00000005852	LRPPRC	99	52.597	ENSMZEG00005027379	lrpprc	96	52.597	Maylandia_zebra
ENSAMEG00000005852	LRPPRC	100	77.751	ENSMAUG00000012118	Lrpprc	98	78.006	Mesocricetus_auratus
ENSAMEG00000005852	LRPPRC	99	84.377	ENSMICG00000010486	LRPPRC	97	87.597	Microcebus_murinus
ENSAMEG00000005852	LRPPRC	100	80.024	ENSMOCG00000006048	Lrpprc	98	79.619	Microtus_ochrogaster
ENSAMEG00000005852	LRPPRC	99	49.675	ENSMMOG00000007830	lrpprc	95	54.808	Mola_mola
ENSAMEG00000005852	LRPPRC	100	68.214	ENSMODG00000000648	LRPPRC	99	69.588	Monodelphis_domestica
ENSAMEG00000005852	LRPPRC	99	49.424	ENSMALG00000001271	lrpprc	96	49.532	Monopterus_albus
ENSAMEG00000005852	LRPPRC	100	89.685	ENSMPUG00000011800	LRPPRC	99	92.445	Mustela_putorius_furo
ENSAMEG00000005852	LRPPRC	99	85.546	ENSMLUG00000010575	LRPPRC	98	85.568	Myotis_lucifugus
ENSAMEG00000005852	LRPPRC	100	80.144	ENSNGAG00000013069	Lrpprc	98	79.619	Nannospalax_galili
ENSAMEG00000005852	LRPPRC	99	48.980	ENSNBRG00000013202	lrpprc	93	58.315	Neolamprologus_brichardi
ENSAMEG00000005852	LRPPRC	100	80.147	ENSNLEG00000016782	LRPPRC	97	82.171	Nomascus_leucogenys
ENSAMEG00000005852	LRPPRC	99	76.048	ENSOPRG00000016774	LRPPRC	91	75.410	Ochotona_princeps
ENSAMEG00000005852	LRPPRC	100	80.879	ENSODEG00000011211	LRPPRC	98	80.879	Octodon_degus
ENSAMEG00000005852	LRPPRC	99	52.632	ENSONIG00000000917	lrpprc	97	52.632	Oreochromis_niloticus
ENSAMEG00000005852	LRPPRC	62	68.571	ENSOANG00000014670	-	100	63.233	Ornithorhynchus_anatinus
ENSAMEG00000005852	LRPPRC	100	84.469	ENSOCUG00000015046	LRPPRC	94	84.469	Oryctolagus_cuniculus
ENSAMEG00000005852	LRPPRC	97	49.850	ENSORLG00000004605	lrpprc	97	47.931	Oryzias_latipes
ENSAMEG00000005852	LRPPRC	99	49.645	ENSORLG00020012536	lrpprc	99	51.435	Oryzias_latipes_hni
ENSAMEG00000005852	LRPPRC	97	49.178	ENSORLG00015018270	lrpprc	86	58.503	Oryzias_latipes_hsok
ENSAMEG00000005852	LRPPRC	100	80.659	ENSOGAG00000012798	LRPPRC	98	80.659	Otolemur_garnettii
ENSAMEG00000005852	LRPPRC	99	85.022	ENSOARG00000006522	LRPPRC	99	85.004	Ovis_aries
ENSAMEG00000005852	LRPPRC	100	77.419	ENSPPAG00000040876	LRPPRC	97	80.888	Pan_paniscus
ENSAMEG00000005852	LRPPRC	100	90.183	ENSPPRG00000006578	LRPPRC	98	90.183	Panthera_pardus
ENSAMEG00000005852	LRPPRC	98	90.562	ENSPTIG00000000933	LRPPRC	96	90.562	Panthera_tigris_altaica
ENSAMEG00000005852	LRPPRC	100	80.586	ENSPTRG00000011880	LRPPRC	97	81.977	Pan_troglodytes
ENSAMEG00000005852	LRPPRC	100	81.300	ENSPANG00000020731	LRPPRC	97	83.140	Papio_anubis
ENSAMEG00000005852	LRPPRC	91	57.623	ENSPKIG00000022232	lrpprc	95	57.623	Paramormyrops_kingsleyae
ENSAMEG00000005852	LRPPRC	99	63.560	ENSPSIG00000006830	-	97	64.573	Pelodiscus_sinensis
ENSAMEG00000005852	LRPPRC	97	49.631	ENSPMGG00000016597	lrpprc	89	49.631	Periophthalmus_magnuspinnatus
ENSAMEG00000005852	LRPPRC	95	45.000	ENSPMAG00000002147	lrpprc	99	45.000	Petromyzon_marinus
ENSAMEG00000005852	LRPPRC	100	51.379	ENSPFOG00000011227	lrpprc	97	51.379	Poecilia_formosa
ENSAMEG00000005852	LRPPRC	97	51.838	ENSPLAG00000004018	lrpprc	94	51.838	Poecilia_latipinna
ENSAMEG00000005852	LRPPRC	97	52.288	ENSPMEG00000016425	lrpprc	94	52.288	Poecilia_mexicana
ENSAMEG00000005852	LRPPRC	97	52.213	ENSPREG00000003662	lrpprc	94	52.213	Poecilia_reticulata
ENSAMEG00000005852	LRPPRC	96	78.954	ENSPPYG00000029532	-	100	78.954	Pongo_abelii
ENSAMEG00000005852	LRPPRC	84	80.423	ENSPCAG00000001430	LRPPRC	84	80.423	Procavia_capensis
ENSAMEG00000005852	LRPPRC	99	83.724	ENSPVAG00000002007	LRPPRC	98	83.724	Pteropus_vampyrus
ENSAMEG00000005852	LRPPRC	98	50.666	ENSPNYG00000000756	lrpprc	97	50.666	Pundamilia_nyererei
ENSAMEG00000005852	LRPPRC	99	53.623	ENSPNAG00000002895	lrpprc	95	53.623	Pygocentrus_nattereri
ENSAMEG00000005852	LRPPRC	100	76.675	ENSRNOG00000005877	Lrpprc	98	77.493	Rattus_norvegicus
ENSAMEG00000005852	LRPPRC	100	79.448	ENSRBIG00000031552	LRPPRC	98	79.448	Rhinopithecus_bieti
ENSAMEG00000005852	LRPPRC	100	80.966	ENSSBOG00000011807	LRPPRC	97	82.364	Saimiri_boliviensis_boliviensis
ENSAMEG00000005852	LRPPRC	99	65.352	ENSSHAG00000018725	LRPPRC	99	66.966	Sarcophilus_harrisii
ENSAMEG00000005852	LRPPRC	99	51.081	ENSSFOG00015001042	lrpprc	96	51.328	Scleropages_formosus
ENSAMEG00000005852	LRPPRC	99	51.777	ENSSDUG00000019062	lrpprc	96	51.777	Seriola_dumerili
ENSAMEG00000005852	LRPPRC	99	47.179	ENSSLDG00000023028	lrpprc	96	45.171	Seriola_lalandi_dorsalis
ENSAMEG00000005852	LRPPRC	92	69.430	ENSSARG00000000426	LRPPRC	100	71.087	Sorex_araneus
ENSAMEG00000005852	LRPPRC	99	47.826	ENSSPAG00000000162	lrpprc	96	48.111	Stegastes_partitus
ENSAMEG00000005852	LRPPRC	100	85.505	ENSSSCG00000008452	LRPPRC	98	85.505	Sus_scrofa
ENSAMEG00000005852	LRPPRC	99	54.458	ENSTGUG00000003759	LRPPRC	99	56.726	Taeniopygia_guttata
ENSAMEG00000005852	LRPPRC	91	52.590	ENSTRUG00000008409	lrpprc	93	52.590	Takifugu_rubripes
ENSAMEG00000005852	LRPPRC	99	51.092	ENSTNIG00000007470	lrpprc	99	51.750	Tetraodon_nigroviridis
ENSAMEG00000005852	LRPPRC	100	83.004	ENSTTRG00000006403	LRPPRC	98	83.004	Tursiops_truncatus
ENSAMEG00000005852	LRPPRC	99	78.443	ENSVPAG00000008993	LRPPRC	99	80.166	Vicugna_pacos
ENSAMEG00000005852	LRPPRC	99	60.333	ENSXETG00000009296	lrpprc	97	60.662	Xenopus_tropicalis
ENSAMEG00000005852	LRPPRC	100	48.084	ENSXCOG00000013343	lrpprc	88	56.982	Xiphophorus_couchianus
ENSAMEG00000005852	LRPPRC	98	51.620	ENSXMAG00000018108	lrpprc	94	51.620	Xiphophorus_maculatus