EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000005993 (Gene tree)
Gene ID: 100468717
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 197819 bases
Position: chrGL192340.1:2712635-2910453
Accession: 100468717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000006330	S1	PF00575.23	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000006590	SRBD1-201	2961	XM_011236753	ENSAMEP00000006330	987 (aa)	XP_011235055	G1LHD5

Gene Model

Click here to download ENSAMEG00000005993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000005993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000005993	SRBD1	100	90.653	ENSG00000068784	SRBD1	100	90.653	Homo_sapiens
ENSAMEG00000005993	SRBD1	100	50.927	ENSAPOG00000005103	si:ch211-117n7.8	83	57.801	Acanthochromis_polyacanthus
ENSAMEG00000005993	SRBD1	83	58.095	ENSACIG00000009875	si:ch211-117n7.8	87	57.241	Amphilophus_citrinellus
ENSAMEG00000005993	SRBD1	85	57.193	ENSAOCG00000024718	si:ch211-117n7.8	85	57.827	Amphiprion_ocellaris
ENSAMEG00000005993	SRBD1	85	57.944	ENSAPEG00000002645	si:ch211-117n7.8	88	57.944	Amphiprion_percula
ENSAMEG00000005993	SRBD1	84	58.442	ENSATEG00000010844	si:ch211-117n7.8	84	58.442	Anabas_testudineus
ENSAMEG00000005993	SRBD1	100	71.158	ENSAPLG00000006313	SRBD1	100	71.158	Anas_platyrhynchos
ENSAMEG00000005993	SRBD1	100	90.653	ENSANAG00000025573	SRBD1	100	90.653	Aotus_nancymaae
ENSAMEG00000005993	SRBD1	99	50.828	ENSACLG00000024219	si:ch211-117n7.8	94	52.626	Astatotilapia_calliptera
ENSAMEG00000005993	SRBD1	86	60.069	ENSAMXG00000004294	SRBD1	93	57.505	Astyanax_mexicanus
ENSAMEG00000005993	SRBD1	100	90.462	ENSBTAG00000007508	SRBD1	97	91.265	Bos_taurus
ENSAMEG00000005993	SRBD1	100	90.452	ENSCJAG00000000727	SRBD1	100	90.452	Callithrix_jacchus
ENSAMEG00000005993	SRBD1	100	96.061	ENSCAFG00000002554	SRBD1	100	96.061	Canis_familiaris
ENSAMEG00000005993	SRBD1	100	93.023	ENSCAFG00020026284	SRBD1	99	94.959	Canis_lupus_dingo
ENSAMEG00000005993	SRBD1	100	90.663	ENSCHIG00000016535	SRBD1	98	91.466	Capra_hircus
ENSAMEG00000005993	SRBD1	100	91.583	ENSTSYG00000012797	SRBD1	100	91.583	Carlito_syrichta
ENSAMEG00000005993	SRBD1	100	89.405	ENSCPOG00000004773	SRBD1	100	89.829	Cavia_porcellus
ENSAMEG00000005993	SRBD1	100	91.357	ENSCCAG00000025589	SRBD1	100	91.357	Cebus_capucinus
ENSAMEG00000005993	SRBD1	100	91.558	ENSCATG00000039530	SRBD1	100	91.558	Cercocebus_atys
ENSAMEG00000005993	SRBD1	100	90.754	ENSCLAG00000008623	SRBD1	100	90.754	Chinchilla_lanigera
ENSAMEG00000005993	SRBD1	100	91.859	ENSCSAG00000013350	SRBD1	100	91.859	Chlorocebus_sabaeus
ENSAMEG00000005993	SRBD1	87	94.268	ENSCHOG00000003805	SRBD1	87	94.268	Choloepus_hoffmanni
ENSAMEG00000005993	SRBD1	100	74.141	ENSCPBG00000005677	SRBD1	100	74.141	Chrysemys_picta_bellii
ENSAMEG00000005993	SRBD1	79	42.930	ENSCING00000005950	-	99	42.930	Ciona_intestinalis
ENSAMEG00000005993	SRBD1	80	43.253	ENSCSAVG00000000861	-	99	43.253	Ciona_savignyi
ENSAMEG00000005993	SRBD1	99	91.239	ENSCANG00000016307	SRBD1	99	91.239	Colobus_angolensis_palliatus
ENSAMEG00000005993	SRBD1	100	85.829	ENSCGRG00001000513	Srbd1	100	85.829	Cricetulus_griseus_chok1gshd
ENSAMEG00000005993	SRBD1	100	85.829	ENSCGRG00000002283	Srbd1	100	85.829	Cricetulus_griseus_crigri
ENSAMEG00000005993	SRBD1	100	50.689	ENSCSEG00000000856	si:ch211-117n7.8	97	51.527	Cynoglossus_semilaevis
ENSAMEG00000005993	SRBD1	84	57.733	ENSCVAG00000020212	si:ch211-117n7.8	98	54.109	Cyprinodon_variegatus
ENSAMEG00000005993	SRBD1	100	91.692	ENSDNOG00000018686	SRBD1	100	91.692	Dasypus_novemcinctus
ENSAMEG00000005993	SRBD1	100	87.626	ENSDORG00000010468	Srbd1	100	87.626	Dipodomys_ordii
ENSAMEG00000005993	SRBD1	94	34.879	FBgn0051156	CG31156	98	35.081	Drosophila_melanogaster
ENSAMEG00000005993	SRBD1	89	83.363	ENSETEG00000000739	SRBD1	91	83.363	Echinops_telfairi
ENSAMEG00000005993	SRBD1	73	47.956	ENSEBUG00000008902	si:ch211-117n7.8	96	47.956	Eptatretus_burgeri
ENSAMEG00000005993	SRBD1	100	90.462	ENSEASG00005003132	SRBD1	97	94.904	Equus_asinus_asinus
ENSAMEG00000005993	SRBD1	100	93.876	ENSECAG00000013865	SRBD1	98	93.876	Equus_caballus
ENSAMEG00000005993	SRBD1	96	54.974	ENSELUG00000012592	si:ch211-117n7.8	91	54.974	Esox_lucius
ENSAMEG00000005993	SRBD1	100	96.084	ENSFCAG00000005101	SRBD1	100	96.084	Felis_catus
ENSAMEG00000005993	SRBD1	100	69.277	ENSFALG00000012966	SRBD1	100	68.976	Ficedula_albicollis
ENSAMEG00000005993	SRBD1	98	88.580	ENSFDAG00000016670	SRBD1	98	88.866	Fukomys_damarensis
ENSAMEG00000005993	SRBD1	84	57.901	ENSFHEG00000019480	si:ch211-117n7.8	82	57.901	Fundulus_heteroclitus
ENSAMEG00000005993	SRBD1	51	52.370	ENSGMOG00000018010	-	100	52.370	Gadus_morhua
ENSAMEG00000005993	SRBD1	100	70.971	ENSGALG00000009990	SRBD1	100	70.541	Gallus_gallus
ENSAMEG00000005993	SRBD1	98	51.341	ENSGAFG00000019664	si:ch211-117n7.8	93	53.180	Gambusia_affinis
ENSAMEG00000005993	SRBD1	63	61.120	ENSGACG00000010794	si:ch211-117n7.8	100	61.280	Gasterosteus_aculeatus
ENSAMEG00000005993	SRBD1	84	81.273	ENSGAGG00000006166	SRBD1	99	81.273	Gopherus_agassizii
ENSAMEG00000005993	SRBD1	97	90.806	ENSGGOG00000005910	SRBD1	99	90.739	Gorilla_gorilla
ENSAMEG00000005993	SRBD1	85	50.415	ENSHBUG00000013207	si:ch211-117n7.8	96	47.213	Haplochromis_burtoni
ENSAMEG00000005993	SRBD1	99	89.819	ENSHGLG00000018153	-	99	89.819	Heterocephalus_glaber_female
ENSAMEG00000005993	SRBD1	99	89.617	ENSHGLG00100015183	-	99	89.617	Heterocephalus_glaber_male
ENSAMEG00000005993	SRBD1	85	61.602	ENSIPUG00000009661	srbd1	93	57.516	Ictalurus_punctatus
ENSAMEG00000005993	SRBD1	100	91.046	ENSSTOG00000005898	SRBD1	100	91.046	Ictidomys_tridecemlineatus
ENSAMEG00000005993	SRBD1	100	81.124	ENSJJAG00000022244	Srbd1	100	81.124	Jaculus_jaculus
ENSAMEG00000005993	SRBD1	99	51.270	ENSKMAG00000003473	si:ch211-117n7.8	83	57.025	Kryptolebias_marmoratus
ENSAMEG00000005993	SRBD1	99	50.865	ENSLBEG00000027518	si:ch211-117n7.8	92	53.542	Labrus_bergylta
ENSAMEG00000005993	SRBD1	85	71.124	ENSLACG00000009790	SRBD1	100	71.124	Latimeria_chalumnae
ENSAMEG00000005993	SRBD1	100	57.537	ENSLOCG00000016360	si:ch211-117n7.8	99	57.537	Lepisosteus_oculatus
ENSAMEG00000005993	SRBD1	100	91.859	ENSMFAG00000042026	SRBD1	100	91.859	Macaca_fascicularis
ENSAMEG00000005993	SRBD1	100	91.558	ENSMMUG00000003490	SRBD1	100	91.558	Macaca_mulatta
ENSAMEG00000005993	SRBD1	100	89.146	ENSMNEG00000034701	SRBD1	100	89.146	Macaca_nemestrina
ENSAMEG00000005993	SRBD1	100	91.457	ENSMLEG00000000745	SRBD1	100	91.457	Mandrillus_leucophaeus
ENSAMEG00000005993	SRBD1	82	56.799	ENSMAMG00000021921	si:ch211-117n7.8	85	55.747	Mastacembelus_armatus
ENSAMEG00000005993	SRBD1	99	50.828	ENSMZEG00005027369	si:ch211-117n7.8	94	52.626	Maylandia_zebra
ENSAMEG00000005993	SRBD1	80	75.628	ENSMGAG00000010273	SRBD1	99	75.628	Meleagris_gallopavo
ENSAMEG00000005993	SRBD1	79	87.438	ENSMAUG00000013916	Srbd1	99	85.053	Mesocricetus_auratus
ENSAMEG00000005993	SRBD1	100	92.864	ENSMICG00000007835	SRBD1	100	92.864	Microcebus_murinus
ENSAMEG00000005993	SRBD1	100	84.004	ENSMOCG00000018716	Srbd1	100	84.004	Microtus_ochrogaster
ENSAMEG00000005993	SRBD1	88	54.849	ENSMMOG00000007507	si:ch211-117n7.8	92	54.849	Mola_mola
ENSAMEG00000005993	SRBD1	99	50.291	ENSMALG00000001562	si:ch211-117n7.8	97	51.497	Monopterus_albus
ENSAMEG00000005993	SRBD1	100	82.294	MGP_CAROLIEiJ_G0021934	Srbd1	100	82.294	Mus_caroli
ENSAMEG00000005993	SRBD1	100	82.294	ENSMUSG00000024135	Srbd1	100	82.294	Mus_musculus
ENSAMEG00000005993	SRBD1	100	81.187	MGP_PahariEiJ_G0020924	Srbd1	100	81.187	Mus_pahari
ENSAMEG00000005993	SRBD1	100	82.596	MGP_SPRETEiJ_G0022850	Srbd1	100	82.596	Mus_spretus
ENSAMEG00000005993	SRBD1	100	88.956	ENSMLUG00000007039	SRBD1	100	88.956	Myotis_lucifugus
ENSAMEG00000005993	SRBD1	100	84.344	ENSNGAG00000011893	Srbd1	100	83.953	Nannospalax_galili
ENSAMEG00000005993	SRBD1	84	56.057	ENSNBRG00000012873	si:ch211-117n7.8	85	56.176	Neolamprologus_brichardi
ENSAMEG00000005993	SRBD1	100	90.754	ENSNLEG00000016877	SRBD1	100	90.754	Nomascus_leucogenys
ENSAMEG00000005993	SRBD1	100	87.084	ENSODEG00000012095	SRBD1	100	87.084	Octodon_degus
ENSAMEG00000005993	SRBD1	99	50.828	ENSONIG00000000945	si:ch211-117n7.8	99	58.173	Oreochromis_niloticus
ENSAMEG00000005993	SRBD1	100	92.161	ENSOCUG00000015385	SRBD1	100	92.864	Oryctolagus_cuniculus
ENSAMEG00000005993	SRBD1	98	49.556	ENSORLG00000004427	si:ch211-117n7.8	85	53.628	Oryzias_latipes
ENSAMEG00000005993	SRBD1	99	51.163	ENSORLG00020012792	si:ch211-117n7.8	96	52.152	Oryzias_latipes_hni
ENSAMEG00000005993	SRBD1	99	51.068	ENSORLG00015018598	si:ch211-117n7.8	85	56.300	Oryzias_latipes_hsok
ENSAMEG00000005993	SRBD1	95	52.296	ENSOMEG00000012229	si:ch211-117n7.8	92	52.714	Oryzias_melastigma
ENSAMEG00000005993	SRBD1	100	85.341	ENSOGAG00000001076	SRBD1	100	85.542	Otolemur_garnettii
ENSAMEG00000005993	SRBD1	100	86.324	ENSOARG00000005958	SRBD1	100	87.100	Ovis_aries
ENSAMEG00000005993	SRBD1	100	90.754	ENSPPAG00000038442	SRBD1	100	90.754	Pan_paniscus
ENSAMEG00000005993	SRBD1	100	96.181	ENSPPRG00000003449	SRBD1	100	96.181	Panthera_pardus
ENSAMEG00000005993	SRBD1	100	96.181	ENSPTIG00000012495	SRBD1	100	96.181	Panthera_tigris_altaica
ENSAMEG00000005993	SRBD1	100	90.754	ENSPTRG00000011889	SRBD1	100	90.754	Pan_troglodytes
ENSAMEG00000005993	SRBD1	100	91.457	ENSPANG00000008063	SRBD1	100	91.457	Papio_anubis
ENSAMEG00000005993	SRBD1	87	58.966	ENSPKIG00000021973	si:ch211-117n7.8	89	58.966	Paramormyrops_kingsleyae
ENSAMEG00000005993	SRBD1	100	73.239	ENSPSIG00000008992	SRBD1	100	73.944	Pelodiscus_sinensis
ENSAMEG00000005993	SRBD1	84	55.778	ENSPMGG00000013348	si:ch211-117n7.8	98	51.279	Periophthalmus_magnuspinnatus
ENSAMEG00000005993	SRBD1	100	83.121	ENSPEMG00000020684	Srbd1	100	83.121	Peromyscus_maniculatus_bairdii
ENSAMEG00000005993	SRBD1	98	52.569	ENSPFOG00000010650	si:ch211-117n7.8	93	53.838	Poecilia_formosa
ENSAMEG00000005993	SRBD1	98	52.024	ENSPLAG00000002141	si:ch211-117n7.8	93	53.264	Poecilia_latipinna
ENSAMEG00000005993	SRBD1	98	52.668	ENSPMEG00000018537	si:ch211-117n7.8	93	53.942	Poecilia_mexicana
ENSAMEG00000005993	SRBD1	97	51.800	ENSPREG00000003258	si:ch211-117n7.8	94	53.112	Poecilia_reticulata
ENSAMEG00000005993	SRBD1	100	83.507	ENSPPYG00000012444	SRBD1	99	83.507	Pongo_abelii
ENSAMEG00000005993	SRBD1	82	83.134	ENSPCAG00000005629	SRBD1	85	83.134	Procavia_capensis
ENSAMEG00000005993	SRBD1	100	79.960	ENSPCOG00000017669	SRBD1	100	79.960	Propithecus_coquereli
ENSAMEG00000005993	SRBD1	100	82.814	ENSPVAG00000001782	SRBD1	100	82.814	Pteropus_vampyrus
ENSAMEG00000005993	SRBD1	85	53.955	ENSPNYG00000000508	si:ch211-117n7.8	96	50.366	Pundamilia_nyererei
ENSAMEG00000005993	SRBD1	96	57.736	ENSPNAG00000013492	SRBD1	95	57.736	Pygocentrus_nattereri
ENSAMEG00000005993	SRBD1	100	81.206	ENSRNOG00000014720	Srbd1	99	81.910	Rattus_norvegicus
ENSAMEG00000005993	SRBD1	99	91.138	ENSRBIG00000033486	SRBD1	99	91.138	Rhinopithecus_bieti
ENSAMEG00000005993	SRBD1	99	91.138	ENSRROG00000041599	SRBD1	99	91.138	Rhinopithecus_roxellana
ENSAMEG00000005993	SRBD1	100	90.553	ENSSBOG00000024982	SRBD1	100	90.553	Saimiri_boliviensis_boliviensis
ENSAMEG00000005993	SRBD1	84	59.953	ENSSFOG00015001128	si:ch211-117n7.8	90	59.953	Scleropages_formosus
ENSAMEG00000005993	SRBD1	99	50.628	ENSSMAG00000018256	si:ch211-117n7.8	82	57.882	Scophthalmus_maximus
ENSAMEG00000005993	SRBD1	87	56.571	ENSSLDG00000023189	si:ch211-117n7.8	85	56.571	Seriola_lalandi_dorsalis
ENSAMEG00000005993	SRBD1	100	79.598	ENSSARG00000009740	SRBD1	100	79.598	Sorex_araneus
ENSAMEG00000005993	SRBD1	87	78.074	ENSSPUG00000010475	SRBD1	100	72.574	Sphenodon_punctatus
ENSAMEG00000005993	SRBD1	86	54.493	ENSSPAG00000008092	-	97	50.918	Stegastes_partitus
ENSAMEG00000005993	SRBD1	100	92.871	ENSSSCG00000008445	SRBD1	98	93.273	Sus_scrofa
ENSAMEG00000005993	SRBD1	84	77.831	ENSTGUG00000003878	SRBD1	100	77.831	Taeniopygia_guttata
ENSAMEG00000005993	SRBD1	99	50.870	ENSTRUG00000007080	si:ch211-117n7.8	93	57.244	Takifugu_rubripes
ENSAMEG00000005993	SRBD1	99	50.684	ENSTNIG00000007464	si:ch211-117n7.8	97	51.308	Tetraodon_nigroviridis
ENSAMEG00000005993	SRBD1	82	98.936	ENSTBEG00000004556	SRBD1	82	98.936	Tupaia_belangeri
ENSAMEG00000005993	SRBD1	94	93.548	ENSTTRG00000011871	SRBD1	94	93.548	Tursiops_truncatus
ENSAMEG00000005993	SRBD1	100	97.978	ENSUAMG00000008126	SRBD1	100	96.226	Ursus_americanus
ENSAMEG00000005993	SRBD1	100	98.180	ENSUMAG00000012902	SRBD1	98	98.180	Ursus_maritimus
ENSAMEG00000005993	SRBD1	91	93.164	ENSVPAG00000006825	SRBD1	100	93.164	Vicugna_pacos
ENSAMEG00000005993	SRBD1	100	96.158	ENSVVUG00000005389	SRBD1	100	96.158	Vulpes_vulpes
ENSAMEG00000005993	SRBD1	100	52.754	ENSXETG00000002760	srbd1	100	53.043	Xenopus_tropicalis
ENSAMEG00000005993	SRBD1	96	52.746	ENSXMAG00000016861	si:ch211-117n7.8	93	52.746	Xiphophorus_maculatus