EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000006224 (Gene tree)
Gene ID: 100464352
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 34137 bases
Position: chrGL193117.1:242798-276934
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000006571	PPR	PF01535.20	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000006849	-	2271	-	ENSAMEP00000006571	756 (aa)	-	G1LI23

Gene Model

Click here to download ENSAMEG00000006224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000006224's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000006224	-	93	76.901	ENSG00000106246	PTCD1	100	77.042	Homo_sapiens
ENSAMEG00000006224	-	99	76.913	ENSG00000248919	ATP5MF-PTCD1	99	77.045	Homo_sapiens
ENSAMEG00000006224	-	74	48.142	ENSAPOG00000010679	ptcd1	85	48.142	Acanthochromis_polyacanthus
ENSAMEG00000006224	-	83	49.762	ENSACIG00000017861	ptcd1	90	49.762	Amphilophus_citrinellus
ENSAMEG00000006224	-	83	46.334	ENSAOCG00000022617	ptcd1	92	46.334	Amphiprion_ocellaris
ENSAMEG00000006224	-	87	47.085	ENSAOCG00000020741	-	91	47.085	Amphiprion_ocellaris
ENSAMEG00000006224	-	87	46.936	ENSAPEG00000022632	ptcd1	91	46.936	Amphiprion_percula
ENSAMEG00000006224	-	78	51.443	ENSATEG00000007016	ptcd1	81	51.952	Anabas_testudineus
ENSAMEG00000006224	-	81	60.749	ENSAPLG00000006862	-	96	60.323	Anas_platyrhynchos
ENSAMEG00000006224	-	97	56.225	ENSACAG00000012871	-	97	56.225	Anolis_carolinensis
ENSAMEG00000006224	-	91	77.056	ENSANAG00000035790	-	99	77.201	Aotus_nancymaae
ENSAMEG00000006224	-	80	49.918	ENSACLG00000002824	ptcd1	83	49.918	Astatotilapia_calliptera
ENSAMEG00000006224	-	80	50.079	ENSAMXG00000037292	ptcd1	88	49.843	Astyanax_mexicanus
ENSAMEG00000006224	-	93	81.471	ENSBTAG00000020440	-	87	81.471	Bos_taurus
ENSAMEG00000006224	-	93	76.793	ENSCJAG00000015815	-	100	76.934	Callithrix_jacchus
ENSAMEG00000006224	-	100	88.228	ENSCAFG00000015055	-	100	88.228	Canis_familiaris
ENSAMEG00000006224	-	94	88.826	ENSCAFG00020014480	-	94	88.826	Canis_lupus_dingo
ENSAMEG00000006224	-	93	81.161	ENSCHIG00000027000	-	99	81.161	Capra_hircus
ENSAMEG00000006224	-	93	81.303	ENSTSYG00000029495	-	100	81.303	Carlito_syrichta
ENSAMEG00000006224	-	87	78.723	ENSCAPG00000014660	-	100	78.723	Cavia_aperea
ENSAMEG00000006224	-	93	78.187	ENSCPOG00000001780	-	100	78.187	Cavia_porcellus
ENSAMEG00000006224	-	93	74.719	ENSCCAG00000034025	-	100	75.843	Cebus_capucinus
ENSAMEG00000006224	-	93	77.010	ENSCATG00000040859	-	99	77.292	Cercocebus_atys
ENSAMEG00000006224	-	91	79.365	ENSCLAG00000006354	-	100	79.208	Chinchilla_lanigera
ENSAMEG00000006224	-	85	76.651	ENSCSAG00000017794	-	95	76.959	Chlorocebus_sabaeus
ENSAMEG00000006224	-	90	57.182	ENSCPBG00000020866	-	97	57.044	Chrysemys_picta_bellii
ENSAMEG00000006224	-	77	31.208	ENSCING00000007717	-	97	31.376	Ciona_intestinalis
ENSAMEG00000006224	-	93	76.238	ENSCANG00000023441	-	99	76.521	Colobus_angolensis_palliatus
ENSAMEG00000006224	-	93	75.955	ENSCGRG00001023686	Ptcd1	100	75.955	Cricetulus_griseus_chok1gshd
ENSAMEG00000006224	-	93	75.813	ENSCGRG00000015031	Ptcd1	99	75.813	Cricetulus_griseus_crigri
ENSAMEG00000006224	-	79	46.865	ENSCSEG00000002378	ptcd1	82	46.865	Cynoglossus_semilaevis
ENSAMEG00000006224	-	78	48.576	ENSCVAG00000015826	ptcd1	81	48.576	Cyprinodon_variegatus
ENSAMEG00000006224	-	79	48.033	ENSCVAG00000003621	ptcd1	89	47.455	Cyprinodon_variegatus
ENSAMEG00000006224	-	83	50.079	ENSDARG00000076176	ptcd1	90	50.079	Danio_rerio
ENSAMEG00000006224	-	93	78.561	ENSDNOG00000009957	-	100	80.000	Dasypus_novemcinctus
ENSAMEG00000006224	-	91	76.301	ENSDORG00000000740	Ptcd1	99	76.734	Dipodomys_ordii
ENSAMEG00000006224	-	86	40.529	ENSEBUG00000014515	ptcd1	99	41.472	Eptatretus_burgeri
ENSAMEG00000006224	-	93	84.507	ENSEASG00005002480	-	100	85.493	Equus_asinus_asinus
ENSAMEG00000006224	-	93	84.789	ENSECAG00000016617	-	100	85.775	Equus_caballus
ENSAMEG00000006224	-	78	48.470	ENSELUG00000016517	ptcd1	82	48.470	Esox_lucius
ENSAMEG00000006224	-	93	89.220	ENSFCAG00000015069	-	100	89.220	Felis_catus
ENSAMEG00000006224	-	88	56.815	ENSFALG00000013803	-	93	57.391	Ficedula_albicollis
ENSAMEG00000006224	-	93	77.730	ENSFDAG00000006393	-	100	77.730	Fukomys_damarensis
ENSAMEG00000006224	-	70	48.881	ENSFHEG00000012491	ptcd1	88	48.881	Fundulus_heteroclitus
ENSAMEG00000006224	-	76	48.270	ENSGMOG00000007639	ptcd1	91	48.270	Gadus_morhua
ENSAMEG00000006224	-	81	58.190	ENSGALG00000004711	-	90	57.710	Gallus_gallus
ENSAMEG00000006224	-	78	49.833	ENSGAFG00000013175	ptcd1	83	49.833	Gambusia_affinis
ENSAMEG00000006224	-	82	48.276	ENSGACG00000016607	ptcd1	93	48.889	Gasterosteus_aculeatus
ENSAMEG00000006224	-	76	61.604	ENSGAGG00000021832	-	87	61.604	Gopherus_agassizii
ENSAMEG00000006224	-	93	76.728	ENSGGOG00000015123	-	99	76.869	Gorilla_gorilla
ENSAMEG00000006224	-	77	50.847	ENSHBUG00000018275	ptcd1	80	50.847	Haplochromis_burtoni
ENSAMEG00000006224	-	93	78.470	ENSHGLG00000017621	-	100	78.470	Heterocephalus_glaber_female
ENSAMEG00000006224	-	93	78.470	ENSHGLG00100007218	-	100	78.470	Heterocephalus_glaber_male
ENSAMEG00000006224	-	78	47.404	ENSHCOG00000010784	ptcd1	82	48.299	Hippocampus_comes
ENSAMEG00000006224	-	93	78.702	ENSSTOG00000001682	-	100	78.702	Ictidomys_tridecemlineatus
ENSAMEG00000006224	-	93	75.461	ENSJJAG00000000319	Ptcd1	100	75.461	Jaculus_jaculus
ENSAMEG00000006224	-	78	48.993	ENSKMAG00000008708	ptcd1	82	49.161	Kryptolebias_marmoratus
ENSAMEG00000006224	-	86	45.688	ENSLBEG00000008061	ptcd1	88	45.758	Labrus_bergylta
ENSAMEG00000006224	-	82	57.052	ENSLACG00000011172	ptcd1	87	57.052	Latimeria_chalumnae
ENSAMEG00000006224	-	88	51.778	ENSLOCG00000004833	ptcd1	97	53.503	Lepisosteus_oculatus
ENSAMEG00000006224	-	93	73.803	ENSLAFG00000002588	-	100	73.803	Loxodonta_africana
ENSAMEG00000006224	-	93	76.728	ENSMFAG00000041324	-	99	77.010	Macaca_fascicularis
ENSAMEG00000006224	-	99	76.618	ENSMMUG00000030408	-	99	76.882	Macaca_mulatta
ENSAMEG00000006224	-	93	76.728	ENSMNEG00000043786	-	99	77.010	Macaca_nemestrina
ENSAMEG00000006224	-	93	59.187	ENSMLEG00000031179	-	99	61.150	Mandrillus_leucophaeus
ENSAMEG00000006224	-	79	50.828	ENSMAMG00000007623	ptcd1	82	50.828	Mastacembelus_armatus
ENSAMEG00000006224	-	80	49.918	ENSMZEG00005012722	ptcd1	83	49.918	Maylandia_zebra
ENSAMEG00000006224	-	98	54.356	ENSMGAG00000004211	-	99	54.616	Meleagris_gallopavo
ENSAMEG00000006224	-	93	79.037	ENSMICG00000017428	-	100	79.745	Microcebus_murinus
ENSAMEG00000006224	-	85	45.646	ENSMMOG00000020243	ptcd1	91	47.635	Mola_mola
ENSAMEG00000006224	-	92	59.864	ENSMODG00000001350	-	99	59.864	Monodelphis_domestica
ENSAMEG00000006224	-	79	50.822	ENSMALG00000018442	ptcd1	82	50.822	Monopterus_albus
ENSAMEG00000006224	-	93	77.383	MGP_CAROLIEiJ_G0028011	Ptcd1	99	77.525	Mus_caroli
ENSAMEG00000006224	-	93	77.383	ENSMUSG00000029624	Ptcd1	99	77.525	Mus_musculus
ENSAMEG00000006224	-	93	77.447	MGP_PahariEiJ_G0024580	Ptcd1	100	77.589	Mus_pahari
ENSAMEG00000006224	-	93	77.383	MGP_SPRETEiJ_G0029012	Ptcd1	99	77.667	Mus_spretus
ENSAMEG00000006224	-	93	90.199	ENSMPUG00000016518	-	100	90.199	Mustela_putorius_furo
ENSAMEG00000006224	-	99	85.337	ENSMLUG00000010994	-	100	85.337	Myotis_lucifugus
ENSAMEG00000006224	-	80	50.897	ENSNBRG00000010079	ptcd1	86	50.897	Neolamprologus_brichardi
ENSAMEG00000006224	-	93	79.964	ENSNLEG00000011060	-	99	79.964	Nomascus_leucogenys
ENSAMEG00000006224	-	90	60.976	ENSMEUG00000006930	-	98	60.976	Notamacropus_eugenii
ENSAMEG00000006224	-	83	78.353	ENSOPRG00000013647	-	89	78.353	Ochotona_princeps
ENSAMEG00000006224	-	77	50.592	ENSONIG00000003168	ptcd1	95	50.592	Oreochromis_niloticus
ENSAMEG00000006224	-	76	57.639	ENSOANG00000007728	-	75	57.639	Ornithorhynchus_anatinus
ENSAMEG00000006224	-	93	78.014	ENSOCUG00000010584	-	97	78.014	Oryctolagus_cuniculus
ENSAMEG00000006224	-	79	48.760	ENSORLG00000009275	ptcd1	85	48.760	Oryzias_latipes
ENSAMEG00000006224	-	79	48.510	ENSORLG00020000988	ptcd1	85	48.510	Oryzias_latipes_hni
ENSAMEG00000006224	-	79	48.179	ENSORLG00015010557	ptcd1	85	48.179	Oryzias_latipes_hsok
ENSAMEG00000006224	-	79	49.088	ENSOMEG00000020627	ptcd1	87	49.088	Oryzias_melastigma
ENSAMEG00000006224	-	92	75.000	ENSOGAG00000010877	-	100	75.857	Otolemur_garnettii
ENSAMEG00000006224	-	93	76.379	ENSOARG00000018676	-	100	76.379	Ovis_aries
ENSAMEG00000006224	-	93	76.934	ENSPPAG00000036024	-	100	76.934	Pan_paniscus
ENSAMEG00000006224	-	93	88.936	ENSPPRG00000003478	-	100	88.936	Panthera_pardus
ENSAMEG00000006224	-	93	76.934	ENSPTRG00000019452	-	100	76.934	Pan_troglodytes
ENSAMEG00000006224	-	93	77.151	ENSPANG00000016730	-	99	77.433	Papio_anubis
ENSAMEG00000006224	-	82	52.532	ENSPKIG00000014215	ptcd1	91	52.690	Paramormyrops_kingsleyae
ENSAMEG00000006224	-	79	59.901	ENSPSIG00000011184	-	100	60.199	Pelodiscus_sinensis
ENSAMEG00000006224	-	68	42.337	ENSPMAG00000009667	ptcd1	100	42.337	Petromyzon_marinus
ENSAMEG00000006224	-	88	62.974	ENSPCIG00000024778	-	92	62.974	Phascolarctos_cinereus
ENSAMEG00000006224	-	78	48.833	ENSPFOG00000004458	ptcd1	82	49.000	Poecilia_formosa
ENSAMEG00000006224	-	78	49.158	ENSPLAG00000011051	ptcd1	82	49.327	Poecilia_latipinna
ENSAMEG00000006224	-	78	48.833	ENSPMEG00000020547	ptcd1	82	48.833	Poecilia_mexicana
ENSAMEG00000006224	-	77	49.233	ENSPREG00000000059	ptcd1	83	48.986	Poecilia_reticulata
ENSAMEG00000006224	-	87	78.626	ENSPPYG00000017377	-	99	78.626	Pongo_abelii
ENSAMEG00000006224	-	75	81.690	ENSPCAG00000001852	-	89	81.690	Procavia_capensis
ENSAMEG00000006224	-	93	79.320	ENSPCOG00000018596	-	100	80.028	Propithecus_coquereli
ENSAMEG00000006224	-	62	90.000	ENSPVAG00000007529	-	72	90.000	Pteropus_vampyrus
ENSAMEG00000006224	-	77	51.771	ENSPNYG00000019993	ptcd1	80	51.771	Pundamilia_nyererei
ENSAMEG00000006224	-	83	51.969	ENSPNAG00000014931	ptcd1	92	50.912	Pygocentrus_nattereri
ENSAMEG00000006224	-	91	77.424	ENSRNOG00000000987	Ptcd1	98	77.391	Rattus_norvegicus
ENSAMEG00000006224	-	93	76.521	ENSRBIG00000043393	-	99	76.803	Rhinopithecus_bieti
ENSAMEG00000006224	-	93	76.379	ENSRROG00000036420	-	99	76.662	Rhinopithecus_roxellana
ENSAMEG00000006224	-	93	77.042	ENSSBOG00000024114	-	100	77.183	Saimiri_boliviensis_boliviensis
ENSAMEG00000006224	-	91	57.400	ENSSHAG00000011376	-	97	62.133	Sarcophilus_harrisii
ENSAMEG00000006224	-	81	53.532	ENSSFOG00015007909	ptcd1	84	53.532	Scleropages_formosus
ENSAMEG00000006224	-	82	46.474	ENSSMAG00000000218	ptcd1	96	45.182	Scophthalmus_maximus
ENSAMEG00000006224	-	78	50.839	ENSSDUG00000015671	ptcd1	84	50.839	Seriola_dumerili
ENSAMEG00000006224	-	79	49.595	ENSSLDG00000014261	ptcd1	86	49.595	Seriola_lalandi_dorsalis
ENSAMEG00000006224	-	79	59.420	ENSSPUG00000003540	-	83	59.420	Sphenodon_punctatus
ENSAMEG00000006224	-	82	50.238	ENSSPAG00000011049	ptcd1	87	49.387	Stegastes_partitus
ENSAMEG00000006224	-	86	83.871	ENSSSCG00000007622	-	99	83.891	Sus_scrofa
ENSAMEG00000006224	-	81	61.003	ENSTGUG00000007563	-	99	61.327	Taeniopygia_guttata
ENSAMEG00000006224	-	84	47.327	ENSTRUG00000013471	ptcd1	84	47.327	Takifugu_rubripes
ENSAMEG00000006224	-	78	48.814	ENSTNIG00000008271	ptcd1	83	48.814	Tetraodon_nigroviridis
ENSAMEG00000006224	-	93	78.138	ENSTBEG00000011021	-	100	78.138	Tupaia_belangeri
ENSAMEG00000006224	-	93	80.453	ENSTTRG00000003006	-	100	80.453	Tursiops_truncatus
ENSAMEG00000006224	-	93	97.443	ENSUAMG00000008049	-	100	97.443	Ursus_americanus
ENSAMEG00000006224	-	93	88.571	ENSVVUG00000008836	-	99	88.571	Vulpes_vulpes
ENSAMEG00000006224	-	86	51.829	ENSXETG00000009891	ptcd1	93	51.347	Xenopus_tropicalis
ENSAMEG00000006224	-	78	49.831	ENSXMAG00000015540	ptcd1	86	48.784	Xiphophorus_maculatus