EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMEG00000006406 (Gene tree)
Gene ID
100482360
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Ailuropoda_melanoleuca
Status
putative
Strand
Plus strand
Length
7903 bases
Position
chrGL192891.1:930362-938264
Accession
17042
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMEP00000006761RRM_1PF00076.221.6e-4312
ENSAMEP00000006761RRM_1PF00076.221.6e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMET00000007045PUF60-2011662-ENSAMEP00000006761553 (aa)-G1LIK8
Gene Model
Click here to download ENSAMEG00000006406's gene model file
Pathways
Pathway IDPathway NameSource
aml03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000006406's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMEG00000006406PUF609996.953ENSG00000179950PUF6010097.481Homo_sapiens
ENSAMEG00000006406PUF609483.333ENSAPOG00000001713puf60b9983.523Acanthochromis_polyacanthus
ENSAMEG00000006406PUF609283.109ENSACIG00000021705puf60b10083.301Amphilophus_citrinellus
ENSAMEG00000006406PUF609275.432ENSACIG00000003263-9975.862Amphilophus_citrinellus
ENSAMEG00000006406PUF609383.302ENSAOCG00000005395puf60b10084.261Amphiprion_ocellaris
ENSAMEG00000006406PUF609678.004ENSAOCG00000015558-9979.848Amphiprion_ocellaris
ENSAMEG00000006406PUF609477.841ENSAPEG00000011923puf60b9978.030Amphiprion_percula
ENSAMEG00000006406PUF609270.633ENSAPEG00000001836-9972.106Amphiprion_percula
ENSAMEG00000006406PUF609379.198ENSATEG00000006303-9979.810Anabas_testudineus
ENSAMEG00000006406PUF609483.144ENSATEG00000001730puf60b9983.333Anabas_testudineus
ENSAMEG00000006406PUF609396.360ENSAPLG00000010150PUF6010096.360Anas_platyrhynchos
ENSAMEG00000006406PUF609394.275ENSACAG00000001645PUF609794.118Anolis_carolinensis
ENSAMEG00000006406PUF609996.263ENSANAG00000018626PUF6010097.481Aotus_nancymaae
ENSAMEG00000006406PUF609283.109ENSACLG00000004462puf60b10083.301Astatotilapia_calliptera
ENSAMEG00000006406PUF609275.094ENSAMXG00000041030puf60b10075.568Astyanax_mexicanus
ENSAMEG00000006406PUF609382.056ENSAMXG00000036570puf60a10079.273Astyanax_mexicanus
ENSAMEG00000006406PUF609996.435ENSBTAG00000037493PUF609997.510Bos_taurus
ENSAMEG00000006406PUF607250.178WBGene00004389rnp-68349.505Caenorhabditis_elegans
ENSAMEG00000006406PUF609996.270ENSCJAG00000021485PUF609897.701Callithrix_jacchus
ENSAMEG00000006406PUF609997.283ENSCAFG00000001400PUF609997.283Canis_familiaris
ENSAMEG00000006406PUF609997.138ENSCAFG00020018754PUF609997.138Canis_lupus_dingo
ENSAMEG00000006406PUF609997.636ENSCHIG00000001618PUF609297.636Capra_hircus
ENSAMEG00000006406PUF609996.270ENSTSYG00000011912PUF6010097.868Carlito_syrichta
ENSAMEG00000006406PUF609991.055ENSCPOG00000014613PUF609991.234Cavia_porcellus
ENSAMEG00000006406PUF609997.273ENSCCAG00000007744PUF609997.273Cebus_capucinus
ENSAMEG00000006406PUF609996.953ENSCATG00000035405PUF609996.953Cercocebus_atys
ENSAMEG00000006406PUF609996.270ENSCLAG00000009154PUF609996.270Chinchilla_lanigera
ENSAMEG00000006406PUF609297.481ENSCSAG00000008878PUF6010097.481Chlorocebus_sabaeus
ENSAMEG00000006406PUF609396.360ENSCPBG00000005595PUF609896.360Chrysemys_picta_bellii
ENSAMEG00000006406PUF609348.593ENSCING00000008436-9849.427Ciona_intestinalis
ENSAMEG00000006406PUF605955.132ENSCING00000002156-8756.973Ciona_intestinalis
ENSAMEG00000006406PUF609053.640ENSCSAVG00000001385-9953.372Ciona_savignyi
ENSAMEG00000006406PUF609050.200ENSCSAVG00000004765-9749.799Ciona_savignyi
ENSAMEG00000006406PUF608193.142ENSCANG00000041843PUF6010096.882Colobus_angolensis_palliatus
ENSAMEG00000006406PUF609995.560ENSCGRG00001017442Puf609995.560Cricetulus_griseus_chok1gshd
ENSAMEG00000006406PUF609995.504ENSCGRG00000003717Puf609995.504Cricetulus_griseus_crigri
ENSAMEG00000006406PUF609382.543ENSCSEG00000019887puf60b9382.543Cynoglossus_semilaevis
ENSAMEG00000006406PUF609271.373ENSCSEG00000014845-8972.989Cynoglossus_semilaevis
ENSAMEG00000006406PUF609282.342ENSCVAG00000009386puf60b10083.685Cyprinodon_variegatus
ENSAMEG00000006406PUF608477.590ENSCVAG00000001560-9877.590Cyprinodon_variegatus
ENSAMEG00000006406PUF609276.850ENSDARG00000001241puf60b9996.032Danio_rerio
ENSAMEG00000006406PUF609284.659ENSDARG00000032175puf60a9994.043Danio_rerio
ENSAMEG00000006406PUF609779.817ENSDNOG00000043278PUF609879.603Dasypus_novemcinctus
ENSAMEG00000006406PUF609997.459ENSDORG00000004585Puf6010097.459Dipodomys_ordii
ENSAMEG00000006406PUF609048.021FBgn0028577hfp9944.563Drosophila_melanogaster
ENSAMEG00000006406PUF609068.876ENSEBUG00000005470-8868.474Eptatretus_burgeri
ENSAMEG00000006406PUF609460.336ENSEBUG00000014291puf60b8561.993Eptatretus_burgeri
ENSAMEG00000006406PUF609997.645ENSEASG00005009695PUF609997.645Equus_asinus_asinus
ENSAMEG00000006406PUF609997.468ENSECAG00000024681PUF609997.468Equus_caballus
ENSAMEG00000006406PUF609681.468ENSELUG00000018443-9883.144Esox_lucius
ENSAMEG00000006406PUF609481.214ENSELUG00000006507puf60b9978.388Esox_lucius
ENSAMEG00000006406PUF609996.092ENSFCAG00000001045PUF6010097.481Felis_catus
ENSAMEG00000006406PUF609383.716ENSFALG00000001136PUF609884.866Ficedula_albicollis
ENSAMEG00000006406PUF609995.915ENSFDAG00000017177PUF609995.915Fukomys_damarensis
ENSAMEG00000006406PUF609381.973ENSFHEG00000020046puf60b10084.069Fundulus_heteroclitus
ENSAMEG00000006406PUF608877.264ENSFHEG00000021687PUF6010078.074Fundulus_heteroclitus
ENSAMEG00000006406PUF609369.549ENSGMOG00000006392puf60b10068.985Gadus_morhua
ENSAMEG00000006406PUF606195.349ENSGALG00000039901PUF609495.349Gallus_gallus
ENSAMEG00000006406PUF609277.563ENSGAFG00000004334-9976.789Gambusia_affinis
ENSAMEG00000006406PUF609381.404ENSGAFG00000021040puf60b10083.493Gambusia_affinis
ENSAMEG00000006406PUF609371.078ENSGACG00000004717puf60b9870.588Gasterosteus_aculeatus
ENSAMEG00000006406PUF609369.691ENSGACG00000001484-10068.919Gasterosteus_aculeatus
ENSAMEG00000006406PUF609396.154ENSGAGG00000013289PUF609296.360Gopherus_agassizii
ENSAMEG00000006406PUF609996.953ENSGGOG00000004646PUF609996.953Gorilla_gorilla
ENSAMEG00000006406PUF609379.886ENSHBUG00000009634-9979.886Haplochromis_burtoni
ENSAMEG00000006406PUF609382.353ENSHBUG00000015118puf60b10083.301Haplochromis_burtoni
ENSAMEG00000006406PUF609995.915ENSHGLG00000006111PUF609995.915Heterocephalus_glaber_female
ENSAMEG00000006406PUF609995.915ENSHGLG00100012362PUF609995.915Heterocephalus_glaber_male
ENSAMEG00000006406PUF609380.663ENSHCOG00000015541puf60b10079.705Hippocampus_comes
ENSAMEG00000006406PUF609166.865ENSHCOG00000000378-9965.085Hippocampus_comes
ENSAMEG00000006406PUF609280.151ENSIPUG00000002453puf60a9980.718Ictalurus_punctatus
ENSAMEG00000006406PUF609276.504ENSIPUG00000004660puf60b9976.460Ictalurus_punctatus
ENSAMEG00000006406PUF609997.307ENSSTOG00000025037PUF609997.307Ictidomys_tridecemlineatus
ENSAMEG00000006406PUF609996.257ENSJJAG00000001076Puf609996.257Jaculus_jaculus
ENSAMEG00000006406PUF609282.726ENSKMAG00000016745puf60b10084.069Kryptolebias_marmoratus
ENSAMEG00000006406PUF609277.290ENSKMAG00000010106-10077.230Kryptolebias_marmoratus
ENSAMEG00000006406PUF609683.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSAMEG00000006406PUF606487.603ENSLACG00000005456PUF609987.603Latimeria_chalumnae
ENSAMEG00000006406PUF609587.382ENSLOCG00000010106puf60b9987.452Lepisosteus_oculatus
ENSAMEG00000006406PUF609995.455ENSLAFG00000022929PUF609995.455Loxodonta_africana
ENSAMEG00000006406PUF609996.953ENSMFAG00000043373PUF609997.510Macaca_fascicularis
ENSAMEG00000006406PUF609996.780ENSMMUG00000013558PUF609996.780Macaca_mulatta
ENSAMEG00000006406PUF609996.953ENSMNEG00000031099PUF609996.953Macaca_nemestrina
ENSAMEG00000006406PUF609297.481ENSMLEG00000040009PUF6010097.481Mandrillus_leucophaeus
ENSAMEG00000006406PUF609380.228ENSMAMG00000019476-9980.076Mastacembelus_armatus
ENSAMEG00000006406PUF609482.707ENSMAMG00000010394puf60b10081.682Mastacembelus_armatus
ENSAMEG00000006406PUF609283.109ENSMZEG00005018515puf60b10083.301Maylandia_zebra
ENSAMEG00000006406PUF609380.076ENSMZEG00005019425-9980.076Maylandia_zebra
ENSAMEG00000006406PUF609396.360ENSMGAG00000013070PUF609896.360Meleagris_gallopavo
ENSAMEG00000006406PUF607294.349ENSMAUG00000014267-9994.349Mesocricetus_auratus
ENSAMEG00000006406PUF608879.960ENSMAUG00000018549-9580.202Mesocricetus_auratus
ENSAMEG00000006406PUF609997.307ENSMICG00000012226PUF609997.893Microcebus_murinus
ENSAMEG00000006406PUF609996.223ENSMOCG00000018780Puf609996.223Microtus_ochrogaster
ENSAMEG00000006406PUF609283.493ENSMMOG00000004217puf60b10083.685Mola_mola
ENSAMEG00000006406PUF609471.511ENSMMOG00000018059-9976.322Mola_mola
ENSAMEG00000006406PUF609994.973ENSMODG00000009161PUF609995.153Monodelphis_domestica
ENSAMEG00000006406PUF609379.848ENSMALG00000000200-9978.639Monopterus_albus
ENSAMEG00000006406PUF609478.776ENSMALG00000006797puf60b9978.585Monopterus_albus
ENSAMEG00000006406PUF609995.560MGP_CAROLIEiJ_G0019910Puf609995.560Mus_caroli
ENSAMEG00000006406PUF609995.560ENSMUSG00000002524Puf609995.560Mus_musculus
ENSAMEG00000006406PUF609995.560MGP_PahariEiJ_G0019920Puf609995.560Mus_pahari
ENSAMEG00000006406PUF609995.560MGP_SPRETEiJ_G0020812Puf609995.560Mus_spretus
ENSAMEG00000006406PUF609997.455ENSMPUG00000008137PUF609797.455Mustela_putorius_furo
ENSAMEG00000006406PUF609996.909ENSMLUG00000000238-9896.909Myotis_lucifugus
ENSAMEG00000006406PUF609390.230ENSMLUG00000013032-9890.230Myotis_lucifugus
ENSAMEG00000006406PUF609995.915ENSNGAG00000000712Puf6010097.287Nannospalax_galili
ENSAMEG00000006406PUF607779.688ENSNBRG00000013047puf60b9781.647Neolamprologus_brichardi
ENSAMEG00000006406PUF609380.534ENSNBRG00000017223-9980.228Neolamprologus_brichardi
ENSAMEG00000006406PUF609996.953ENSNLEG00000002156PUF609996.953Nomascus_leucogenys
ENSAMEG00000006406PUF606997.902ENSOPRG00000002147PUF607397.902Ochotona_princeps
ENSAMEG00000006406PUF6074100.000ENSODEG00000014024-99100.000Octodon_degus
ENSAMEG00000006406PUF609073.904ENSODEG00000015513-9971.863Octodon_degus
ENSAMEG00000006406PUF609482.386ENSONIG00000006247puf60b9982.576Oreochromis_niloticus
ENSAMEG00000006406PUF609480.303ENSONIG00000014030-9980.303Oreochromis_niloticus
ENSAMEG00000006406PUF609179.882ENSOANG00000006962PUF609979.290Ornithorhynchus_anatinus
ENSAMEG00000006406PUF609382.543ENSORLG00000012279puf60b10082.917Oryzias_latipes
ENSAMEG00000006406PUF609277.040ENSORLG00000028655-9977.143Oryzias_latipes
ENSAMEG00000006406PUF609376.938ENSORLG00020018144-9877.040Oryzias_latipes_hni
ENSAMEG00000006406PUF609382.543ENSORLG00020007333puf6010082.917Oryzias_latipes_hni
ENSAMEG00000006406PUF609377.186ENSORLG00015016833-9877.290Oryzias_latipes_hsok
ENSAMEG00000006406PUF609381.664ENSORLG00015007718puf60b10082.792Oryzias_latipes_hsok
ENSAMEG00000006406PUF609377.609ENSOMEG00000022185-9877.567Oryzias_melastigma
ENSAMEG00000006406PUF609380.483ENSOMEG00000001643puf60b9981.010Oryzias_melastigma
ENSAMEG00000006406PUF609997.641ENSOGAG00000006259PUF609997.641Otolemur_garnettii
ENSAMEG00000006406PUF609495.946ENSOARG00000016235PUF609995.946Ovis_aries
ENSAMEG00000006406PUF609996.953ENSPPAG00000029933PUF609996.953Pan_paniscus
ENSAMEG00000006406PUF609996.092ENSPPRG00000003257PUF6010097.481Panthera_pardus
ENSAMEG00000006406PUF609994.022ENSPTIG00000009795PUF609995.402Panthera_tigris_altaica
ENSAMEG00000006406PUF609996.774ENSPTRG00000020670PUF609996.774Pan_troglodytes
ENSAMEG00000006406PUF609997.278ENSPTRG00000043963-9997.278Pan_troglodytes
ENSAMEG00000006406PUF609996.953ENSPANG00000021936PUF609996.953Papio_anubis
ENSAMEG00000006406PUF609879.348ENSPKIG00000004295puf60a9989.412Paramormyrops_kingsleyae
ENSAMEG00000006406PUF609384.981ENSPKIG00000012204puf60b10085.962Paramormyrops_kingsleyae
ENSAMEG00000006406PUF609496.176ENSPSIG00000004679PUF609996.176Pelodiscus_sinensis
ENSAMEG00000006406PUF609282.061ENSPMGG00000013444puf60b9982.252Periophthalmus_magnuspinnatus
ENSAMEG00000006406PUF609996.223ENSPEMG00000008820Puf609996.223Peromyscus_maniculatus_bairdii
ENSAMEG00000006406PUF609894.516ENSPCIG00000020270PUF609997.505Phascolarctos_cinereus
ENSAMEG00000006406PUF609381.973ENSPFOG00000019217puf60b10080.038Poecilia_formosa
ENSAMEG00000006406PUF609278.958ENSPFOG00000011118-9779.304Poecilia_formosa
ENSAMEG00000006406PUF609282.726ENSPLAG00000010754puf60b10084.069Poecilia_latipinna
ENSAMEG00000006406PUF609875.730ENSPLAG00000017025-9078.917Poecilia_latipinna
ENSAMEG00000006406PUF609875.730ENSPMEG00000009767-9079.304Poecilia_mexicana
ENSAMEG00000006406PUF609381.973ENSPMEG00000000838puf60b10084.069Poecilia_mexicana
ENSAMEG00000006406PUF609380.222ENSPREG00000005440puf60b9981.331Poecilia_reticulata
ENSAMEG00000006406PUF607595.204ENSPPYG00000018951-9595.204Pongo_abelii
ENSAMEG00000006406PUF607597.122ENSPCAG00000014837PUF6010097.122Procavia_capensis
ENSAMEG00000006406PUF609996.942ENSPCOG00000027981PUF609997.701Propithecus_coquereli
ENSAMEG00000006406PUF6092100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSAMEG00000006406PUF609283.109ENSPNYG00000002556puf60b10083.301Pundamilia_nyererei
ENSAMEG00000006406PUF609380.076ENSPNYG00000004273-9980.076Pundamilia_nyererei
ENSAMEG00000006406PUF609971.629ENSPNAG00000019415puf60b9175.095Pygocentrus_nattereri
ENSAMEG00000006406PUF609380.303ENSPNAG00000019909puf60a9980.151Pygocentrus_nattereri
ENSAMEG00000006406PUF609995.382ENSRNOG00000009960Puf609995.382Rattus_norvegicus
ENSAMEG00000006406PUF609996.953ENSRBIG00000035274PUF609996.953Rhinopithecus_bieti
ENSAMEG00000006406PUF609996.953ENSRROG00000029360PUF609997.510Rhinopithecus_roxellana
ENSAMEG00000006406PUF609696.981ENSSBOG00000027089PUF609898.259Saimiri_boliviensis_boliviensis
ENSAMEG00000006406PUF609094.455ENSSHAG00000006668PUF609694.653Sarcophilus_harrisii
ENSAMEG00000006406PUF609381.703ENSSFOG00015019371puf60a9885.111Scleropages_formosus
ENSAMEG00000006406PUF609280.228ENSSFOG00015019619puf60b9984.211Scleropages_formosus
ENSAMEG00000006406PUF606992.580ENSSMAG00000016381puf60b7492.683Scophthalmus_maximus
ENSAMEG00000006406PUF609381.599ENSSDUG00000009935puf60b9982.222Seriola_dumerili
ENSAMEG00000006406PUF609378.053ENSSDUG00000007048-9878.435Seriola_dumerili
ENSAMEG00000006406PUF609278.368ENSSLDG00000007366-9978.748Seriola_lalandi_dorsalis
ENSAMEG00000006406PUF609383.588ENSSLDG00000024011puf60b10081.869Seriola_lalandi_dorsalis
ENSAMEG00000006406PUF606282.659ENSSPUG00000013518PUF609482.659Sphenodon_punctatus
ENSAMEG00000006406PUF609381.331ENSSPAG00000012144puf60b10082.056Stegastes_partitus
ENSAMEG00000006406PUF609279.962ENSSPAG00000020285-10080.534Stegastes_partitus
ENSAMEG00000006406PUF609996.745ENSSSCG00000038800PUF6010091.898Sus_scrofa
ENSAMEG00000006406PUF609392.912ENSTGUG00000012797-10093.103Taeniopygia_guttata
ENSAMEG00000006406PUF609275.534ENSTRUG00000008843-10075.534Takifugu_rubripes
ENSAMEG00000006406PUF609482.008ENSTRUG00000005420puf60b10080.935Takifugu_rubripes
ENSAMEG00000006406PUF609482.008ENSTNIG00000013675puf60b10082.008Tetraodon_nigroviridis
ENSAMEG00000006406PUF609476.099ENSTNIG00000003069-10076.099Tetraodon_nigroviridis
ENSAMEG00000006406PUF605792.230ENSTBEG00000002751-9992.542Tupaia_belangeri
ENSAMEG00000006406PUF607180.938ENSTBEG00000001899-10081.232Tupaia_belangeri
ENSAMEG00000006406PUF609297.476ENSTTRG00000017088PUF6010097.476Tursiops_truncatus
ENSAMEG00000006406PUF609997.487ENSUAMG00000024917PUF609997.487Ursus_americanus
ENSAMEG00000006406PUF609594.297ENSUMAG00000000272PUF609994.150Ursus_maritimus
ENSAMEG00000006406PUF609998.004ENSVVUG00000022527PUF6010097.868Vulpes_vulpes
ENSAMEG00000006406PUF609491.985ENSXETG00000012469puf609992.176Xenopus_tropicalis
ENSAMEG00000006406PUF609279.463ENSXCOG00000012355puf60b10080.806Xiphophorus_couchianus
ENSAMEG00000006406PUF609381.973ENSXMAG00000001862puf60b10084.069Xiphophorus_maculatus
ENSAMEG00000006406PUF609475.954ENSXMAG00000010507-9975.191Xiphophorus_maculatus

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