EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000006417 (Gene tree)
Gene ID: 100483059
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 12324 bases
Position: chrGL195344.1:16320-28643
Accession: 100483059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000006817	tRNA-synt_1g	PF09334.11	4.9e-11	1	1
ENSAMEP00000006817	Anticodon_1	PF08264.13	2.1e-33	1	1
ENSAMEP00000006817	tRNA-synt_1	PF00133.22	1.5e-201	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000007103	VARS-201	3798	XM_002931067	ENSAMEP00000006817	1265 (aa)	XP_002931113	G1LIR3

Gene Model

Click here to download ENSAMEG00000006417's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000006417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000006417	VARS	81	49.952	ENSAMEG00000012997	VARS2	89	51.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000006417	VARS	100	95.020	ENSG00000204394	VARS	100	98.276	Homo_sapiens
ENSAMEG00000006417	VARS	98	64.904	ENSAPOG00000020691	vars	99	64.503	Acanthochromis_polyacanthus
ENSAMEG00000006417	VARS	98	64.904	ENSAPOG00000020921	vars	99	64.503	Acanthochromis_polyacanthus
ENSAMEG00000006417	VARS	100	65.571	ENSACIG00000013752	vars	100	65.515	Amphilophus_citrinellus
ENSAMEG00000006417	VARS	100	64.884	ENSAOCG00000002447	vars	100	64.308	Amphiprion_ocellaris
ENSAMEG00000006417	VARS	100	64.961	ENSAPEG00000010638	vars	99	64.981	Amphiprion_percula
ENSAMEG00000006417	VARS	100	64.724	ENSATEG00000020219	vars	100	64.567	Anabas_testudineus
ENSAMEG00000006417	VARS	90	70.451	ENSACAG00000029133	-	99	70.277	Anolis_carolinensis
ENSAMEG00000006417	VARS	100	94.862	ENSANAG00000015453	VARS	100	94.862	Aotus_nancymaae
ENSAMEG00000006417	VARS	100	64.811	ENSACLG00000025699	vars	97	64.752	Astatotilapia_calliptera
ENSAMEG00000006417	VARS	94	66.333	ENSAMXG00000017716	vars	95	66.333	Astyanax_mexicanus
ENSAMEG00000006417	VARS	100	95.257	ENSBTAG00000005631	VARS	100	95.257	Bos_taurus
ENSAMEG00000006417	VARS	100	94.783	ENSCJAG00000002604	VARS	100	94.783	Callithrix_jacchus
ENSAMEG00000006417	VARS	100	96.285	ENSCAFG00000000636	VARS	100	96.285	Canis_familiaris
ENSAMEG00000006417	VARS	94	96.287	ENSCAFG00020020790	VARS	96	96.287	Canis_lupus_dingo
ENSAMEG00000006417	VARS	100	95.573	ENSCHIG00000011008	VARS	100	95.573	Capra_hircus
ENSAMEG00000006417	VARS	100	94.704	ENSTSYG00000001567	VARS	100	94.704	Carlito_syrichta
ENSAMEG00000006417	VARS	91	90.493	ENSCAPG00000013736	VARS	99	90.493	Cavia_aperea
ENSAMEG00000006417	VARS	100	91.462	ENSCPOG00000000870	VARS	100	91.462	Cavia_porcellus
ENSAMEG00000006417	VARS	100	94.862	ENSCCAG00000035656	VARS	100	95.025	Cebus_capucinus
ENSAMEG00000006417	VARS	100	95.020	ENSCATG00000022394	VARS	100	95.020	Cercocebus_atys
ENSAMEG00000006417	VARS	88	89.598	ENSCLAG00000009470	VARS	92	89.598	Chinchilla_lanigera
ENSAMEG00000006417	VARS	100	95.178	ENSCSAG00000008784	VARS	100	95.178	Chlorocebus_sabaeus
ENSAMEG00000006417	VARS	78	73.652	ENSCPBG00000007943	VARS	96	74.154	Chrysemys_picta_bellii
ENSAMEG00000006417	VARS	100	95.099	ENSCANG00000033570	VARS	100	95.099	Colobus_angolensis_palliatus
ENSAMEG00000006417	VARS	100	92.727	ENSCGRG00001005686	Vars	100	92.727	Cricetulus_griseus_chok1gshd
ENSAMEG00000006417	VARS	92	87.699	ENSCGRG00000013352	Vars	78	87.699	Cricetulus_griseus_crigri
ENSAMEG00000006417	VARS	100	64.060	ENSCSEG00000019652	vars	100	64.139	Cynoglossus_semilaevis
ENSAMEG00000006417	VARS	100	65.352	ENSCVAG00000022398	vars	100	65.295	Cyprinodon_variegatus
ENSAMEG00000006417	VARS	100	64.679	ENSDARG00000044575	vars	100	64.674	Danio_rerio
ENSAMEG00000006417	VARS	84	92.387	ENSDORG00000016433	Vars	95	92.387	Dipodomys_ordii
ENSAMEG00000006417	VARS	69	86.643	ENSETEG00000003824	VARS	77	86.643	Echinops_telfairi
ENSAMEG00000006417	VARS	57	62.225	ENSEBUG00000004637	vars	100	62.500	Eptatretus_burgeri
ENSAMEG00000006417	VARS	50	70.962	ENSEBUG00000007086	vars	84	69.808	Eptatretus_burgeri
ENSAMEG00000006417	VARS	100	96.126	ENSEASG00005015673	VARS	100	96.126	Equus_asinus_asinus
ENSAMEG00000006417	VARS	100	95.182	ENSECAG00000014620	VARS	100	95.577	Equus_caballus
ENSAMEG00000006417	VARS	83	91.349	ENSEEUG00000004116	VARS	83	91.349	Erinaceus_europaeus
ENSAMEG00000006417	VARS	100	64.330	ENSELUG00000006550	vars	97	64.280	Esox_lucius
ENSAMEG00000006417	VARS	100	96.759	ENSFCAG00000004510	VARS	100	96.759	Felis_catus
ENSAMEG00000006417	VARS	82	92.070	ENSFDAG00000011401	VARS	100	92.070	Fukomys_damarensis
ENSAMEG00000006417	VARS	100	65.275	ENSFHEG00000010672	vars	100	65.295	Fundulus_heteroclitus
ENSAMEG00000006417	VARS	92	66.251	ENSGMOG00000014908	vars	97	66.251	Gadus_morhua
ENSAMEG00000006417	VARS	100	65.531	ENSGAFG00000021630	vars	100	65.474	Gambusia_affinis
ENSAMEG00000006417	VARS	92	66.611	ENSGACG00000009601	vars	98	66.195	Gasterosteus_aculeatus
ENSAMEG00000006417	VARS	50	64.511	ENSGAGG00000006508	-	91	64.038	Gopherus_agassizii
ENSAMEG00000006417	VARS	100	95.020	ENSGGOG00000011364	VARS	100	95.020	Gorilla_gorilla
ENSAMEG00000006417	VARS	100	64.811	ENSHBUG00000017151	vars	97	64.752	Haplochromis_burtoni
ENSAMEG00000006417	VARS	100	90.356	ENSHGLG00000011646	VARS	100	90.198	Heterocephalus_glaber_female
ENSAMEG00000006417	VARS	93	83.071	ENSHGLG00100018062	VARS	100	83.071	Heterocephalus_glaber_male
ENSAMEG00000006417	VARS	99	64.833	ENSHCOG00000012198	vars	99	64.774	Hippocampus_comes
ENSAMEG00000006417	VARS	100	65.319	ENSIPUG00000005218	vars	100	65.319	Ictalurus_punctatus
ENSAMEG00000006417	VARS	100	94.155	ENSSTOG00000013112	VARS	100	94.155	Ictidomys_tridecemlineatus
ENSAMEG00000006417	VARS	100	91.621	ENSJJAG00000019749	-	100	91.146	Jaculus_jaculus
ENSAMEG00000006417	VARS	100	72.727	ENSJJAG00000015343	-	99	73.917	Jaculus_jaculus
ENSAMEG00000006417	VARS	100	65.272	ENSKMAG00000009455	vars	100	65.272	Kryptolebias_marmoratus
ENSAMEG00000006417	VARS	100	63.823	ENSLBEG00000010341	vars	100	64.534	Labrus_bergylta
ENSAMEG00000006417	VARS	94	61.873	ENSLACG00000015232	VARS	99	62.120	Latimeria_chalumnae
ENSAMEG00000006417	VARS	100	66.511	ENSLOCG00000004240	vars	100	66.432	Lepisosteus_oculatus
ENSAMEG00000006417	VARS	100	93.913	ENSLAFG00000023090	VARS	100	93.676	Loxodonta_africana
ENSAMEG00000006417	VARS	100	95.099	ENSMFAG00000001032	VARS	100	95.099	Macaca_fascicularis
ENSAMEG00000006417	VARS	100	95.099	ENSMMUG00000006828	VARS	100	95.099	Macaca_mulatta
ENSAMEG00000006417	VARS	100	95.257	ENSMNEG00000042072	VARS	100	95.257	Macaca_nemestrina
ENSAMEG00000006417	VARS	100	95.020	ENSMLEG00000039307	VARS	100	95.020	Mandrillus_leucophaeus
ENSAMEG00000006417	VARS	100	64.984	ENSMAMG00000003949	vars	100	65.160	Mastacembelus_armatus
ENSAMEG00000006417	VARS	100	64.811	ENSMZEG00005018327	vars	100	64.432	Maylandia_zebra
ENSAMEG00000006417	VARS	100	92.648	ENSMAUG00000006715	Vars	100	92.648	Mesocricetus_auratus
ENSAMEG00000006417	VARS	100	93.597	ENSMICG00000003548	VARS	100	94.030	Microcebus_murinus
ENSAMEG00000006417	VARS	100	89.723	ENSMOCG00000015404	Vars	100	89.565	Microtus_ochrogaster
ENSAMEG00000006417	VARS	100	64.415	ENSMMOG00000015801	vars	100	64.258	Mola_mola
ENSAMEG00000006417	VARS	100	86.087	ENSMODG00000015204	-	100	86.087	Monodelphis_domestica
ENSAMEG00000006417	VARS	99	64.961	ENSMALG00000022532	vars	99	64.701	Monopterus_albus
ENSAMEG00000006417	VARS	100	93.360	MGP_CAROLIEiJ_G0021491	Vars	100	93.202	Mus_caroli
ENSAMEG00000006417	VARS	100	93.202	ENSMUSG00000007029	Vars	100	93.043	Mus_musculus
ENSAMEG00000006417	VARS	100	92.569	MGP_PahariEiJ_G0020486	Vars	100	92.490	Mus_pahari
ENSAMEG00000006417	VARS	100	93.281	MGP_SPRETEiJ_G0022396	Vars	100	93.123	Mus_spretus
ENSAMEG00000006417	VARS	100	97.312	ENSMPUG00000010821	VARS	100	97.312	Mustela_putorius_furo
ENSAMEG00000006417	VARS	78	93.630	ENSMLUG00000013126	VARS	100	94.135	Myotis_lucifugus
ENSAMEG00000006417	VARS	100	92.332	ENSNGAG00000012151	Vars	100	92.727	Nannospalax_galili
ENSAMEG00000006417	VARS	100	64.733	ENSNBRG00000020520	vars	100	64.674	Neolamprologus_brichardi
ENSAMEG00000006417	VARS	100	94.625	ENSNLEG00000006351	VARS	100	94.625	Nomascus_leucogenys
ENSAMEG00000006417	VARS	100	82.767	ENSMEUG00000011378	VARS	100	82.767	Notamacropus_eugenii
ENSAMEG00000006417	VARS	100	93.043	ENSOPRG00000003607	VARS	100	93.043	Ochotona_princeps
ENSAMEG00000006417	VARS	100	91.067	ENSODEG00000017681	VARS	100	90.751	Octodon_degus
ENSAMEG00000006417	VARS	100	65.183	ENSONIG00000013064	vars	99	68.115	Oreochromis_niloticus
ENSAMEG00000006417	VARS	77	79.335	ENSOANG00000005400	VARS	98	78.622	Ornithorhynchus_anatinus
ENSAMEG00000006417	VARS	100	91.081	ENSOCUG00000022463	VARS	100	91.318	Oryctolagus_cuniculus
ENSAMEG00000006417	VARS	100	64.828	ENSORLG00000013063	vars	100	64.846	Oryzias_latipes
ENSAMEG00000006417	VARS	100	65.157	ENSORLG00020003504	vars	100	65.177	Oryzias_latipes_hni
ENSAMEG00000006417	VARS	100	65.275	ENSORLG00015009001	vars	100	65.275	Oryzias_latipes_hsok
ENSAMEG00000006417	VARS	100	64.842	ENSOMEG00000015016	vars	100	64.842	Oryzias_melastigma
ENSAMEG00000006417	VARS	100	93.992	ENSOGAG00000007515	VARS	100	93.992	Otolemur_garnettii
ENSAMEG00000006417	VARS	100	95.257	ENSPPAG00000034012	VARS	100	95.257	Pan_paniscus
ENSAMEG00000006417	VARS	100	96.917	ENSPPRG00000014855	VARS	100	96.917	Panthera_pardus
ENSAMEG00000006417	VARS	86	97.250	ENSPTIG00000010462	VARS	95	97.250	Panthera_tigris_altaica
ENSAMEG00000006417	VARS	100	95.178	ENSPTRG00000017985	VARS	100	95.178	Pan_troglodytes
ENSAMEG00000006417	VARS	100	93.459	ENSPANG00000014565	VARS	100	93.459	Papio_anubis
ENSAMEG00000006417	VARS	100	63.657	ENSPKIG00000016304	vars	100	63.657	Paramormyrops_kingsleyae
ENSAMEG00000006417	VARS	100	65.591	ENSPMGG00000023909	vars	100	65.669	Periophthalmus_magnuspinnatus
ENSAMEG00000006417	VARS	100	93.518	ENSPEMG00000006639	Vars	100	93.518	Peromyscus_maniculatus_bairdii
ENSAMEG00000006417	VARS	100	86.087	ENSPCIG00000018553	VARS	100	86.087	Phascolarctos_cinereus
ENSAMEG00000006417	VARS	100	65.763	ENSPFOG00000015690	vars	100	65.708	Poecilia_formosa
ENSAMEG00000006417	VARS	100	66.274	ENSPLAG00000009590	vars	100	65.959	Poecilia_latipinna
ENSAMEG00000006417	VARS	100	65.763	ENSPMEG00000004708	vars	100	65.708	Poecilia_mexicana
ENSAMEG00000006417	VARS	100	64.123	ENSPREG00000013264	vars	100	64.044	Poecilia_reticulata
ENSAMEG00000006417	VARS	100	93.360	ENSPPYG00000016460	VARS	100	93.360	Pongo_abelii
ENSAMEG00000006417	VARS	86	92.280	ENSPCAG00000013565	VARS	86	92.280	Procavia_capensis
ENSAMEG00000006417	VARS	100	93.918	ENSPCOG00000010942	VARS	100	94.313	Propithecus_coquereli
ENSAMEG00000006417	VARS	100	91.304	ENSPVAG00000012403	VARS	100	91.304	Pteropus_vampyrus
ENSAMEG00000006417	VARS	100	64.811	ENSPNYG00000022511	vars	100	64.752	Pundamilia_nyererei
ENSAMEG00000006417	VARS	100	65.194	ENSPNAG00000020962	vars	100	65.116	Pygocentrus_nattereri
ENSAMEG00000006417	VARS	100	93.755	ENSRNOG00000000867	Vars	100	93.755	Rattus_norvegicus
ENSAMEG00000006417	VARS	100	95.257	ENSRBIG00000041669	VARS	100	95.257	Rhinopithecus_bieti
ENSAMEG00000006417	VARS	100	95.257	ENSRROG00000045490	VARS	100	95.257	Rhinopithecus_roxellana
ENSAMEG00000006417	VARS	100	94.625	ENSSBOG00000035402	VARS	100	94.625	Saimiri_boliviensis_boliviensis
ENSAMEG00000006417	VARS	100	80.926	ENSSHAG00000006937	VARS	100	81.162	Sarcophilus_harrisii
ENSAMEG00000006417	VARS	100	64.247	ENSSFOG00015014272	vars	100	64.170	Scleropages_formosus
ENSAMEG00000006417	VARS	100	63.749	ENSSMAG00000009596	vars	99	63.721	Scophthalmus_maximus
ENSAMEG00000006417	VARS	100	64.633	ENSSDUG00000014177	vars	100	64.574	Seriola_dumerili
ENSAMEG00000006417	VARS	100	64.479	ENSSLDG00000025316	vars	100	64.419	Seriola_lalandi_dorsalis
ENSAMEG00000006417	VARS	100	64.907	ENSSPAG00000017068	vars	100	64.981	Stegastes_partitus
ENSAMEG00000006417	VARS	100	93.523	ENSSSCG00000038950	VARS	100	93.918	Sus_scrofa
ENSAMEG00000006417	VARS	81	65.082	ENSTRUG00000012307	vars	96	65.024	Takifugu_rubripes
ENSAMEG00000006417	VARS	100	65.129	ENSTNIG00000008011	vars	100	65.047	Tetraodon_nigroviridis
ENSAMEG00000006417	VARS	54	97.004	ENSTBEG00000004728	-	60	97.004	Tupaia_belangeri
ENSAMEG00000006417	VARS	100	86.640	ENSTTRG00000014128	VARS	100	86.640	Tursiops_truncatus
ENSAMEG00000006417	VARS	100	94.187	ENSUAMG00000010424	VARS	100	94.187	Ursus_americanus
ENSAMEG00000006417	VARS	93	98.574	ENSUMAG00000013486	VARS	98	98.574	Ursus_maritimus
ENSAMEG00000006417	VARS	100	96.130	ENSVVUG00000021323	VARS	100	96.130	Vulpes_vulpes
ENSAMEG00000006417	VARS	96	63.166	ENSXETG00000024076	vars	98	62.571	Xenopus_tropicalis
ENSAMEG00000006417	VARS	100	65.303	ENSXCOG00000019172	vars	100	65.303	Xiphophorus_couchianus
ENSAMEG00000006417	VARS	100	65.474	ENSXMAG00000010927	vars	100	65.474	Xiphophorus_maculatus