EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000006904 (Gene tree)
Gene ID: 100472614
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 4223 bases
Position: chrGL192844.1:481260-485482
Accession: 100472614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000007271	zf-C2H2	PF00096.26	3.1e-40	1	7
ENSAMEP00000007271	zf-C2H2	PF00096.26	3.1e-40	2	7
ENSAMEP00000007271	zf-C2H2	PF00096.26	3.1e-40	3	7
ENSAMEP00000007271	zf-C2H2	PF00096.26	3.1e-40	4	7
ENSAMEP00000007271	zf-C2H2	PF00096.26	3.1e-40	5	7
ENSAMEP00000007271	zf-C2H2	PF00096.26	3.1e-40	6	7
ENSAMEP00000007271	zf-C2H2	PF00096.26	3.1e-40	7	7
ENSAMEP00000007271	zf-met	PF12874.7	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000007578	ZNF408-201	2160	-	ENSAMEP00000007271	719 (aa)	XP_002921670	G1LK11

Gene Model

Click here to download ENSAMEG00000006904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000006904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000006904	ZNF408	63	37.339	ENSAMEG00000002368	-	84	35.985
ENSAMEG00000006904	ZNF408	55	42.623	ENSAMEG00000003482	ZNF628	59	38.674
ENSAMEG00000006904	ZNF408	54	36.755	ENSAMEG00000009560	ZNF582	58	38.163
ENSAMEG00000006904	ZNF408	51	41.000	ENSAMEG00000014454	-	97	39.576
ENSAMEG00000006904	ZNF408	50	34.686	ENSAMEG00000017202	ZNF319	84	33.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000006904	ZNF408	98	81.180	ENSG00000175213	ZNF408	100	80.854	Homo_sapiens
ENSAMEG00000006904	ZNF408	98	75.804	ENSANAG00000036294	ZNF408	100	74.457	Aotus_nancymaae
ENSAMEG00000006904	ZNF408	93	38.520	ENSAMXG00000032642	znf408	84	44.062	Astyanax_mexicanus
ENSAMEG00000006904	ZNF408	98	80.056	ENSCJAG00000019859	ZNF408	100	79.614	Callithrix_jacchus
ENSAMEG00000006904	ZNF408	100	87.243	ENSCAFG00000009143	ZNF408	97	87.791	Canis_familiaris
ENSAMEG00000006904	ZNF408	100	87.106	ENSCAFG00020019155	ZNF408	97	87.654	Canis_lupus_dingo
ENSAMEG00000006904	ZNF408	82	79.160	ENSCHIG00000025346	ZNF408	97	79.496	Capra_hircus
ENSAMEG00000006904	ZNF408	100	77.931	ENSTSYG00000025443	ZNF408	100	78.207	Carlito_syrichta
ENSAMEG00000006904	ZNF408	98	79.494	ENSCCAG00000029472	ZNF408	100	78.926	Cebus_capucinus
ENSAMEG00000006904	ZNF408	55	95.862	ENSCHOG00000009909	ZNF408	75	95.862	Choloepus_hoffmanni
ENSAMEG00000006904	ZNF408	100	69.421	ENSCGRG00001023588	Zfp408	100	69.146	Cricetulus_griseus_chok1gshd
ENSAMEG00000006904	ZNF408	100	69.421	ENSCGRG00000017618	Zfp408	100	69.146	Cricetulus_griseus_crigri
ENSAMEG00000006904	ZNF408	100	75.034	ENSDNOG00000047669	ZNF408	100	75.310	Dasypus_novemcinctus
ENSAMEG00000006904	ZNF408	99	69.705	ENSDORG00000000387	Zfp408	99	69.705	Dipodomys_ordii
ENSAMEG00000006904	ZNF408	89	62.522	ENSETEG00000017621	-	100	63.009	Echinops_telfairi
ENSAMEG00000006904	ZNF408	100	80.966	ENSEASG00005015461	ZNF408	100	80.966	Equus_asinus_asinus
ENSAMEG00000006904	ZNF408	100	80.966	ENSECAG00000010878	ZNF408	100	80.966	Equus_caballus
ENSAMEG00000006904	ZNF408	100	66.759	ENSEEUG00000010466	ZNF408	100	66.898	Erinaceus_europaeus
ENSAMEG00000006904	ZNF408	100	86.069	ENSFCAG00000029105	ZNF408	100	86.069	Felis_catus
ENSAMEG00000006904	ZNF408	93	35.302	ENSGAFG00000018557	-	59	46.539	Gambusia_affinis
ENSAMEG00000006904	ZNF408	98	81.039	ENSGGOG00000010152	ZNF408	100	80.716	Gorilla_gorilla
ENSAMEG00000006904	ZNF408	86	79.615	ENSLAFG00000027848	ZNF408	100	79.615	Loxodonta_africana
ENSAMEG00000006904	ZNF408	99	82.238	ENSMICG00000045320	ZNF408	100	82.069	Microcebus_murinus
ENSAMEG00000006904	ZNF408	73	54.198	ENSMODG00000019895	-	88	54.523	Monodelphis_domestica
ENSAMEG00000006904	ZNF408	98	87.500	ENSMPUG00000005490	ZNF408	100	87.293	Mustela_putorius_furo
ENSAMEG00000006904	ZNF408	99	69.819	ENSNGAG00000000309	Zfp408	99	69.958	Nannospalax_galili
ENSAMEG00000006904	ZNF408	100	80.303	ENSNLEG00000014132	ZNF408	100	80.441	Nomascus_leucogenys
ENSAMEG00000006904	ZNF408	99	63.128	ENSOPRG00000009225	ZNF408	99	62.849	Ochotona_princeps
ENSAMEG00000006904	ZNF408	100	75.310	ENSOCUG00000010953	ZNF408	100	75.310	Oryctolagus_cuniculus
ENSAMEG00000006904	ZNF408	86	81.380	ENSOGAG00000034080	ZNF408	100	81.380	Otolemur_garnettii
ENSAMEG00000006904	ZNF408	98	81.461	ENSPPAG00000034993	ZNF408	100	81.129	Pan_paniscus
ENSAMEG00000006904	ZNF408	100	86.207	ENSPPRG00000016866	ZNF408	100	86.207	Panthera_pardus
ENSAMEG00000006904	ZNF408	100	87.034	ENSPTIG00000015467	ZNF408	100	87.034	Panthera_tigris_altaica
ENSAMEG00000006904	ZNF408	98	81.601	ENSPTRG00000003551	ZNF408	100	81.267	Pan_troglodytes
ENSAMEG00000006904	ZNF408	77	71.607	ENSPEMG00000016757	Zfp408	99	71.607	Peromyscus_maniculatus_bairdii
ENSAMEG00000006904	ZNF408	93	35.890	ENSPFOG00000001760	-	92	49.610	Poecilia_formosa
ENSAMEG00000006904	ZNF408	52	50.263	ENSPMEG00000021147	-	72	50.263	Poecilia_mexicana
ENSAMEG00000006904	ZNF408	93	35.733	ENSPREG00000017068	-	59	46.778	Poecilia_reticulata
ENSAMEG00000006904	ZNF408	98	80.481	ENSPPYG00000003318	ZNF408	100	80.731	Pongo_abelii
ENSAMEG00000006904	ZNF408	100	74.862	ENSPCAG00000014001	ZNF408	100	74.724	Procavia_capensis
ENSAMEG00000006904	ZNF408	99	82.542	ENSPCOG00000028698	ZNF408	100	82.369	Propithecus_coquereli
ENSAMEG00000006904	ZNF408	100	83.611	ENSPVAG00000015791	ZNF408	100	83.611	Pteropus_vampyrus
ENSAMEG00000006904	ZNF408	98	79.102	ENSSBOG00000033023	ZNF408	100	78.897	Saimiri_boliviensis_boliviensis
ENSAMEG00000006904	ZNF408	100	81.103	ENSSSCG00000023097	ZNF408	97	81.103	Sus_scrofa
ENSAMEG00000006904	ZNF408	76	90.119	ENSTBEG00000004260	ZNF408	83	90.119	Tupaia_belangeri
ENSAMEG00000006904	ZNF408	100	96.801	ENSUAMG00000026154	ZNF408	100	96.801	Ursus_americanus
ENSAMEG00000006904	ZNF408	100	96.662	ENSUMAG00000014405	ZNF408	100	96.662	Ursus_maritimus
ENSAMEG00000006904	ZNF408	100	86.831	ENSVVUG00000026805	ZNF408	97	87.106	Vulpes_vulpes
ENSAMEG00000006904	ZNF408	51	55.673	ENSXETG00000001980	znf408	100	55.145	Xenopus_tropicalis
ENSAMEG00000006904	ZNF408	52	49.868	ENSXCOG00000002869	-	75	48.446	Xiphophorus_couchianus
ENSAMEG00000006904	ZNF408	52	49.604	ENSXMAG00000018347	-	72	49.604	Xiphophorus_maculatus