EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000007034 (Gene tree)
Gene ID: 100464706
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 4076 bases
Position: chrGL194586.1:77199-81274
Accession: 11164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000007414	LSM	PF01423.22	5.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000007724	SNRPN-201	735	-	ENSAMEP00000007414	244 (aa)	-	G1LKF4

Gene Model

Click here to download ENSAMEG00000007034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000007034's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000007034	SNRPN	91	92.308	ENSAMEG00000011353	SNRPB	92	91.518

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000007034	SNRPN	98	99.583	ENSG00000128739	SNRPN	99	100.000	Homo_sapiens
ENSAMEG00000007034	SNRPN	98	99.583	ENSANAG00000034241	SNRPN	100	99.583	Aotus_nancymaae
ENSAMEG00000007034	SNRPN	98	99.163	ENSBTAG00000008251	SNRPN	99	99.163	Bos_taurus
ENSAMEG00000007034	SNRPN	93	99.119	ENSCJAG00000042622	-	95	99.119	Callithrix_jacchus
ENSAMEG00000007034	SNRPN	98	99.582	ENSCJAG00000003759	-	99	99.582	Callithrix_jacchus
ENSAMEG00000007034	SNRPN	98	100.000	ENSCAFG00000010127	SNRPN	99	100.000	Canis_familiaris
ENSAMEG00000007034	SNRPN	98	100.000	ENSCAFG00020024075	SNRPN	99	100.000	Canis_lupus_dingo
ENSAMEG00000007034	SNRPN	98	99.163	ENSCHIG00000017477	SNRPN	99	99.163	Capra_hircus
ENSAMEG00000007034	SNRPN	98	99.582	ENSTSYG00000005248	SNRPN	99	99.582	Carlito_syrichta
ENSAMEG00000007034	SNRPN	99	98.755	ENSCAPG00000003047	SNRPN	99	99.582	Cavia_aperea
ENSAMEG00000007034	SNRPN	99	98.755	ENSCPOG00000020270	SNRPN	99	99.582	Cavia_porcellus
ENSAMEG00000007034	SNRPN	98	99.583	ENSCCAG00000024231	SNRPN	99	99.582	Cebus_capucinus
ENSAMEG00000007034	SNRPN	98	99.583	ENSCATG00000032518	SNRPN	99	99.582	Cercocebus_atys
ENSAMEG00000007034	SNRPN	98	99.582	ENSCLAG00000011376	SNRPN	99	99.582	Chinchilla_lanigera
ENSAMEG00000007034	SNRPN	98	99.582	ENSCSAG00000006406	SNRPN	99	99.582	Chlorocebus_sabaeus
ENSAMEG00000007034	SNRPN	99	95.851	ENSCHOG00000001846	SNRPN	91	95.851	Choloepus_hoffmanni
ENSAMEG00000007034	SNRPN	98	99.583	ENSCANG00000041156	SNRPN	99	99.582	Colobus_angolensis_palliatus
ENSAMEG00000007034	SNRPN	99	98.354	ENSCGRG00001004136	Snrpn	99	99.163	Cricetulus_griseus_chok1gshd
ENSAMEG00000007034	SNRPN	99	97.942	ENSCGRG00000001621	Snrpn	99	98.745	Cricetulus_griseus_crigri
ENSAMEG00000007034	SNRPN	70	92.442	ENSCVAG00000014193	SNRPN	69	92.814	Cyprinodon_variegatus
ENSAMEG00000007034	SNRPN	98	98.333	ENSDNOG00000037060	SNRPN	98	98.333	Dasypus_novemcinctus
ENSAMEG00000007034	SNRPN	98	99.163	ENSDORG00000004527	Snrpn	99	99.163	Dipodomys_ordii
ENSAMEG00000007034	SNRPN	98	100.000	ENSEASG00005017871	SNRPN	99	100.000	Equus_asinus_asinus
ENSAMEG00000007034	SNRPN	98	100.000	ENSECAG00000018148	SNRPN	99	100.000	Equus_caballus
ENSAMEG00000007034	SNRPN	98	99.163	ENSEEUG00000007440	-	100	99.163	Erinaceus_europaeus
ENSAMEG00000007034	SNRPN	98	100.000	ENSFCAG00000022298	-	99	100.000	Felis_catus
ENSAMEG00000007034	SNRPN	98	99.163	ENSFDAG00000016578	-	99	99.163	Fukomys_damarensis
ENSAMEG00000007034	SNRPN	75	85.792	ENSFDAG00000010528	-	86	83.333	Fukomys_damarensis
ENSAMEG00000007034	SNRPN	74	76.111	ENSGMOG00000018161	SNRPN	93	73.113	Gadus_morhua
ENSAMEG00000007034	SNRPN	88	73.023	ENSGGOG00000024469	-	92	75.369	Gorilla_gorilla
ENSAMEG00000007034	SNRPN	98	99.583	ENSGGOG00000003988	SNRPN	99	99.582	Gorilla_gorilla
ENSAMEG00000007034	SNRPN	98	84.937	ENSHGLG00000002327	-	91	84.545	Heterocephalus_glaber_female
ENSAMEG00000007034	SNRPN	88	80.841	ENSHGLG00000020936	-	87	80.189	Heterocephalus_glaber_female
ENSAMEG00000007034	SNRPN	98	99.582	ENSHGLG00000011924	SNRPN	99	99.582	Heterocephalus_glaber_female
ENSAMEG00000007034	SNRPN	87	90.094	ENSHGLG00000019812	-	88	90.566	Heterocephalus_glaber_female
ENSAMEG00000007034	SNRPN	87	90.094	ENSHGLG00100021056	-	88	90.566	Heterocephalus_glaber_male
ENSAMEG00000007034	SNRPN	98	99.582	ENSHGLG00100016559	SNRPN	99	99.582	Heterocephalus_glaber_male
ENSAMEG00000007034	SNRPN	98	82.427	ENSHGLG00100004881	-	91	82.727	Heterocephalus_glaber_male
ENSAMEG00000007034	SNRPN	98	99.582	ENSSTOG00000001339	SNRPN	99	99.582	Ictidomys_tridecemlineatus
ENSAMEG00000007034	SNRPN	98	99.167	ENSLAFG00000009458	SNRPN	100	99.167	Loxodonta_africana
ENSAMEG00000007034	SNRPN	98	99.583	ENSMFAG00000042235	SNRPN	99	99.582	Macaca_fascicularis
ENSAMEG00000007034	SNRPN	98	99.583	ENSMMUG00000023139	SNURF	99	99.582	Macaca_mulatta
ENSAMEG00000007034	SNRPN	98	99.583	ENSMNEG00000031291	SNRPN	99	99.582	Macaca_nemestrina
ENSAMEG00000007034	SNRPN	98	99.583	ENSMLEG00000038837	SNRPN	99	99.582	Mandrillus_leucophaeus
ENSAMEG00000007034	SNRPN	90	85.455	ENSMGAG00000008696	SNRPN	92	85.068	Meleagris_gallopavo
ENSAMEG00000007034	SNRPN	98	99.582	ENSMAUG00000000051	Snrpn	99	99.582	Mesocricetus_auratus
ENSAMEG00000007034	SNRPN	98	99.582	ENSMICG00000042356	SNRPN	99	99.582	Microcebus_murinus
ENSAMEG00000007034	SNRPN	98	99.582	ENSMOCG00000015350	Snrpn	99	99.582	Microtus_ochrogaster
ENSAMEG00000007034	SNRPN	90	93.636	ENSMODG00000013926	-	92	93.636	Monodelphis_domestica
ENSAMEG00000007034	SNRPN	98	99.582	MGP_CAROLIEiJ_G0029815	Snrpn	99	99.582	Mus_caroli
ENSAMEG00000007034	SNRPN	98	99.582	ENSMUSG00000102252	Snrpn	99	99.582	Mus_musculus
ENSAMEG00000007034	SNRPN	98	99.582	MGP_PahariEiJ_G0013040	Snrpn	99	99.582	Mus_pahari
ENSAMEG00000007034	SNRPN	98	99.582	MGP_SPRETEiJ_G0030918	Snrpn	99	99.582	Mus_spretus
ENSAMEG00000007034	SNRPN	98	100.000	ENSMPUG00000014638	-	99	100.000	Mustela_putorius_furo
ENSAMEG00000007034	SNRPN	86	50.476	ENSMPUG00000007115	-	63	70.213	Mustela_putorius_furo
ENSAMEG00000007034	SNRPN	99	98.765	ENSMLUG00000023361	-	99	98.765	Myotis_lucifugus
ENSAMEG00000007034	SNRPN	84	60.784	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSAMEG00000007034	SNRPN	93	61.842	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSAMEG00000007034	SNRPN	98	99.582	ENSNGAG00000000181	Snrpn	99	99.582	Nannospalax_galili
ENSAMEG00000007034	SNRPN	99	82.573	ENSNLEG00000001376	SNRPN	100	82.573	Nomascus_leucogenys
ENSAMEG00000007034	SNRPN	98	99.163	ENSODEG00000013478	-	99	99.163	Octodon_degus
ENSAMEG00000007034	SNRPN	98	95.798	ENSODEG00000019708	-	92	99.087	Octodon_degus
ENSAMEG00000007034	SNRPN	98	98.745	ENSODEG00000020110	-	99	98.745	Octodon_degus
ENSAMEG00000007034	SNRPN	96	81.624	ENSODEG00000016065	-	87	82.609	Octodon_degus
ENSAMEG00000007034	SNRPN	98	99.167	ENSOCUG00000003532	-	99	99.167	Oryctolagus_cuniculus
ENSAMEG00000007034	SNRPN	72	92.000	ENSORLG00020007490	SNRPN	69	93.413	Oryzias_latipes_hni
ENSAMEG00000007034	SNRPN	72	92.000	ENSORLG00015003332	SNRPN	69	93.413	Oryzias_latipes_hsok
ENSAMEG00000007034	SNRPN	72	92.571	ENSOMEG00000002066	SNRPN	69	94.012	Oryzias_melastigma
ENSAMEG00000007034	SNRPN	98	99.582	ENSOGAG00000007392	SNRPN	99	99.582	Otolemur_garnettii
ENSAMEG00000007034	SNRPN	98	99.163	ENSOARG00000009080	SNRPN	99	99.163	Ovis_aries
ENSAMEG00000007034	SNRPN	95	68.803	ENSPPAG00000034049	-	86	71.770	Pan_paniscus
ENSAMEG00000007034	SNRPN	98	99.583	ENSPPAG00000027650	SNRPN	99	99.582	Pan_paniscus
ENSAMEG00000007034	SNRPN	98	100.000	ENSPPRG00000019878	-	99	100.000	Panthera_pardus
ENSAMEG00000007034	SNRPN	84	64.390	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSAMEG00000007034	SNRPN	98	99.582	ENSPTIG00000004537	SNRPN	99	99.582	Panthera_tigris_altaica
ENSAMEG00000007034	SNRPN	98	99.583	ENSPTRG00000006826	SNRPN	99	99.582	Pan_troglodytes
ENSAMEG00000007034	SNRPN	95	69.231	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSAMEG00000007034	SNRPN	98	99.583	ENSPANG00000020142	SNRPN	99	99.582	Papio_anubis
ENSAMEG00000007034	SNRPN	93	95.154	ENSPEMG00000020979	-	95	95.154	Peromyscus_maniculatus_bairdii
ENSAMEG00000007034	SNRPN	90	86.364	ENSPEMG00000013920	-	91	86.818	Peromyscus_maniculatus_bairdii
ENSAMEG00000007034	SNRPN	98	99.582	ENSPEMG00000012911	-	99	99.582	Peromyscus_maniculatus_bairdii
ENSAMEG00000007034	SNRPN	91	94.570	ENSPCIG00000004699	-	71	94.570	Phascolarctos_cinereus
ENSAMEG00000007034	SNRPN	70	92.442	ENSPMEG00000020674	SNRPN	69	93.413	Poecilia_mexicana
ENSAMEG00000007034	SNRPN	98	99.582	ENSPPYG00000006269	SNURF	99	99.582	Pongo_abelii
ENSAMEG00000007034	SNRPN	98	99.582	ENSPCOG00000014231	SNRPN	99	99.582	Propithecus_coquereli
ENSAMEG00000007034	SNRPN	98	99.582	ENSRNOG00000059764	Snrpn	99	99.582	Rattus_norvegicus
ENSAMEG00000007034	SNRPN	98	99.583	ENSRBIG00000041765	SNRPN	99	99.582	Rhinopithecus_bieti
ENSAMEG00000007034	SNRPN	98	99.583	ENSRROG00000035157	SNRPN	99	99.582	Rhinopithecus_roxellana
ENSAMEG00000007034	SNRPN	98	99.582	ENSSBOG00000000110	-	99	99.582	Saimiri_boliviensis_boliviensis
ENSAMEG00000007034	SNRPN	98	98.745	ENSSBOG00000024929	-	99	98.745	Saimiri_boliviensis_boliviensis
ENSAMEG00000007034	SNRPN	90	94.545	ENSSHAG00000010257	-	90	94.545	Sarcophilus_harrisii
ENSAMEG00000007034	SNRPN	98	78.243	ENSSARG00000000072	SNRPN	100	78.243	Sorex_araneus
ENSAMEG00000007034	SNRPN	98	99.582	ENSSSCG00000028124	SNRPN	100	99.569	Sus_scrofa
ENSAMEG00000007034	SNRPN	99	97.934	ENSTTRG00000010966	SNRPN	89	97.934	Tursiops_truncatus
ENSAMEG00000007034	SNRPN	91	100.000	ENSUAMG00000016284	SNRPN	78	100.000	Ursus_americanus
ENSAMEG00000007034	SNRPN	98	100.000	ENSUMAG00000025589	SNRPN	99	100.000	Ursus_maritimus
ENSAMEG00000007034	SNRPN	93	100.000	ENSVVUG00000017971	SNRPN	93	100.000	Vulpes_vulpes