EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000007074 (Gene tree)
Gene ID: 100477881
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 16987 bases
Position: chrGL192437.1:635643-652629
Accession: 100477881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000007446	zf-C2H2	PF00096.26	1.6e-26	1	5
ENSAMEP00000007446	zf-C2H2	PF00096.26	1.6e-26	2	5
ENSAMEP00000007446	zf-C2H2	PF00096.26	1.6e-26	3	5
ENSAMEP00000007446	zf-C2H2	PF00096.26	1.6e-26	4	5
ENSAMEP00000007446	zf-C2H2	PF00096.26	1.6e-26	5	5
ENSAMEP00000007446	zf-met	PF12874.7	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000007759	PATZ1-201	2064	-	ENSAMEP00000007446	687 (aa)	XP_002915596	D2H203

Gene Model

Click here to download ENSAMEG00000007074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000007074's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000007074	PATZ1	53	37.748	ENSAMEG00000003482	ZNF628	56	37.662
ENSAMEG00000007074	PATZ1	55	34.444	ENSAMEG00000014454	-	98	34.444
ENSAMEG00000007074	PATZ1	53	37.297	ENSAMEG00000006122	ZNF233	61	37.297
ENSAMEG00000007074	PATZ1	53	32.558	ENSAMEG00000012484	ZBTB47	60	31.760
ENSAMEG00000007074	PATZ1	62	36.301	ENSAMEG00000016319	BCL6B	58	46.429
ENSAMEG00000007074	PATZ1	53	35.294	ENSAMEG00000001261	ZFP1	54	32.941
ENSAMEG00000007074	PATZ1	52	30.476	ENSAMEG00000017202	ZNF319	78	30.476
ENSAMEG00000007074	PATZ1	57	33.476	ENSAMEG00000007611	-	100	32.338
ENSAMEG00000007074	PATZ1	57	33.047	ENSAMEG00000012925	ZNF112	62	32.886
ENSAMEG00000007074	PATZ1	54	32.584	ENSAMEG00000016387	ZBTB24	56	32.584
ENSAMEG00000007074	PATZ1	73	36.232	ENSAMEG00000020014	ZBTB14	57	38.889
ENSAMEG00000007074	PATZ1	52	31.418	ENSAMEG00000007308	ZNF668	97	31.418
ENSAMEG00000007074	PATZ1	53	31.727	ENSAMEG00000012006	-	84	31.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000007074	PATZ1	100	99.127	ENSG00000100105	PATZ1	100	99.127	Homo_sapiens
ENSAMEG00000007074	PATZ1	100	53.591	ENSAPOG00000018447	patz1	100	59.483	Acanthochromis_polyacanthus
ENSAMEG00000007074	PATZ1	100	58.807	ENSACIG00000016779	patz1	100	58.807	Amphilophus_citrinellus
ENSAMEG00000007074	PATZ1	100	57.563	ENSAPEG00000013354	patz1	100	57.902	Amphiprion_percula
ENSAMEG00000007074	PATZ1	100	60.954	ENSATEG00000011260	patz1	100	58.298	Anabas_testudineus
ENSAMEG00000007074	PATZ1	85	91.952	ENSAPLG00000003934	PATZ1	99	90.925	Anas_platyrhynchos
ENSAMEG00000007074	PATZ1	100	99.127	ENSANAG00000029603	PATZ1	100	99.127	Aotus_nancymaae
ENSAMEG00000007074	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.218	Astyanax_mexicanus
ENSAMEG00000007074	PATZ1	100	99.709	ENSBTAG00000005478	PATZ1	100	99.709	Bos_taurus
ENSAMEG00000007074	PATZ1	100	99.127	ENSCJAG00000010978	PATZ1	100	99.127	Callithrix_jacchus
ENSAMEG00000007074	PATZ1	100	99.854	ENSCAFG00000013087	PATZ1	100	99.854	Canis_familiaris
ENSAMEG00000007074	PATZ1	100	99.272	ENSCHIG00000020203	PATZ1	100	99.272	Capra_hircus
ENSAMEG00000007074	PATZ1	100	99.127	ENSTSYG00000033183	PATZ1	100	99.127	Carlito_syrichta
ENSAMEG00000007074	PATZ1	100	99.127	ENSCCAG00000028772	PATZ1	100	99.127	Cebus_capucinus
ENSAMEG00000007074	PATZ1	100	99.127	ENSCATG00000006101	PATZ1	100	99.127	Cercocebus_atys
ENSAMEG00000007074	PATZ1	100	89.275	ENSCPBG00000011277	PATZ1	100	88.841	Chrysemys_picta_bellii
ENSAMEG00000007074	PATZ1	100	99.127	ENSCANG00000024972	PATZ1	100	99.127	Colobus_angolensis_palliatus
ENSAMEG00000007074	PATZ1	100	96.943	ENSCGRG00001004071	Patz1	100	96.943	Cricetulus_griseus_chok1gshd
ENSAMEG00000007074	PATZ1	93	97.667	ENSCGRG00000004814	Patz1	100	97.667	Cricetulus_griseus_crigri
ENSAMEG00000007074	PATZ1	100	54.965	ENSCSEG00000001385	patz1	100	55.062	Cynoglossus_semilaevis
ENSAMEG00000007074	PATZ1	100	58.509	ENSCVAG00000007684	patz1	100	58.368	Cyprinodon_variegatus
ENSAMEG00000007074	PATZ1	97	55.714	ENSDARG00000076584	patz1	98	55.429	Danio_rerio
ENSAMEG00000007074	PATZ1	90	99.192	ENSDNOG00000003183	PATZ1	100	99.192	Dasypus_novemcinctus
ENSAMEG00000007074	PATZ1	100	99.563	ENSDORG00000023834	Patz1	100	99.563	Dipodomys_ordii
ENSAMEG00000007074	PATZ1	100	99.418	ENSECAG00000025030	PATZ1	100	99.418	Equus_caballus
ENSAMEG00000007074	PATZ1	100	60.481	ENSELUG00000002333	patz1	100	60.381	Esox_lucius
ENSAMEG00000007074	PATZ1	100	99.854	ENSFCAG00000030253	PATZ1	100	99.854	Felis_catus
ENSAMEG00000007074	PATZ1	86	92.034	ENSFALG00000007450	PATZ1	99	91.141	Ficedula_albicollis
ENSAMEG00000007074	PATZ1	96	94.872	ENSFDAG00000005614	PATZ1	100	92.943	Fukomys_damarensis
ENSAMEG00000007074	PATZ1	100	57.003	ENSFHEG00000014755	patz1	100	56.923	Fundulus_heteroclitus
ENSAMEG00000007074	PATZ1	98	55.230	ENSGMOG00000001062	patz1	98	54.709	Gadus_morhua
ENSAMEG00000007074	PATZ1	100	88.921	ENSGALG00000006934	PATZ1	100	88.058	Gallus_gallus
ENSAMEG00000007074	PATZ1	100	54.219	ENSGAFG00000010053	patz1	100	54.420	Gambusia_affinis
ENSAMEG00000007074	PATZ1	85	92.110	ENSGAGG00000003214	PATZ1	100	91.081	Gopherus_agassizii
ENSAMEG00000007074	PATZ1	100	99.272	ENSGGOG00000017171	PATZ1	100	99.272	Gorilla_gorilla
ENSAMEG00000007074	PATZ1	100	54.596	ENSHCOG00000017644	patz1	93	54.735	Hippocampus_comes
ENSAMEG00000007074	PATZ1	97	54.184	ENSIPUG00000017653	patz1	97	59.889	Ictalurus_punctatus
ENSAMEG00000007074	PATZ1	100	99.418	ENSSTOG00000020707	PATZ1	100	99.418	Ictidomys_tridecemlineatus
ENSAMEG00000007074	PATZ1	100	96.807	ENSJJAG00000015259	Patz1	100	96.807	Jaculus_jaculus
ENSAMEG00000007074	PATZ1	100	57.670	ENSKMAG00000008157	patz1	100	57.687	Kryptolebias_marmoratus
ENSAMEG00000007074	PATZ1	100	98.836	ENSLAFG00000002317	PATZ1	100	98.836	Loxodonta_africana
ENSAMEG00000007074	PATZ1	100	98.981	ENSMFAG00000040968	PATZ1	100	98.981	Macaca_fascicularis
ENSAMEG00000007074	PATZ1	100	98.981	ENSMNEG00000037588	PATZ1	100	98.981	Macaca_nemestrina
ENSAMEG00000007074	PATZ1	100	99.127	ENSMLEG00000030938	PATZ1	100	99.127	Mandrillus_leucophaeus
ENSAMEG00000007074	PATZ1	100	57.007	ENSMAMG00000023652	patz1	100	57.143	Mastacembelus_armatus
ENSAMEG00000007074	PATZ1	85	88.205	ENSMGAG00000008439	PATZ1	100	87.179	Meleagris_gallopavo
ENSAMEG00000007074	PATZ1	100	98.690	ENSMAUG00000004129	Patz1	100	98.690	Mesocricetus_auratus
ENSAMEG00000007074	PATZ1	100	99.127	ENSMICG00000005430	PATZ1	100	99.127	Microcebus_murinus
ENSAMEG00000007074	PATZ1	100	98.544	ENSMOCG00000014488	Patz1	100	98.544	Microtus_ochrogaster
ENSAMEG00000007074	PATZ1	81	54.690	ENSMMOG00000021679	patz1	100	54.770	Mola_mola
ENSAMEG00000007074	PATZ1	100	57.143	ENSMALG00000021172	patz1	100	56.921	Monopterus_albus
ENSAMEG00000007074	PATZ1	100	98.544	MGP_CAROLIEiJ_G0016007	Patz1	100	98.544	Mus_caroli
ENSAMEG00000007074	PATZ1	100	98.690	ENSMUSG00000020453	Patz1	100	98.690	Mus_musculus
ENSAMEG00000007074	PATZ1	100	98.690	MGP_PahariEiJ_G0016884	Patz1	100	98.690	Mus_pahari
ENSAMEG00000007074	PATZ1	100	98.690	MGP_SPRETEiJ_G0016846	Patz1	100	98.690	Mus_spretus
ENSAMEG00000007074	PATZ1	100	99.563	ENSMLUG00000009942	PATZ1	100	99.563	Myotis_lucifugus
ENSAMEG00000007074	PATZ1	100	98.981	ENSNGAG00000010268	Patz1	100	98.981	Nannospalax_galili
ENSAMEG00000007074	PATZ1	100	58.708	ENSNBRG00000016032	patz1	100	58.708	Neolamprologus_brichardi
ENSAMEG00000007074	PATZ1	68	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSAMEG00000007074	PATZ1	100	98.690	ENSODEG00000003589	PATZ1	100	98.690	Octodon_degus
ENSAMEG00000007074	PATZ1	100	55.234	ENSONIG00000004248	patz1	100	55.234	Oreochromis_niloticus
ENSAMEG00000007074	PATZ1	100	93.614	ENSOANG00000014654	PATZ1	100	93.904	Ornithorhynchus_anatinus
ENSAMEG00000007074	PATZ1	100	56.599	ENSORLG00020010937	patz1	100	56.658	Oryzias_latipes_hni
ENSAMEG00000007074	PATZ1	100	56.676	ENSORLG00015007396	patz1	100	56.735	Oryzias_latipes_hsok
ENSAMEG00000007074	PATZ1	100	54.103	ENSOMEG00000006636	patz1	100	54.028	Oryzias_melastigma
ENSAMEG00000007074	PATZ1	100	99.272	ENSOGAG00000027905	PATZ1	100	99.272	Otolemur_garnettii
ENSAMEG00000007074	PATZ1	100	99.272	ENSPPAG00000033227	PATZ1	100	99.272	Pan_paniscus
ENSAMEG00000007074	PATZ1	100	99.854	ENSPPRG00000001573	PATZ1	100	99.854	Panthera_pardus
ENSAMEG00000007074	PATZ1	86	100.000	ENSPTIG00000007937	PATZ1	91	100.000	Panthera_tigris_altaica
ENSAMEG00000007074	PATZ1	100	99.272	ENSPTRG00000014268	PATZ1	100	99.272	Pan_troglodytes
ENSAMEG00000007074	PATZ1	100	99.127	ENSPANG00000006821	PATZ1	100	99.127	Papio_anubis
ENSAMEG00000007074	PATZ1	100	61.938	ENSPKIG00000019584	patz1	100	61.798	Paramormyrops_kingsleyae
ENSAMEG00000007074	PATZ1	60	83.535	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSAMEG00000007074	PATZ1	58	95.960	ENSPSIG00000011562	-	100	95.960	Pelodiscus_sinensis
ENSAMEG00000007074	PATZ1	100	56.882	ENSPMGG00000010196	patz1	100	57.022	Periophthalmus_magnuspinnatus
ENSAMEG00000007074	PATZ1	100	98.544	ENSPEMG00000005321	Patz1	100	98.544	Peromyscus_maniculatus_bairdii
ENSAMEG00000007074	PATZ1	100	54.006	ENSPLAG00000010425	patz1	100	57.072	Poecilia_latipinna
ENSAMEG00000007074	PATZ1	100	54.080	ENSPMEG00000000255	patz1	100	54.282	Poecilia_mexicana
ENSAMEG00000007074	PATZ1	100	56.906	ENSPREG00000002440	patz1	100	57.103	Poecilia_reticulata
ENSAMEG00000007074	PATZ1	100	99.127	ENSPPYG00000011732	PATZ1	100	99.127	Pongo_abelii
ENSAMEG00000007074	PATZ1	100	98.981	ENSPCOG00000019729	PATZ1	100	98.981	Propithecus_coquereli
ENSAMEG00000007074	PATZ1	100	99.709	ENSPVAG00000001749	PATZ1	100	99.709	Pteropus_vampyrus
ENSAMEG00000007074	PATZ1	100	59.244	ENSPNYG00000013542	patz1	100	59.244	Pundamilia_nyererei
ENSAMEG00000007074	PATZ1	84	60.292	ENSPNAG00000017222	patz1	99	58.599	Pygocentrus_nattereri
ENSAMEG00000007074	PATZ1	100	99.127	ENSRBIG00000044231	PATZ1	100	99.127	Rhinopithecus_bieti
ENSAMEG00000007074	PATZ1	100	99.127	ENSRROG00000037155	PATZ1	100	99.127	Rhinopithecus_roxellana
ENSAMEG00000007074	PATZ1	100	99.127	ENSSBOG00000003894	PATZ1	100	99.127	Saimiri_boliviensis_boliviensis
ENSAMEG00000007074	PATZ1	73	80.788	ENSSFOG00015013244	patz1	78	80.788	Scleropages_formosus
ENSAMEG00000007074	PATZ1	100	87.055	ENSSPUG00000015298	PATZ1	100	86.202	Sphenodon_punctatus
ENSAMEG00000007074	PATZ1	85	99.485	ENSSSCG00000010027	PATZ1	100	99.485	Sus_scrofa
ENSAMEG00000007074	PATZ1	100	58.069	ENSTRUG00000015366	patz1	100	57.931	Takifugu_rubripes
ENSAMEG00000007074	PATZ1	100	99.709	ENSTTRG00000010279	PATZ1	100	99.709	Tursiops_truncatus
ENSAMEG00000007074	PATZ1	100	93.159	ENSUAMG00000015014	PATZ1	100	93.159	Ursus_americanus
ENSAMEG00000007074	PATZ1	100	73.188	ENSXETG00000004190	patz1	100	73.082	Xenopus_tropicalis
ENSAMEG00000007074	PATZ1	100	54.357	ENSXMAG00000015531	patz1	100	54.558	Xiphophorus_maculatus