EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000007187 (Gene tree)
Gene ID: 100480328
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 52661 bases
Position: chrGL192539.1:1454211-1506871
Accession: 100480328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000007619	Suf	PF05843.14	1.3e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000007939	CSTF3-201	2163	XM_011222754	ENSAMEP00000007619	720 (aa)	XP_011221056	G1LKZ9

Gene Model

Click here to download ENSAMEG00000007187's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000007187's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000007187	CSTF3	98	99.859	ENSG00000176102	CSTF3	99	99.859	Homo_sapiens
ENSAMEG00000007187	CSTF3	98	91.808	ENSAPOG00000014054	cstf3	99	91.808	Acanthochromis_polyacanthus
ENSAMEG00000007187	CSTF3	87	85.920	ENSACIG00000005539	cstf3	100	85.920	Amphilophus_citrinellus
ENSAMEG00000007187	CSTF3	98	91.525	ENSAOCG00000010930	cstf3	99	91.525	Amphiprion_ocellaris
ENSAMEG00000007187	CSTF3	98	91.525	ENSAPEG00000007903	cstf3	99	91.525	Amphiprion_percula
ENSAMEG00000007187	CSTF3	98	91.808	ENSATEG00000000190	cstf3	99	91.808	Anabas_testudineus
ENSAMEG00000007187	CSTF3	98	98.164	ENSAPLG00000007217	CSTF3	100	98.164	Anas_platyrhynchos
ENSAMEG00000007187	CSTF3	98	96.192	ENSACAG00000002823	CSTF3	99	96.192	Anolis_carolinensis
ENSAMEG00000007187	CSTF3	98	99.859	ENSANAG00000020699	CSTF3	100	99.840	Aotus_nancymaae
ENSAMEG00000007187	CSTF3	98	91.631	ENSACLG00000007820	cstf3	99	91.667	Astatotilapia_calliptera
ENSAMEG00000007187	CSTF3	98	91.127	ENSAMXG00000014198	cstf3	99	91.408	Astyanax_mexicanus
ENSAMEG00000007187	CSTF3	98	99.859	ENSBTAG00000008617	CSTF3	100	99.852	Bos_taurus
ENSAMEG00000007187	CSTF3	97	49.452	WBGene00006307	suf-1	99	49.452	Caenorhabditis_elegans
ENSAMEG00000007187	CSTF3	98	99.859	ENSCJAG00000005533	CSTF3	100	99.840	Callithrix_jacchus
ENSAMEG00000007187	CSTF3	98	99.859	ENSCAFG00000007264	CSTF3	99	99.859	Canis_familiaris
ENSAMEG00000007187	CSTF3	99	99.722	ENSCAFG00020002715	CSTF3	100	99.722	Canis_lupus_dingo
ENSAMEG00000007187	CSTF3	98	98.293	ENSCHIG00000016418	CSTF3	100	99.840	Capra_hircus
ENSAMEG00000007187	CSTF3	98	99.436	ENSTSYG00000000451	CSTF3	100	99.436	Carlito_syrichta
ENSAMEG00000007187	CSTF3	83	96.023	ENSCAPG00000010958	CSTF3	98	96.023	Cavia_aperea
ENSAMEG00000007187	CSTF3	98	99.577	ENSCPOG00000005545	CSTF3	99	99.577	Cavia_porcellus
ENSAMEG00000007187	CSTF3	98	99.859	ENSCCAG00000024790	CSTF3	100	99.840	Cebus_capucinus
ENSAMEG00000007187	CSTF3	98	99.859	ENSCATG00000007080	CSTF3	100	99.840	Cercocebus_atys
ENSAMEG00000007187	CSTF3	98	99.859	ENSCLAG00000016179	CSTF3	99	99.859	Chinchilla_lanigera
ENSAMEG00000007187	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSAMEG00000007187	CSTF3	98	98.025	ENSCPBG00000006753	CSTF3	99	98.025	Chrysemys_picta_bellii
ENSAMEG00000007187	CSTF3	98	62.098	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSAMEG00000007187	CSTF3	98	61.785	ENSCSAVG00000004851	-	100	61.785	Ciona_savignyi
ENSAMEG00000007187	CSTF3	98	99.859	ENSCANG00000035468	CSTF3	100	99.840	Colobus_angolensis_palliatus
ENSAMEG00000007187	CSTF3	99	98.741	ENSCGRG00001014773	Cstf3	99	99.436	Cricetulus_griseus_chok1gshd
ENSAMEG00000007187	CSTF3	99	98.741	ENSCGRG00000004142	Cstf3	99	99.436	Cricetulus_griseus_crigri
ENSAMEG00000007187	CSTF3	98	91.537	ENSCSEG00000014283	cstf3	99	91.537	Cynoglossus_semilaevis
ENSAMEG00000007187	CSTF3	98	90.678	ENSCVAG00000019739	cstf3	99	90.678	Cyprinodon_variegatus
ENSAMEG00000007187	CSTF3	98	91.537	ENSDARG00000018904	cstf3	99	91.537	Danio_rerio
ENSAMEG00000007187	CSTF3	99	99.157	ENSDNOG00000007366	CSTF3	99	99.157	Dasypus_novemcinctus
ENSAMEG00000007187	CSTF3	98	91.961	ENSDORG00000005898	Cstf3	99	91.961	Dipodomys_ordii
ENSAMEG00000007187	CSTF3	98	57.418	FBgn0003559	su(f)	98	57.418	Drosophila_melanogaster
ENSAMEG00000007187	CSTF3	89	94.081	ENSETEG00000017097	CSTF3	90	94.081	Echinops_telfairi
ENSAMEG00000007187	CSTF3	84	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSAMEG00000007187	CSTF3	97	99.714	ENSEASG00005019884	CSTF3	100	99.714	Equus_asinus_asinus
ENSAMEG00000007187	CSTF3	97	99.714	ENSECAG00000023338	CSTF3	100	99.714	Equus_caballus
ENSAMEG00000007187	CSTF3	98	94.358	ENSEEUG00000015167	CSTF3	99	94.358	Erinaceus_europaeus
ENSAMEG00000007187	CSTF3	98	90.268	ENSELUG00000023393	cstf3	99	90.268	Esox_lucius
ENSAMEG00000007187	CSTF3	98	99.718	ENSFCAG00000030711	CSTF3	99	99.718	Felis_catus
ENSAMEG00000007187	CSTF3	93	98.649	ENSFALG00000010764	CSTF3	100	97.081	Ficedula_albicollis
ENSAMEG00000007187	CSTF3	98	99.718	ENSFDAG00000012082	CSTF3	99	99.718	Fukomys_damarensis
ENSAMEG00000007187	CSTF3	98	90.819	ENSFHEG00000020623	cstf3	99	90.819	Fundulus_heteroclitus
ENSAMEG00000007187	CSTF3	98	89.845	ENSGMOG00000012275	cstf3	99	89.845	Gadus_morhua
ENSAMEG00000007187	CSTF3	98	98.590	ENSGALG00000011685	CSTF3	99	98.590	Gallus_gallus
ENSAMEG00000007187	CSTF3	98	91.102	ENSGAFG00000002181	cstf3	99	91.102	Gambusia_affinis
ENSAMEG00000007187	CSTF3	98	91.102	ENSGACG00000015997	cstf3	99	91.102	Gasterosteus_aculeatus
ENSAMEG00000007187	CSTF3	98	98.025	ENSGAGG00000006200	CSTF3	99	98.025	Gopherus_agassizii
ENSAMEG00000007187	CSTF3	99	93.812	ENSGGOG00000026591	CSTF3	99	93.812	Gorilla_gorilla
ENSAMEG00000007187	CSTF3	98	91.631	ENSHBUG00000016656	cstf3	99	91.667	Haplochromis_burtoni
ENSAMEG00000007187	CSTF3	98	99.577	ENSHGLG00000017834	CSTF3	99	99.577	Heterocephalus_glaber_female
ENSAMEG00000007187	CSTF3	99	99.299	ENSHGLG00100018042	CSTF3	100	99.299	Heterocephalus_glaber_male
ENSAMEG00000007187	CSTF3	98	89.235	ENSHCOG00000015218	cstf3	99	89.266	Hippocampus_comes
ENSAMEG00000007187	CSTF3	98	90.691	ENSIPUG00000013170	CSTF3	99	90.691	Ictalurus_punctatus
ENSAMEG00000007187	CSTF3	98	99.859	ENSSTOG00000013306	CSTF3	99	99.859	Ictidomys_tridecemlineatus
ENSAMEG00000007187	CSTF3	99	87.552	ENSJJAG00000018430	Cstf3	99	87.552	Jaculus_jaculus
ENSAMEG00000007187	CSTF3	98	90.678	ENSKMAG00000010916	cstf3	99	90.678	Kryptolebias_marmoratus
ENSAMEG00000007187	CSTF3	98	90.678	ENSLBEG00000002306	cstf3	99	90.678	Labrus_bergylta
ENSAMEG00000007187	CSTF3	99	94.101	ENSLACG00000017296	CSTF3	99	94.499	Latimeria_chalumnae
ENSAMEG00000007187	CSTF3	98	93.794	ENSLOCG00000004415	cstf3	99	93.794	Lepisosteus_oculatus
ENSAMEG00000007187	CSTF3	98	99.577	ENSLAFG00000008712	CSTF3	99	99.577	Loxodonta_africana
ENSAMEG00000007187	CSTF3	98	99.859	ENSMFAG00000029516	CSTF3	100	99.840	Macaca_fascicularis
ENSAMEG00000007187	CSTF3	98	99.859	ENSMMUG00000002542	CSTF3	99	99.859	Macaca_mulatta
ENSAMEG00000007187	CSTF3	98	99.859	ENSMNEG00000021807	CSTF3	100	99.840	Macaca_nemestrina
ENSAMEG00000007187	CSTF3	98	99.859	ENSMLEG00000039594	CSTF3	100	99.840	Mandrillus_leucophaeus
ENSAMEG00000007187	CSTF3	98	91.525	ENSMAMG00000020423	cstf3	99	91.525	Mastacembelus_armatus
ENSAMEG00000007187	CSTF3	98	91.631	ENSMZEG00005012082	cstf3	99	91.667	Maylandia_zebra
ENSAMEG00000007187	CSTF3	98	98.590	ENSMGAG00000001383	CSTF3	99	98.590	Meleagris_gallopavo
ENSAMEG00000007187	CSTF3	98	99.295	ENSMAUG00000002487	Cstf3	99	99.295	Mesocricetus_auratus
ENSAMEG00000007187	CSTF3	98	99.859	ENSMICG00000004784	CSTF3	100	99.840	Microcebus_murinus
ENSAMEG00000007187	CSTF3	98	99.436	ENSMOCG00000017583	Cstf3	99	99.436	Microtus_ochrogaster
ENSAMEG00000007187	CSTF3	99	90.858	ENSMMOG00000016026	cstf3	95	90.858	Mola_mola
ENSAMEG00000007187	CSTF3	98	84.583	ENSMODG00000025205	-	99	84.583	Monodelphis_domestica
ENSAMEG00000007187	CSTF3	98	98.731	ENSMODG00000009745	-	99	98.731	Monodelphis_domestica
ENSAMEG00000007187	CSTF3	98	91.243	ENSMALG00000012050	cstf3	99	91.243	Monopterus_albus
ENSAMEG00000007187	CSTF3	98	99.436	MGP_CAROLIEiJ_G0024026	Cstf3	99	99.436	Mus_caroli
ENSAMEG00000007187	CSTF3	98	99.436	ENSMUSG00000027176	Cstf3	99	99.436	Mus_musculus
ENSAMEG00000007187	CSTF3	98	99.436	MGP_PahariEiJ_G0025464	Cstf3	99	99.436	Mus_pahari
ENSAMEG00000007187	CSTF3	98	99.436	MGP_SPRETEiJ_G0024939	Cstf3	99	99.436	Mus_spretus
ENSAMEG00000007187	CSTF3	98	100.000	ENSMPUG00000011457	CSTF3	99	100.000	Mustela_putorius_furo
ENSAMEG00000007187	CSTF3	99	99.163	ENSMLUG00000003073	-	99	99.163	Myotis_lucifugus
ENSAMEG00000007187	CSTF3	99	96.348	ENSMLUG00000026022	-	99	96.348	Myotis_lucifugus
ENSAMEG00000007187	CSTF3	98	99.436	ENSNGAG00000010677	Cstf3	99	99.436	Nannospalax_galili
ENSAMEG00000007187	CSTF3	87	90.880	ENSNBRG00000007345	cstf3	100	90.880	Neolamprologus_brichardi
ENSAMEG00000007187	CSTF3	98	99.859	ENSNLEG00000017901	CSTF3	100	99.840	Nomascus_leucogenys
ENSAMEG00000007187	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSAMEG00000007187	CSTF3	66	100.000	ENSOPRG00000000199	-	66	100.000	Ochotona_princeps
ENSAMEG00000007187	CSTF3	88	87.107	ENSODEG00000006311	-	97	87.107	Octodon_degus
ENSAMEG00000007187	CSTF3	98	99.718	ENSODEG00000016737	-	99	99.718	Octodon_degus
ENSAMEG00000007187	CSTF3	98	91.631	ENSONIG00000005563	cstf3	99	91.667	Oreochromis_niloticus
ENSAMEG00000007187	CSTF3	90	96.923	ENSOANG00000015140	CSTF3	100	96.923	Ornithorhynchus_anatinus
ENSAMEG00000007187	CSTF3	98	99.859	ENSOCUG00000015417	CSTF3	99	99.859	Oryctolagus_cuniculus
ENSAMEG00000007187	CSTF3	98	90.973	ENSORLG00000009762	cstf3	99	90.973	Oryzias_latipes
ENSAMEG00000007187	CSTF3	98	90.973	ENSORLG00020005540	cstf3	99	90.973	Oryzias_latipes_hni
ENSAMEG00000007187	CSTF3	98	90.832	ENSORLG00015003551	cstf3	99	90.832	Oryzias_latipes_hsok
ENSAMEG00000007187	CSTF3	98	90.665	ENSOMEG00000003848	cstf3	99	90.665	Oryzias_melastigma
ENSAMEG00000007187	CSTF3	98	99.579	ENSOGAG00000010229	CSTF3	99	99.579	Otolemur_garnettii
ENSAMEG00000007187	CSTF3	89	99.689	ENSOARG00000017271	CSTF3	99	99.689	Ovis_aries
ENSAMEG00000007187	CSTF3	99	96.062	ENSPPAG00000027358	CSTF3	99	96.062	Pan_paniscus
ENSAMEG00000007187	CSTF3	98	99.718	ENSPPRG00000016852	CSTF3	99	99.718	Panthera_pardus
ENSAMEG00000007187	CSTF3	98	99.718	ENSPTIG00000008716	CSTF3	99	99.718	Panthera_tigris_altaica
ENSAMEG00000007187	CSTF3	98	99.859	ENSPTRG00000003485	CSTF3	99	99.859	Pan_troglodytes
ENSAMEG00000007187	CSTF3	98	99.859	ENSPANG00000013722	CSTF3	99	99.859	Papio_anubis
ENSAMEG00000007187	CSTF3	99	92.556	ENSPKIG00000023648	cstf3	99	92.556	Paramormyrops_kingsleyae
ENSAMEG00000007187	CSTF3	98	97.602	ENSPSIG00000009173	CSTF3	99	97.602	Pelodiscus_sinensis
ENSAMEG00000007187	CSTF3	75	95.733	ENSPMGG00000000164	cstf3	98	95.733	Periophthalmus_magnuspinnatus
ENSAMEG00000007187	CSTF3	98	99.295	ENSPEMG00000011481	Cstf3	99	99.295	Peromyscus_maniculatus_bairdii
ENSAMEG00000007187	CSTF3	99	79.777	ENSPMAG00000007282	cstf3	99	79.747	Petromyzon_marinus
ENSAMEG00000007187	CSTF3	98	81.549	ENSPCIG00000030419	-	89	81.972	Phascolarctos_cinereus
ENSAMEG00000007187	CSTF3	100	94.730	ENSPCIG00000026406	-	100	98.080	Phascolarctos_cinereus
ENSAMEG00000007187	CSTF3	98	91.243	ENSPFOG00000017239	cstf3	99	91.243	Poecilia_formosa
ENSAMEG00000007187	CSTF3	98	91.243	ENSPLAG00000009456	cstf3	99	91.243	Poecilia_latipinna
ENSAMEG00000007187	CSTF3	98	91.243	ENSPMEG00000010320	cstf3	99	91.243	Poecilia_mexicana
ENSAMEG00000007187	CSTF3	98	91.243	ENSPREG00000013549	cstf3	99	91.243	Poecilia_reticulata
ENSAMEG00000007187	CSTF3	98	99.859	ENSPPYG00000003375	CSTF3	99	99.859	Pongo_abelii
ENSAMEG00000007187	CSTF3	69	100.000	ENSPCAG00000008025	-	70	100.000	Procavia_capensis
ENSAMEG00000007187	CSTF3	98	94.640	ENSPCOG00000014417	CSTF3	99	94.640	Propithecus_coquereli
ENSAMEG00000007187	CSTF3	98	94.358	ENSPVAG00000002350	CSTF3	99	94.358	Pteropus_vampyrus
ENSAMEG00000007187	CSTF3	98	91.631	ENSPNYG00000018259	cstf3	99	91.667	Pundamilia_nyererei
ENSAMEG00000007187	CSTF3	98	92.525	ENSPNAG00000020182	cstf3	99	92.525	Pygocentrus_nattereri
ENSAMEG00000007187	CSTF3	87	99.040	ENSRNOG00000012089	Cstf3	100	99.040	Rattus_norvegicus
ENSAMEG00000007187	CSTF3	99	98.312	ENSRBIG00000044258	CSTF3	100	99.840	Rhinopithecus_bieti
ENSAMEG00000007187	CSTF3	98	99.859	ENSRROG00000043450	CSTF3	100	99.840	Rhinopithecus_roxellana
ENSAMEG00000007187	CSTF3	98	99.859	ENSSBOG00000024764	CSTF3	100	99.840	Saimiri_boliviensis_boliviensis
ENSAMEG00000007187	CSTF3	99	98.174	ENSSHAG00000018128	-	99	98.174	Sarcophilus_harrisii
ENSAMEG00000007187	CSTF3	98	85.997	ENSSHAG00000003135	-	98	85.997	Sarcophilus_harrisii
ENSAMEG00000007187	CSTF3	98	92.666	ENSSFOG00015022133	cstf3	99	92.666	Scleropages_formosus
ENSAMEG00000007187	CSTF3	98	90.819	ENSSMAG00000002197	cstf3	99	90.819	Scophthalmus_maximus
ENSAMEG00000007187	CSTF3	98	91.667	ENSSDUG00000020426	cstf3	99	91.667	Seriola_dumerili
ENSAMEG00000007187	CSTF3	98	91.667	ENSSLDG00000025649	cstf3	99	91.667	Seriola_lalandi_dorsalis
ENSAMEG00000007187	CSTF3	98	99.718	ENSSARG00000000391	CSTF3	99	99.718	Sorex_araneus
ENSAMEG00000007187	CSTF3	96	97.250	ENSSPUG00000010546	CSTF3	100	97.250	Sphenodon_punctatus
ENSAMEG00000007187	CSTF3	98	91.667	ENSSPAG00000004958	cstf3	99	91.667	Stegastes_partitus
ENSAMEG00000007187	CSTF3	99	99.438	ENSSSCG00000040954	CSTF3	99	99.438	Sus_scrofa
ENSAMEG00000007187	CSTF3	98	97.881	ENSTGUG00000005010	CSTF3	100	97.881	Taeniopygia_guttata
ENSAMEG00000007187	CSTF3	98	90.395	ENSTRUG00000004959	cstf3	99	90.395	Takifugu_rubripes
ENSAMEG00000007187	CSTF3	99	90.436	ENSTNIG00000013811	cstf3	99	90.436	Tetraodon_nigroviridis
ENSAMEG00000007187	CSTF3	89	96.262	ENSTBEG00000001544	CSTF3	90	96.262	Tupaia_belangeri
ENSAMEG00000007187	CSTF3	98	97.038	ENSTTRG00000016366	CSTF3	99	97.038	Tursiops_truncatus
ENSAMEG00000007187	CSTF3	99	99.722	ENSUMAG00000018971	CSTF3	100	99.840	Ursus_maritimus
ENSAMEG00000007187	CSTF3	98	99.718	ENSVPAG00000007800	CSTF3	99	99.718	Vicugna_pacos
ENSAMEG00000007187	CSTF3	99	99.722	ENSVVUG00000014938	CSTF3	100	99.840	Vulpes_vulpes
ENSAMEG00000007187	CSTF3	88	79.531	ENSXETG00000021399	cstf3	100	80.744	Xenopus_tropicalis
ENSAMEG00000007187	CSTF3	66	43.802	ENSXETG00000017946	-	99	43.802	Xenopus_tropicalis
ENSAMEG00000007187	CSTF3	87	90.240	ENSXCOG00000011741	cstf3	100	90.240	Xiphophorus_couchianus
ENSAMEG00000007187	CSTF3	98	91.243	ENSXMAG00000009545	cstf3	99	91.243	Xiphophorus_maculatus