EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000007194 (Gene tree)
Gene ID: 100481756
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 32045 bases
Position: chrGL192823.1:855721-887765
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000007583	MRP-S27	PF10037.9	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000007901	PTCD2-201	1167	-	ENSAMEP00000007583	388 (aa)	-	G1LKW3

Gene Model

Click here to download ENSAMEG00000007194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000007194's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000007194	PTCD2	99	78.182	ENSG00000049883	PTCD2	100	78.818	Homo_sapiens
ENSAMEG00000007194	PTCD2	94	45.628	ENSAPOG00000020682	ptcd2	95	45.628	Acanthochromis_polyacanthus
ENSAMEG00000007194	PTCD2	89	40.115	ENSACIG00000002053	ptcd2	100	40.115	Amphilophus_citrinellus
ENSAMEG00000007194	PTCD2	96	44.652	ENSAOCG00000006616	ptcd2	95	44.652	Amphiprion_ocellaris
ENSAMEG00000007194	PTCD2	94	44.959	ENSAPEG00000022926	ptcd2	93	44.959	Amphiprion_percula
ENSAMEG00000007194	PTCD2	96	56.720	ENSACAG00000009747	PTCD2	93	56.720	Anolis_carolinensis
ENSAMEG00000007194	PTCD2	99	79.481	ENSANAG00000029353	PTCD2	99	79.481	Aotus_nancymaae
ENSAMEG00000007194	PTCD2	90	45.845	ENSACLG00000027742	ptcd2	89	45.845	Astatotilapia_calliptera
ENSAMEG00000007194	PTCD2	83	45.820	ENSAMXG00000029404	ptcd2	86	45.820	Astyanax_mexicanus
ENSAMEG00000007194	PTCD2	99	80.469	ENSBTAG00000014675	PTCD2	100	80.469	Bos_taurus
ENSAMEG00000007194	PTCD2	99	78.961	ENSCJAG00000016364	PTCD2	99	78.961	Callithrix_jacchus
ENSAMEG00000007194	PTCD2	99	86.047	ENSCAFG00000007982	PTCD2	91	86.047	Canis_familiaris
ENSAMEG00000007194	PTCD2	89	88.439	ENSCAFG00020019147	PTCD2	97	88.439	Canis_lupus_dingo
ENSAMEG00000007194	PTCD2	99	81.510	ENSCHIG00000017118	PTCD2	100	81.510	Capra_hircus
ENSAMEG00000007194	PTCD2	99	70.757	ENSCPOG00000040168	PTCD2	100	70.757	Cavia_porcellus
ENSAMEG00000007194	PTCD2	80	75.161	ENSCCAG00000021996	-	95	75.000	Cebus_capucinus
ENSAMEG00000007194	PTCD2	99	78.442	ENSCCAG00000029389	-	99	78.442	Cebus_capucinus
ENSAMEG00000007194	PTCD2	99	76.501	ENSCATG00000019069	PTCD2	100	76.501	Cercocebus_atys
ENSAMEG00000007194	PTCD2	99	73.629	ENSCLAG00000000072	PTCD2	100	73.629	Chinchilla_lanigera
ENSAMEG00000007194	PTCD2	99	78.329	ENSCSAG00000015623	PTCD2	100	78.329	Chlorocebus_sabaeus
ENSAMEG00000007194	PTCD2	89	58.908	ENSCHOG00000010634	PTCD2	100	58.908	Choloepus_hoffmanni
ENSAMEG00000007194	PTCD2	99	55.013	ENSCPBG00000000216	PTCD2	99	55.013	Chrysemys_picta_bellii
ENSAMEG00000007194	PTCD2	100	76.031	ENSCANG00000035636	PTCD2	100	76.031	Colobus_angolensis_palliatus
ENSAMEG00000007194	PTCD2	99	71.948	ENSCGRG00001015289	Ptcd2	84	71.948	Cricetulus_griseus_chok1gshd
ENSAMEG00000007194	PTCD2	99	71.948	ENSCGRG00000006193	Ptcd2	84	71.948	Cricetulus_griseus_crigri
ENSAMEG00000007194	PTCD2	90	43.678	ENSCVAG00000001285	ptcd2	89	43.678	Cyprinodon_variegatus
ENSAMEG00000007194	PTCD2	96	45.308	ENSDARG00000035391	ptcd2	97	45.308	Danio_rerio
ENSAMEG00000007194	PTCD2	99	77.807	ENSDNOG00000008719	PTCD2	100	77.807	Dasypus_novemcinctus
ENSAMEG00000007194	PTCD2	99	76.486	ENSDORG00000004921	Ptcd2	100	76.486	Dipodomys_ordii
ENSAMEG00000007194	PTCD2	99	69.588	ENSETEG00000016542	PTCD2	99	69.588	Echinops_telfairi
ENSAMEG00000007194	PTCD2	99	79.896	ENSEASG00005018038	PTCD2	100	79.896	Equus_asinus_asinus
ENSAMEG00000007194	PTCD2	100	79.124	ENSECAG00000007022	PTCD2	99	79.124	Equus_caballus
ENSAMEG00000007194	PTCD2	99	72.727	ENSEEUG00000014031	PTCD2	99	72.727	Erinaceus_europaeus
ENSAMEG00000007194	PTCD2	91	49.153	ENSELUG00000003584	ptcd2	92	49.153	Esox_lucius
ENSAMEG00000007194	PTCD2	100	78.351	ENSFCAG00000045432	PTCD2	84	78.351	Felis_catus
ENSAMEG00000007194	PTCD2	84	50.765	ENSFALG00000010299	PTCD2	99	50.765	Ficedula_albicollis
ENSAMEG00000007194	PTCD2	99	73.629	ENSFDAG00000018461	PTCD2	100	73.629	Fukomys_damarensis
ENSAMEG00000007194	PTCD2	90	49.003	ENSGMOG00000003637	ptcd2	91	49.003	Gadus_morhua
ENSAMEG00000007194	PTCD2	91	49.575	ENSGALG00000038260	PTCD2	93	49.575	Gallus_gallus
ENSAMEG00000007194	PTCD2	93	59.331	ENSGAGG00000021952	PTCD2	92	59.331	Gopherus_agassizii
ENSAMEG00000007194	PTCD2	99	78.182	ENSGGOG00000010695	PTCD2	99	78.182	Gorilla_gorilla
ENSAMEG00000007194	PTCD2	90	45.845	ENSHBUG00000009191	ptcd2	89	45.845	Haplochromis_burtoni
ENSAMEG00000007194	PTCD2	96	75.741	ENSHGLG00000001234	PTCD2	97	75.741	Heterocephalus_glaber_female
ENSAMEG00000007194	PTCD2	99	74.151	ENSHGLG00100015419	PTCD2	100	74.151	Heterocephalus_glaber_male
ENSAMEG00000007194	PTCD2	93	46.556	ENSHCOG00000001703	ptcd2	92	46.556	Hippocampus_comes
ENSAMEG00000007194	PTCD2	85	45.152	ENSIPUG00000006080	ptcd2	91	44.160	Ictalurus_punctatus
ENSAMEG00000007194	PTCD2	98	78.272	ENSSTOG00000006596	PTCD2	99	78.272	Ictidomys_tridecemlineatus
ENSAMEG00000007194	PTCD2	99	74.935	ENSJJAG00000024388	Ptcd2	100	74.935	Jaculus_jaculus
ENSAMEG00000007194	PTCD2	96	42.473	ENSKMAG00000009329	ptcd2	96	42.473	Kryptolebias_marmoratus
ENSAMEG00000007194	PTCD2	89	46.686	ENSLBEG00000024871	ptcd2	88	46.686	Labrus_bergylta
ENSAMEG00000007194	PTCD2	95	53.533	ENSLOCG00000011122	ptcd2	95	53.533	Lepisosteus_oculatus
ENSAMEG00000007194	PTCD2	80	79.743	ENSLAFG00000004115	PTCD2	100	79.743	Loxodonta_africana
ENSAMEG00000007194	PTCD2	100	75.773	ENSMFAG00000031516	PTCD2	100	75.773	Macaca_fascicularis
ENSAMEG00000007194	PTCD2	99	76.240	ENSMNEG00000007537	PTCD2	100	76.240	Macaca_nemestrina
ENSAMEG00000007194	PTCD2	100	76.031	ENSMLEG00000031093	PTCD2	100	76.031	Mandrillus_leucophaeus
ENSAMEG00000007194	PTCD2	90	46.839	ENSMAMG00000018529	ptcd2	91	46.839	Mastacembelus_armatus
ENSAMEG00000007194	PTCD2	90	45.845	ENSMZEG00005003625	ptcd2	89	45.845	Maylandia_zebra
ENSAMEG00000007194	PTCD2	90	50.000	ENSMGAG00000005033	PTCD2	100	50.000	Meleagris_gallopavo
ENSAMEG00000007194	PTCD2	99	57.180	ENSMAUG00000020253	Ptcd2	100	57.180	Mesocricetus_auratus
ENSAMEG00000007194	PTCD2	99	78.553	ENSMICG00000004535	PTCD2	99	78.553	Microcebus_murinus
ENSAMEG00000007194	PTCD2	99	72.846	ENSMOCG00000019985	Ptcd2	100	72.846	Microtus_ochrogaster
ENSAMEG00000007194	PTCD2	91	59.207	ENSMODG00000001695	PTCD2	92	59.207	Monodelphis_domestica
ENSAMEG00000007194	PTCD2	90	47.126	ENSMALG00000022372	ptcd2	91	47.126	Monopterus_albus
ENSAMEG00000007194	PTCD2	99	71.279	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.279	Mus_caroli
ENSAMEG00000007194	PTCD2	99	69.974	ENSMUSG00000021650	Ptcd2	100	69.974	Mus_musculus
ENSAMEG00000007194	PTCD2	99	73.368	MGP_PahariEiJ_G0015904	Ptcd2	100	73.368	Mus_pahari
ENSAMEG00000007194	PTCD2	99	70.757	MGP_SPRETEiJ_G0019711	Ptcd2	100	70.757	Mus_spretus
ENSAMEG00000007194	PTCD2	99	93.734	ENSMPUG00000014401	PTCD2	100	93.734	Mustela_putorius_furo
ENSAMEG00000007194	PTCD2	99	78.553	ENSMLUG00000007374	PTCD2	99	78.553	Myotis_lucifugus
ENSAMEG00000007194	PTCD2	99	72.846	ENSNGAG00000005027	Ptcd2	100	72.846	Nannospalax_galili
ENSAMEG00000007194	PTCD2	90	46.132	ENSNBRG00000008174	ptcd2	91	46.132	Neolamprologus_brichardi
ENSAMEG00000007194	PTCD2	85	45.619	ENSNBRG00000000092	-	100	45.619	Neolamprologus_brichardi
ENSAMEG00000007194	PTCD2	99	77.403	ENSNLEG00000004516	PTCD2	99	77.403	Nomascus_leucogenys
ENSAMEG00000007194	PTCD2	77	53.667	ENSMEUG00000014012	-	82	53.035	Notamacropus_eugenii
ENSAMEG00000007194	PTCD2	99	71.576	ENSOPRG00000007290	PTCD2	99	71.576	Ochotona_princeps
ENSAMEG00000007194	PTCD2	95	73.784	ENSODEG00000016417	PTCD2	97	73.784	Octodon_degus
ENSAMEG00000007194	PTCD2	85	44.713	ENSONIG00000011269	ptcd2	96	44.713	Oreochromis_niloticus
ENSAMEG00000007194	PTCD2	94	78.082	ENSOCUG00000007970	PTCD2	100	76.501	Oryctolagus_cuniculus
ENSAMEG00000007194	PTCD2	89	44.798	ENSORLG00000003851	ptcd2	88	44.798	Oryzias_latipes
ENSAMEG00000007194	PTCD2	89	44.220	ENSORLG00020009823	ptcd2	90	44.220	Oryzias_latipes_hni
ENSAMEG00000007194	PTCD2	89	44.509	ENSORLG00015016777	ptcd2	99	44.509	Oryzias_latipes_hsok
ENSAMEG00000007194	PTCD2	89	43.353	ENSOMEG00000012396	ptcd2	84	43.353	Oryzias_melastigma
ENSAMEG00000007194	PTCD2	99	75.844	ENSOGAG00000008390	PTCD2	99	75.844	Otolemur_garnettii
ENSAMEG00000007194	PTCD2	99	80.670	ENSOARG00000005087	PTCD2	99	80.670	Ovis_aries
ENSAMEG00000007194	PTCD2	99	78.182	ENSPPAG00000028480	PTCD2	99	78.182	Pan_paniscus
ENSAMEG00000007194	PTCD2	99	78.182	ENSPTRG00000016968	PTCD2	99	78.182	Pan_troglodytes
ENSAMEG00000007194	PTCD2	89	78.551	ENSPANG00000006611	PTCD2	89	78.551	Papio_anubis
ENSAMEG00000007194	PTCD2	91	47.740	ENSPKIG00000019896	ptcd2	92	47.740	Paramormyrops_kingsleyae
ENSAMEG00000007194	PTCD2	80	61.290	ENSPSIG00000014559	PTCD2	96	61.290	Pelodiscus_sinensis
ENSAMEG00000007194	PTCD2	99	71.169	ENSPEMG00000000884	Ptcd2	100	71.169	Peromyscus_maniculatus_bairdii
ENSAMEG00000007194	PTCD2	99	59.375	ENSPCIG00000029047	PTCD2	100	59.375	Phascolarctos_cinereus
ENSAMEG00000007194	PTCD2	84	44.648	ENSPLAG00000010456	ptcd2	91	44.413	Poecilia_latipinna
ENSAMEG00000007194	PTCD2	90	43.391	ENSPREG00000021797	ptcd2	88	43.391	Poecilia_reticulata
ENSAMEG00000007194	PTCD2	99	68.831	ENSPPYG00000015543	PTCD2	99	68.831	Pongo_abelii
ENSAMEG00000007194	PTCD2	80	66.559	ENSPCAG00000006806	PTCD2	99	66.559	Procavia_capensis
ENSAMEG00000007194	PTCD2	99	79.845	ENSPVAG00000010935	PTCD2	99	79.845	Pteropus_vampyrus
ENSAMEG00000007194	PTCD2	90	45.845	ENSPNYG00000003122	ptcd2	89	45.845	Pundamilia_nyererei
ENSAMEG00000007194	PTCD2	94	48.370	ENSPNAG00000021490	ptcd2	95	48.641	Pygocentrus_nattereri
ENSAMEG00000007194	PTCD2	99	73.107	ENSRNOG00000028403	Ptcd2	100	73.107	Rattus_norvegicus
ENSAMEG00000007194	PTCD2	100	72.165	ENSRBIG00000032929	PTCD2	100	72.165	Rhinopithecus_bieti
ENSAMEG00000007194	PTCD2	99	78.068	ENSRROG00000000080	PTCD2	100	78.068	Rhinopithecus_roxellana
ENSAMEG00000007194	PTCD2	99	77.807	ENSSBOG00000018911	PTCD2	100	77.807	Saimiri_boliviensis_boliviensis
ENSAMEG00000007194	PTCD2	96	59.786	ENSSHAG00000003833	PTCD2	96	59.786	Sarcophilus_harrisii
ENSAMEG00000007194	PTCD2	89	46.377	ENSSFOG00015015415	ptcd2	89	46.377	Scleropages_formosus
ENSAMEG00000007194	PTCD2	89	44.669	ENSSMAG00000010350	ptcd2	90	44.669	Scophthalmus_maximus
ENSAMEG00000007194	PTCD2	89	47.262	ENSSDUG00000008142	ptcd2	87	47.262	Seriola_dumerili
ENSAMEG00000007194	PTCD2	89	47.550	ENSSLDG00000015284	ptcd2	91	47.550	Seriola_lalandi_dorsalis
ENSAMEG00000007194	PTCD2	81	69.649	ENSSARG00000004983	PTCD2	100	69.649	Sorex_araneus
ENSAMEG00000007194	PTCD2	91	53.672	ENSSPUG00000000176	PTCD2	89	53.672	Sphenodon_punctatus
ENSAMEG00000007194	PTCD2	90	46.264	ENSSPAG00000008591	ptcd2	89	46.264	Stegastes_partitus
ENSAMEG00000007194	PTCD2	99	81.395	ENSSSCG00000016975	PTCD2	91	81.395	Sus_scrofa
ENSAMEG00000007194	PTCD2	89	50.581	ENSTGUG00000005705	PTCD2	99	50.581	Taeniopygia_guttata
ENSAMEG00000007194	PTCD2	100	76.289	ENSTBEG00000016559	PTCD2	100	76.289	Tupaia_belangeri
ENSAMEG00000007194	PTCD2	100	80.720	ENSTTRG00000011851	PTCD2	100	80.720	Tursiops_truncatus
ENSAMEG00000007194	PTCD2	100	97.938	ENSUAMG00000007583	PTCD2	91	97.938	Ursus_americanus
ENSAMEG00000007194	PTCD2	99	97.650	ENSUMAG00000007666	PTCD2	100	97.650	Ursus_maritimus
ENSAMEG00000007194	PTCD2	99	80.928	ENSVPAG00000009597	PTCD2	99	80.928	Vicugna_pacos
ENSAMEG00000007194	PTCD2	99	85.901	ENSVVUG00000007299	-	100	85.901	Vulpes_vulpes
ENSAMEG00000007194	PTCD2	93	52.222	ENSXETG00000031652	PTCD2	94	52.222	Xenopus_tropicalis
ENSAMEG00000007194	PTCD2	84	44.954	ENSXMAG00000005940	ptcd2	82	44.413	Xiphophorus_maculatus