EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000007461 (Gene tree)
Gene ID: 100475964
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 1690 bases
Position: chrGL192733.1:626111-627800
Accession: 100475964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000007853	PseudoU_synth_2	PF00849.22	4.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000008181	RPUSD1-201	909	-	ENSAMEP00000007853	302 (aa)	XP_002920217	D2HDX7

Gene Model

Click here to download ENSAMEG00000007461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000007461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000007461	RPUSD1	100	80.449	ENSG00000007376	RPUSD1	100	85.714	Homo_sapiens
ENSAMEG00000007461	RPUSD1	98	59.272	ENSAPOG00000022221	rpusd1	98	59.272	Acanthochromis_polyacanthus
ENSAMEG00000007461	RPUSD1	98	57.190	ENSACIG00000015863	rpusd1	98	57.843	Amphilophus_citrinellus
ENSAMEG00000007461	RPUSD1	98	57.705	ENSAOCG00000021975	rpusd1	95	57.377	Amphiprion_ocellaris
ENSAMEG00000007461	RPUSD1	98	58.033	ENSAPEG00000001316	rpusd1	95	57.705	Amphiprion_percula
ENSAMEG00000007461	RPUSD1	79	67.782	ENSATEG00000002984	rpusd1	98	57.377	Anabas_testudineus
ENSAMEG00000007461	RPUSD1	78	60.905	ENSAPLG00000012316	RPUSD1	99	60.905	Anas_platyrhynchos
ENSAMEG00000007461	RPUSD1	99	68.750	ENSACAG00000008953	RPUSD1	100	68.750	Anolis_carolinensis
ENSAMEG00000007461	RPUSD1	100	81.090	ENSANAG00000024709	RPUSD1	100	81.410	Aotus_nancymaae
ENSAMEG00000007461	RPUSD1	98	57.419	ENSACLG00000013692	rpusd1	98	58.958	Astatotilapia_calliptera
ENSAMEG00000007461	RPUSD1	99	61.204	ENSAMXG00000019802	rpusd1	100	61.204	Astyanax_mexicanus
ENSAMEG00000007461	RPUSD1	100	85.065	ENSBTAG00000000179	RPUSD1	100	85.714	Bos_taurus
ENSAMEG00000007461	RPUSD1	100	80.128	ENSCJAG00000012253	RPUSD1	100	80.449	Callithrix_jacchus
ENSAMEG00000007461	RPUSD1	100	94.371	ENSCAFG00000019614	RPUSD1	100	94.371	Canis_familiaris
ENSAMEG00000007461	RPUSD1	100	94.371	ENSCAFG00020008891	RPUSD1	100	94.371	Canis_lupus_dingo
ENSAMEG00000007461	RPUSD1	100	84.740	ENSCHIG00000012872	RPUSD1	100	85.390	Capra_hircus
ENSAMEG00000007461	RPUSD1	100	81.788	ENSTSYG00000036934	RPUSD1	100	81.788	Carlito_syrichta
ENSAMEG00000007461	RPUSD1	100	83.007	ENSCAPG00000014219	RPUSD1	100	83.007	Cavia_aperea
ENSAMEG00000007461	RPUSD1	100	83.007	ENSCPOG00000034604	RPUSD1	100	83.007	Cavia_porcellus
ENSAMEG00000007461	RPUSD1	100	81.410	ENSCCAG00000034385	RPUSD1	100	81.410	Cebus_capucinus
ENSAMEG00000007461	RPUSD1	100	80.769	ENSCATG00000042983	RPUSD1	100	81.410	Cercocebus_atys
ENSAMEG00000007461	RPUSD1	100	81.373	ENSCLAG00000013966	RPUSD1	100	81.699	Chinchilla_lanigera
ENSAMEG00000007461	RPUSD1	100	80.449	ENSCSAG00000012121	RPUSD1	100	80.449	Chlorocebus_sabaeus
ENSAMEG00000007461	RPUSD1	99	66.776	ENSCPBG00000021101	RPUSD1	99	66.776	Chrysemys_picta_bellii
ENSAMEG00000007461	RPUSD1	90	84.133	ENSCANG00000028576	RPUSD1	96	84.133	Colobus_angolensis_palliatus
ENSAMEG00000007461	RPUSD1	100	82.566	ENSCGRG00001014253	Rpusd1	100	82.566	Cricetulus_griseus_chok1gshd
ENSAMEG00000007461	RPUSD1	100	82.566	ENSCGRG00000017995	Rpusd1	100	82.566	Cricetulus_griseus_crigri
ENSAMEG00000007461	RPUSD1	99	57.285	ENSCSEG00000018512	rpusd1	100	57.285	Cynoglossus_semilaevis
ENSAMEG00000007461	RPUSD1	98	59.667	ENSCVAG00000022746	rpusd1	98	59.667	Cyprinodon_variegatus
ENSAMEG00000007461	RPUSD1	99	63.333	ENSDARG00000060192	rpusd1	100	63.333	Danio_rerio
ENSAMEG00000007461	RPUSD1	100	82.143	ENSDNOG00000003721	RPUSD1	100	82.143	Dasypus_novemcinctus
ENSAMEG00000007461	RPUSD1	100	84.488	ENSDORG00000026656	Rpusd1	100	86.139	Dipodomys_ordii
ENSAMEG00000007461	RPUSD1	97	46.278	ENSEBUG00000008767	rpusd1	93	46.278	Eptatretus_burgeri
ENSAMEG00000007461	RPUSD1	100	82.911	ENSEASG00005018421	RPUSD1	76	83.544	Equus_asinus_asinus
ENSAMEG00000007461	RPUSD1	84	60.236	ENSELUG00000014307	rpusd1	88	53.698	Esox_lucius
ENSAMEG00000007461	RPUSD1	100	91.060	ENSFCAG00000010359	RPUSD1	100	91.060	Felis_catus
ENSAMEG00000007461	RPUSD1	99	68.212	ENSFALG00000003211	RPUSD1	100	68.212	Ficedula_albicollis
ENSAMEG00000007461	RPUSD1	100	82.680	ENSFDAG00000013398	RPUSD1	100	82.680	Fukomys_damarensis
ENSAMEG00000007461	RPUSD1	98	58.746	ENSFHEG00000004736	rpusd1	98	58.416	Fundulus_heteroclitus
ENSAMEG00000007461	RPUSD1	84	62.846	ENSGMOG00000010756	rpusd1	99	56.026	Gadus_morhua
ENSAMEG00000007461	RPUSD1	99	67.532	ENSGALG00000005315	RPUSD1	100	67.532	Gallus_gallus
ENSAMEG00000007461	RPUSD1	98	59.333	ENSGAFG00000009886	rpusd1	98	59.333	Gambusia_affinis
ENSAMEG00000007461	RPUSD1	82	64.257	ENSGACG00000014276	rpusd1	97	56.811	Gasterosteus_aculeatus
ENSAMEG00000007461	RPUSD1	99	66.447	ENSGAGG00000004181	RPUSD1	99	66.447	Gopherus_agassizii
ENSAMEG00000007461	RPUSD1	100	80.128	ENSGGOG00000013997	RPUSD1	100	80.769	Gorilla_gorilla
ENSAMEG00000007461	RPUSD1	98	57.097	ENSHBUG00000023728	rpusd1	98	58.632	Haplochromis_burtoni
ENSAMEG00000007461	RPUSD1	100	82.353	ENSHGLG00000002595	RPUSD1	100	82.353	Heterocephalus_glaber_female
ENSAMEG00000007461	RPUSD1	100	82.353	ENSHGLG00100014303	RPUSD1	100	82.353	Heterocephalus_glaber_male
ENSAMEG00000007461	RPUSD1	98	57.576	ENSHCOG00000002390	rpusd1	99	57.576	Hippocampus_comes
ENSAMEG00000007461	RPUSD1	99	60.726	ENSIPUG00000001570	rpusd1	99	60.066	Ictalurus_punctatus
ENSAMEG00000007461	RPUSD1	100	83.007	ENSSTOG00000004276	RPUSD1	100	83.007	Ictidomys_tridecemlineatus
ENSAMEG00000007461	RPUSD1	100	83.224	ENSJJAG00000015696	Rpusd1	100	83.553	Jaculus_jaculus
ENSAMEG00000007461	RPUSD1	98	58.667	ENSKMAG00000017287	rpusd1	98	58.667	Kryptolebias_marmoratus
ENSAMEG00000007461	RPUSD1	98	55.987	ENSLBEG00000013354	RPUSD1	98	56.066	Labrus_bergylta
ENSAMEG00000007461	RPUSD1	98	55.987	ENSLBEG00000022502	rpusd1	98	56.066	Labrus_bergylta
ENSAMEG00000007461	RPUSD1	99	62.914	ENSLACG00000008869	RPUSD1	99	62.914	Latimeria_chalumnae
ENSAMEG00000007461	RPUSD1	72	74.074	ENSLOCG00000005682	rpusd1	99	74.074	Lepisosteus_oculatus
ENSAMEG00000007461	RPUSD1	100	83.113	ENSLAFG00000002115	RPUSD1	100	83.113	Loxodonta_africana
ENSAMEG00000007461	RPUSD1	100	80.769	ENSMFAG00000003961	RPUSD1	100	81.410	Macaca_fascicularis
ENSAMEG00000007461	RPUSD1	100	80.769	ENSMMUG00000000842	RPUSD1	100	81.410	Macaca_mulatta
ENSAMEG00000007461	RPUSD1	100	80.769	ENSMNEG00000042712	RPUSD1	100	81.410	Macaca_nemestrina
ENSAMEG00000007461	RPUSD1	100	80.769	ENSMLEG00000030591	RPUSD1	100	81.410	Mandrillus_leucophaeus
ENSAMEG00000007461	RPUSD1	98	58.824	ENSMAMG00000004735	rpusd1	98	58.824	Mastacembelus_armatus
ENSAMEG00000007461	RPUSD1	98	57.419	ENSMZEG00005003214	rpusd1	98	58.958	Maylandia_zebra
ENSAMEG00000007461	RPUSD1	97	67.110	ENSMGAG00000005447	RPUSD1	99	67.110	Meleagris_gallopavo
ENSAMEG00000007461	RPUSD1	87	78.195	ENSMAUG00000019998	Rpusd1	100	78.195	Mesocricetus_auratus
ENSAMEG00000007461	RPUSD1	100	82.410	ENSMICG00000017561	RPUSD1	100	83.062	Microcebus_murinus
ENSAMEG00000007461	RPUSD1	100	84.314	ENSMOCG00000014082	Rpusd1	100	84.967	Microtus_ochrogaster
ENSAMEG00000007461	RPUSD1	98	57.770	ENSMMOG00000012569	rpusd1	99	57.770	Mola_mola
ENSAMEG00000007461	RPUSD1	100	71.521	ENSMODG00000016882	RPUSD1	100	71.845	Monodelphis_domestica
ENSAMEG00000007461	RPUSD1	98	57.190	ENSMALG00000017818	rpusd1	98	58.170	Monopterus_albus
ENSAMEG00000007461	RPUSD1	100	84.641	MGP_CAROLIEiJ_G0021244	Rpusd1	100	84.641	Mus_caroli
ENSAMEG00000007461	RPUSD1	100	85.294	ENSMUSG00000041199	Rpusd1	100	85.294	Mus_musculus
ENSAMEG00000007461	RPUSD1	100	82.468	MGP_PahariEiJ_G0023562	Rpusd1	100	84.091	Mus_pahari
ENSAMEG00000007461	RPUSD1	100	85.294	MGP_SPRETEiJ_G0022155	Rpusd1	100	85.294	Mus_spretus
ENSAMEG00000007461	RPUSD1	100	91.722	ENSMPUG00000015897	RPUSD1	100	91.722	Mustela_putorius_furo
ENSAMEG00000007461	RPUSD1	100	82.692	ENSMLUG00000001089	RPUSD1	100	82.958	Myotis_lucifugus
ENSAMEG00000007461	RPUSD1	100	82.680	ENSNGAG00000003595	Rpusd1	100	83.333	Nannospalax_galili
ENSAMEG00000007461	RPUSD1	98	60.000	ENSNBRG00000006457	rpusd1	98	60.000	Neolamprologus_brichardi
ENSAMEG00000007461	RPUSD1	55	77.143	ENSNLEG00000008424	-	100	77.143	Nomascus_leucogenys
ENSAMEG00000007461	RPUSD1	100	72.277	ENSMEUG00000016049	RPUSD1	100	72.277	Notamacropus_eugenii
ENSAMEG00000007461	RPUSD1	99	77.333	ENSOPRG00000008340	RPUSD1	99	77.333	Ochotona_princeps
ENSAMEG00000007461	RPUSD1	100	81.046	ENSODEG00000016945	RPUSD1	100	81.046	Octodon_degus
ENSAMEG00000007461	RPUSD1	98	56.452	ENSONIG00000015672	rpusd1	99	57.980	Oreochromis_niloticus
ENSAMEG00000007461	RPUSD1	99	59.736	ENSORLG00000013009	rpusd1	99	59.736	Oryzias_latipes
ENSAMEG00000007461	RPUSD1	99	59.406	ENSORLG00020010382	rpusd1	99	59.406	Oryzias_latipes_hni
ENSAMEG00000007461	RPUSD1	99	58.746	ENSORLG00015021354	rpusd1	99	58.746	Oryzias_latipes_hsok
ENSAMEG00000007461	RPUSD1	98	58.586	ENSOMEG00000021426	rpusd1	98	58.586	Oryzias_melastigma
ENSAMEG00000007461	RPUSD1	100	81.731	ENSOGAG00000003795	RPUSD1	100	82.372	Otolemur_garnettii
ENSAMEG00000007461	RPUSD1	100	84.416	ENSOARG00000014254	RPUSD1	100	84.740	Ovis_aries
ENSAMEG00000007461	RPUSD1	100	80.128	ENSPPAG00000034797	RPUSD1	100	80.769	Pan_paniscus
ENSAMEG00000007461	RPUSD1	100	90.397	ENSPPRG00000012389	RPUSD1	100	90.397	Panthera_pardus
ENSAMEG00000007461	RPUSD1	100	90.397	ENSPTIG00000008545	RPUSD1	92	90.397	Panthera_tigris_altaica
ENSAMEG00000007461	RPUSD1	100	80.128	ENSPTRG00000007565	RPUSD1	100	80.769	Pan_troglodytes
ENSAMEG00000007461	RPUSD1	100	80.128	ENSPANG00000024401	RPUSD1	100	80.769	Papio_anubis
ENSAMEG00000007461	RPUSD1	99	60.984	ENSPKIG00000018890	rpusd1	91	60.984	Paramormyrops_kingsleyae
ENSAMEG00000007461	RPUSD1	99	67.541	ENSPSIG00000013945	RPUSD1	100	67.541	Pelodiscus_sinensis
ENSAMEG00000007461	RPUSD1	99	58.054	ENSPMGG00000014950	rpusd1	99	58.054	Periophthalmus_magnuspinnatus
ENSAMEG00000007461	RPUSD1	100	83.007	ENSPEMG00000000497	Rpusd1	100	83.007	Peromyscus_maniculatus_bairdii
ENSAMEG00000007461	RPUSD1	98	52.632	ENSPMAG00000001563	rpusd1	99	52.632	Petromyzon_marinus
ENSAMEG00000007461	RPUSD1	100	72.459	ENSPCIG00000021216	-	94	72.459	Phascolarctos_cinereus
ENSAMEG00000007461	RPUSD1	98	59.197	ENSPFOG00000007946	rpusd1	98	59.197	Poecilia_formosa
ENSAMEG00000007461	RPUSD1	98	59.197	ENSPLAG00000011925	rpusd1	98	59.197	Poecilia_latipinna
ENSAMEG00000007461	RPUSD1	98	58.863	ENSPMEG00000002910	rpusd1	98	58.863	Poecilia_mexicana
ENSAMEG00000007461	RPUSD1	98	59.667	ENSPREG00000019851	rpusd1	98	59.667	Poecilia_reticulata
ENSAMEG00000007461	RPUSD1	100	68.874	ENSPCAG00000002258	RPUSD1	100	68.874	Procavia_capensis
ENSAMEG00000007461	RPUSD1	100	82.692	ENSPCOG00000022582	RPUSD1	100	82.692	Propithecus_coquereli
ENSAMEG00000007461	RPUSD1	100	81.090	ENSPVAG00000013104	RPUSD1	100	81.410	Pteropus_vampyrus
ENSAMEG00000007461	RPUSD1	98	58.983	ENSPNYG00000024076	rpusd1	98	59.661	Pundamilia_nyererei
ENSAMEG00000007461	RPUSD1	98	59.459	ENSPNAG00000013806	rpusd1	99	59.459	Pygocentrus_nattereri
ENSAMEG00000007461	RPUSD1	100	83.987	ENSRNOG00000023639	Rpusd1	100	83.987	Rattus_norvegicus
ENSAMEG00000007461	RPUSD1	100	80.449	ENSRBIG00000030238	RPUSD1	100	81.090	Rhinopithecus_bieti
ENSAMEG00000007461	RPUSD1	100	80.449	ENSRROG00000036663	RPUSD1	100	81.090	Rhinopithecus_roxellana
ENSAMEG00000007461	RPUSD1	100	83.444	ENSSBOG00000033063	RPUSD1	100	83.444	Saimiri_boliviensis_boliviensis
ENSAMEG00000007461	RPUSD1	100	71.148	ENSSHAG00000013500	RPUSD1	100	71.148	Sarcophilus_harrisii
ENSAMEG00000007461	RPUSD1	99	61.130	ENSSFOG00015014394	rpusd1	99	61.130	Scleropages_formosus
ENSAMEG00000007461	RPUSD1	98	57.049	ENSSMAG00000008045	rpusd1	91	57.049	Scophthalmus_maximus
ENSAMEG00000007461	RPUSD1	84	66.798	ENSSDUG00000001829	rpusd1	95	59.672	Seriola_dumerili
ENSAMEG00000007461	RPUSD1	84	66.798	ENSSLDG00000020853	rpusd1	95	59.672	Seriola_lalandi_dorsalis
ENSAMEG00000007461	RPUSD1	55	86.826	ENSSARG00000011187	-	100	86.826	Sorex_araneus
ENSAMEG00000007461	RPUSD1	62	56.477	ENSSPUG00000005119	-	100	56.477	Sphenodon_punctatus
ENSAMEG00000007461	RPUSD1	98	58.689	ENSSPAG00000012708	rpusd1	98	58.689	Stegastes_partitus
ENSAMEG00000007461	RPUSD1	100	83.333	ENSSSCG00000008000	RPUSD1	98	87.402	Sus_scrofa
ENSAMEG00000007461	RPUSD1	84	74.902	ENSTGUG00000015375	RPUSD1	100	74.902	Taeniopygia_guttata
ENSAMEG00000007461	RPUSD1	98	56.863	ENSTRUG00000003041	rpusd1	98	57.190	Takifugu_rubripes
ENSAMEG00000007461	RPUSD1	98	55.405	ENSTNIG00000002660	rpusd1	99	55.405	Tetraodon_nigroviridis
ENSAMEG00000007461	RPUSD1	100	83.974	ENSTTRG00000010167	RPUSD1	100	83.974	Tursiops_truncatus
ENSAMEG00000007461	RPUSD1	100	96.689	ENSUAMG00000012736	RPUSD1	100	96.689	Ursus_americanus
ENSAMEG00000007461	RPUSD1	100	97.020	ENSUMAG00000021174	RPUSD1	100	97.020	Ursus_maritimus
ENSAMEG00000007461	RPUSD1	100	93.377	ENSVVUG00000012357	RPUSD1	100	93.377	Vulpes_vulpes
ENSAMEG00000007461	RPUSD1	100	62.829	ENSXETG00000007184	rpusd1	100	62.829	Xenopus_tropicalis
ENSAMEG00000007461	RPUSD1	98	59.667	ENSXCOG00000017930	rpusd1	98	59.667	Xiphophorus_couchianus
ENSAMEG00000007461	RPUSD1	98	59.000	ENSXMAG00000024084	rpusd1	98	59.000	Xiphophorus_maculatus