EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000007737 (Gene tree)
Gene ID: 100482485
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 19359 bases
Position: chrGL192437.1:1403695-1423053
Accession: 100482485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000008196	PRP21_like_P	PF12230.8	6.4e-52	1	1
ENSAMEP00000008196	Surp	PF01805.20	5e-46	1	2
ENSAMEP00000008196	Surp	PF01805.20	5e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000008537	SF3A1-201	2388	XM_002915568	ENSAMEP00000008196	795 (aa)	XP_002915614	G1LMG5

Gene Model

Click here to download ENSAMEG00000007737's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000007737's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000007737	SF3A1	100	98.365	ENSG00000099995	SF3A1	100	98.365	Homo_sapiens
ENSAMEG00000007737	SF3A1	100	83.312	ENSAPOG00000020465	sf3a1	99	85.419	Acanthochromis_polyacanthus
ENSAMEG00000007737	SF3A1	100	84.065	ENSACIG00000020672	sf3a1	98	85.807	Amphilophus_citrinellus
ENSAMEG00000007737	SF3A1	100	83.042	ENSAOCG00000003060	sf3a1	99	85.419	Amphiprion_ocellaris
ENSAMEG00000007737	SF3A1	100	83.167	ENSAPEG00000010735	sf3a1	99	85.548	Amphiprion_percula
ENSAMEG00000007737	SF3A1	96	85.938	ENSATEG00000021201	sf3a1	97	86.068	Anabas_testudineus
ENSAMEG00000007737	SF3A1	95	94.188	ENSAPLG00000009057	SF3A1	99	93.506	Anas_platyrhynchos
ENSAMEG00000007737	SF3A1	100	85.749	ENSACAG00000009415	SF3A1	97	88.310	Anolis_carolinensis
ENSAMEG00000007737	SF3A1	100	98.491	ENSANAG00000032045	SF3A1	100	98.491	Aotus_nancymaae
ENSAMEG00000007737	SF3A1	100	84.145	ENSACLG00000012622	sf3a1	99	85.917	Astatotilapia_calliptera
ENSAMEG00000007737	SF3A1	99	83.523	ENSAMXG00000005382	sf3a1	98	84.864	Astyanax_mexicanus
ENSAMEG00000007737	SF3A1	100	98.868	ENSBTAG00000003390	SF3A1	100	98.868	Bos_taurus
ENSAMEG00000007737	SF3A1	84	43.447	WBGene00004188	prp-21	90	44.867	Caenorhabditis_elegans
ENSAMEG00000007737	SF3A1	100	98.365	ENSCJAG00000010370	SF3A1	100	98.365	Callithrix_jacchus
ENSAMEG00000007737	SF3A1	100	99.371	ENSCAFG00000012559	SF3A1	100	99.371	Canis_familiaris
ENSAMEG00000007737	SF3A1	100	99.371	ENSCAFG00020000838	SF3A1	100	99.371	Canis_lupus_dingo
ENSAMEG00000007737	SF3A1	100	98.742	ENSCHIG00000018642	SF3A1	100	98.742	Capra_hircus
ENSAMEG00000007737	SF3A1	100	98.994	ENSTSYG00000004739	SF3A1	100	98.994	Carlito_syrichta
ENSAMEG00000007737	SF3A1	94	81.308	ENSCAPG00000015414	SF3A1	98	81.308	Cavia_aperea
ENSAMEG00000007737	SF3A1	100	98.491	ENSCPOG00000014589	SF3A1	100	98.491	Cavia_porcellus
ENSAMEG00000007737	SF3A1	100	98.491	ENSCCAG00000032006	SF3A1	100	98.491	Cebus_capucinus
ENSAMEG00000007737	SF3A1	100	98.491	ENSCATG00000029241	SF3A1	100	98.491	Cercocebus_atys
ENSAMEG00000007737	SF3A1	100	97.862	ENSCLAG00000006508	SF3A1	100	97.862	Chinchilla_lanigera
ENSAMEG00000007737	SF3A1	100	98.365	ENSCSAG00000009470	SF3A1	100	98.365	Chlorocebus_sabaeus
ENSAMEG00000007737	SF3A1	61	99.262	ENSCHOG00000005201	SF3A1	69	99.262	Choloepus_hoffmanni
ENSAMEG00000007737	SF3A1	100	90.704	ENSCPBG00000007595	SF3A1	97	92.068	Chrysemys_picta_bellii
ENSAMEG00000007737	SF3A1	94	52.116	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSAMEG00000007737	SF3A1	96	51.484	ENSCSAVG00000005608	-	92	61.864	Ciona_savignyi
ENSAMEG00000007737	SF3A1	100	98.365	ENSCANG00000033564	SF3A1	100	98.365	Colobus_angolensis_palliatus
ENSAMEG00000007737	SF3A1	100	97.862	ENSCGRG00001008933	Sf3a1	100	97.862	Cricetulus_griseus_chok1gshd
ENSAMEG00000007737	SF3A1	100	97.862	ENSCGRG00000006127	Sf3a1	100	97.862	Cricetulus_griseus_crigri
ENSAMEG00000007737	SF3A1	99	81.772	ENSCSEG00000010792	sf3a1	98	82.835	Cynoglossus_semilaevis
ENSAMEG00000007737	SF3A1	100	82.685	ENSCVAG00000004560	sf3a1	98	84.245	Cyprinodon_variegatus
ENSAMEG00000007737	SF3A1	100	82.206	ENSDARG00000041887	sf3a1	97	84.615	Danio_rerio
ENSAMEG00000007737	SF3A1	100	98.620	ENSDNOG00000010629	SF3A1	100	98.620	Dasypus_novemcinctus
ENSAMEG00000007737	SF3A1	100	98.742	ENSDORG00000005613	Sf3a1	100	98.742	Dipodomys_ordii
ENSAMEG00000007737	SF3A1	79	61.495	FBgn0266917	Sf3a1	85	59.279	Drosophila_melanogaster
ENSAMEG00000007737	SF3A1	84	97.006	ENSETEG00000017194	SF3A1	95	96.856	Echinops_telfairi
ENSAMEG00000007737	SF3A1	100	65.059	ENSEBUG00000001285	sf3a1	96	67.284	Eptatretus_burgeri
ENSAMEG00000007737	SF3A1	100	98.868	ENSEASG00005010254	SF3A1	100	98.868	Equus_asinus_asinus
ENSAMEG00000007737	SF3A1	100	98.868	ENSECAG00000023962	SF3A1	100	98.868	Equus_caballus
ENSAMEG00000007737	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSAMEG00000007737	SF3A1	100	82.000	ENSELUG00000022578	sf3a1	97	83.225	Esox_lucius
ENSAMEG00000007737	SF3A1	100	99.119	ENSFCAG00000011932	SF3A1	100	99.119	Felis_catus
ENSAMEG00000007737	SF3A1	95	93.122	ENSFALG00000006944	SF3A1	97	92.718	Ficedula_albicollis
ENSAMEG00000007737	SF3A1	100	98.365	ENSFDAG00000009560	SF3A1	100	98.365	Fukomys_damarensis
ENSAMEG00000007737	SF3A1	100	83.814	ENSFHEG00000010866	sf3a1	98	85.026	Fundulus_heteroclitus
ENSAMEG00000007737	SF3A1	100	81.030	ENSGMOG00000016024	sf3a1	97	81.453	Gadus_morhua
ENSAMEG00000007737	SF3A1	95	94.180	ENSGALG00000007937	SF3A1	97	93.498	Gallus_gallus
ENSAMEG00000007737	SF3A1	100	82.936	ENSGAFG00000009111	sf3a1	97	84.837	Gambusia_affinis
ENSAMEG00000007737	SF3A1	100	81.910	ENSGACG00000011893	sf3a1	97	83.246	Gasterosteus_aculeatus
ENSAMEG00000007737	SF3A1	96	90.957	ENSGAGG00000000762	SF3A1	97	92.255	Gopherus_agassizii
ENSAMEG00000007737	SF3A1	100	98.365	ENSGGOG00000012631	SF3A1	100	98.365	Gorilla_gorilla
ENSAMEG00000007737	SF3A1	100	84.145	ENSHBUG00000015795	sf3a1	99	85.917	Haplochromis_burtoni
ENSAMEG00000007737	SF3A1	100	98.616	ENSHGLG00000007907	SF3A1	100	98.616	Heterocephalus_glaber_female
ENSAMEG00000007737	SF3A1	100	98.616	ENSHGLG00100013799	SF3A1	100	98.616	Heterocephalus_glaber_male
ENSAMEG00000007737	SF3A1	100	80.176	ENSHCOG00000015423	sf3a1	98	81.356	Hippocampus_comes
ENSAMEG00000007737	SF3A1	96	82.422	ENSIPUG00000002470	sf3a1	98	82.682	Ictalurus_punctatus
ENSAMEG00000007737	SF3A1	100	98.616	ENSSTOG00000013892	SF3A1	100	98.616	Ictidomys_tridecemlineatus
ENSAMEG00000007737	SF3A1	100	98.367	ENSJJAG00000022566	Sf3a1	100	98.367	Jaculus_jaculus
ENSAMEG00000007737	SF3A1	100	82.309	ENSKMAG00000002400	sf3a1	98	84.505	Kryptolebias_marmoratus
ENSAMEG00000007737	SF3A1	100	82.183	ENSLBEG00000022974	sf3a1	97	83.922	Labrus_bergylta
ENSAMEG00000007737	SF3A1	100	86.483	ENSLACG00000003565	SF3A1	97	88.151	Latimeria_chalumnae
ENSAMEG00000007737	SF3A1	100	84.875	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSAMEG00000007737	SF3A1	99	61.471	ENSLAFG00000026032	-	97	62.596	Loxodonta_africana
ENSAMEG00000007737	SF3A1	100	98.365	ENSLAFG00000000448	SF3A1	100	98.365	Loxodonta_africana
ENSAMEG00000007737	SF3A1	100	98.239	ENSMFAG00000031979	SF3A1	100	98.239	Macaca_fascicularis
ENSAMEG00000007737	SF3A1	100	98.239	ENSMMUG00000005547	SF3A1	100	98.239	Macaca_mulatta
ENSAMEG00000007737	SF3A1	100	98.113	ENSMNEG00000037229	SF3A1	100	98.113	Macaca_nemestrina
ENSAMEG00000007737	SF3A1	100	98.365	ENSMLEG00000041908	SF3A1	100	98.365	Mandrillus_leucophaeus
ENSAMEG00000007737	SF3A1	97	85.770	ENSMAMG00000006460	sf3a1	97	85.899	Mastacembelus_armatus
ENSAMEG00000007737	SF3A1	100	84.145	ENSMZEG00005009633	sf3a1	99	85.917	Maylandia_zebra
ENSAMEG00000007737	SF3A1	95	94.180	ENSMGAG00000001330	SF3A1	99	93.498	Meleagris_gallopavo
ENSAMEG00000007737	SF3A1	92	94.945	ENSMAUG00000020317	Sf3a1	94	94.945	Mesocricetus_auratus
ENSAMEG00000007737	SF3A1	100	98.491	ENSMICG00000010038	SF3A1	100	98.491	Microcebus_murinus
ENSAMEG00000007737	SF3A1	100	97.987	ENSMOCG00000008438	Sf3a1	100	97.987	Microtus_ochrogaster
ENSAMEG00000007737	SF3A1	100	81.305	ENSMMOG00000015588	sf3a1	97	82.422	Mola_mola
ENSAMEG00000007737	SF3A1	100	97.233	ENSMODG00000009270	SF3A1	100	97.233	Monodelphis_domestica
ENSAMEG00000007737	SF3A1	100	83.794	ENSMALG00000000148	sf3a1	99	85.831	Monopterus_albus
ENSAMEG00000007737	SF3A1	100	97.484	MGP_CAROLIEiJ_G0016029	Sf3a1	100	97.484	Mus_caroli
ENSAMEG00000007737	SF3A1	100	97.484	ENSMUSG00000002129	Sf3a1	100	97.484	Mus_musculus
ENSAMEG00000007737	SF3A1	100	97.358	MGP_PahariEiJ_G0016862	Sf3a1	100	97.358	Mus_pahari
ENSAMEG00000007737	SF3A1	100	97.484	MGP_SPRETEiJ_G0016870	Sf3a1	100	97.484	Mus_spretus
ENSAMEG00000007737	SF3A1	100	99.245	ENSMPUG00000013144	SF3A1	100	99.245	Mustela_putorius_furo
ENSAMEG00000007737	SF3A1	100	98.616	ENSMLUG00000002139	SF3A1	100	98.616	Myotis_lucifugus
ENSAMEG00000007737	SF3A1	100	98.239	ENSNGAG00000016977	Sf3a1	100	98.239	Nannospalax_galili
ENSAMEG00000007737	SF3A1	100	83.562	ENSNBRG00000016642	sf3a1	96	86.825	Neolamprologus_brichardi
ENSAMEG00000007737	SF3A1	100	98.365	ENSNLEG00000003686	SF3A1	100	98.365	Nomascus_leucogenys
ENSAMEG00000007737	SF3A1	93	87.752	ENSMEUG00000008741	SF3A1	97	87.636	Notamacropus_eugenii
ENSAMEG00000007737	SF3A1	100	98.239	ENSOPRG00000016636	SF3A1	100	98.239	Ochotona_princeps
ENSAMEG00000007737	SF3A1	100	98.239	ENSODEG00000002571	SF3A1	100	98.239	Octodon_degus
ENSAMEG00000007737	SF3A1	100	83.855	ENSONIG00000010848	sf3a1	99	85.290	Oreochromis_niloticus
ENSAMEG00000007737	SF3A1	100	98.742	ENSOCUG00000007633	SF3A1	100	98.742	Oryctolagus_cuniculus
ENSAMEG00000007737	SF3A1	96	81.545	ENSORLG00000013050	sf3a1	98	83.827	Oryzias_latipes
ENSAMEG00000007737	SF3A1	99	80.051	ENSORLG00020003236	sf3a1	94	83.962	Oryzias_latipes_hni
ENSAMEG00000007737	SF3A1	100	81.932	ENSORLG00015017411	sf3a1	97	84.706	Oryzias_latipes_hsok
ENSAMEG00000007737	SF3A1	100	82.560	ENSOMEG00000013362	sf3a1	98	84.245	Oryzias_melastigma
ENSAMEG00000007737	SF3A1	100	98.616	ENSOGAG00000012931	SF3A1	100	98.616	Otolemur_garnettii
ENSAMEG00000007737	SF3A1	100	96.981	ENSOARG00000006849	SF3A1	100	96.981	Ovis_aries
ENSAMEG00000007737	SF3A1	100	97.358	ENSPPAG00000041790	SF3A1	100	97.358	Pan_paniscus
ENSAMEG00000007737	SF3A1	100	99.119	ENSPPRG00000004391	SF3A1	100	99.119	Panthera_pardus
ENSAMEG00000007737	SF3A1	97	99.611	ENSPTIG00000000844	SF3A1	100	99.611	Panthera_tigris_altaica
ENSAMEG00000007737	SF3A1	100	98.365	ENSPTRG00000014240	SF3A1	100	98.365	Pan_troglodytes
ENSAMEG00000007737	SF3A1	100	98.365	ENSPANG00000020772	SF3A1	100	98.365	Papio_anubis
ENSAMEG00000007737	SF3A1	83	93.407	ENSPSIG00000012803	SF3A1	96	94.162	Pelodiscus_sinensis
ENSAMEG00000007737	SF3A1	96	84.031	ENSPMGG00000023096	sf3a1	100	84.031	Periophthalmus_magnuspinnatus
ENSAMEG00000007737	SF3A1	100	98.113	ENSPEMG00000009494	Sf3a1	100	98.113	Peromyscus_maniculatus_bairdii
ENSAMEG00000007737	SF3A1	69	77.577	ENSPMAG00000007139	-	89	79.434	Petromyzon_marinus
ENSAMEG00000007737	SF3A1	100	97.107	ENSPCIG00000022692	SF3A1	100	97.107	Phascolarctos_cinereus
ENSAMEG00000007737	SF3A1	100	74.937	ENSPFOG00000016768	sf3a1	93	78.912	Poecilia_formosa
ENSAMEG00000007737	SF3A1	100	83.438	ENSPLAG00000017268	sf3a1	97	85.098	Poecilia_latipinna
ENSAMEG00000007737	SF3A1	83	85.994	ENSPMEG00000019811	sf3a1	98	85.241	Poecilia_mexicana
ENSAMEG00000007737	SF3A1	100	83.563	ENSPREG00000010347	sf3a1	97	85.621	Poecilia_reticulata
ENSAMEG00000007737	SF3A1	100	98.365	ENSPPYG00000011707	SF3A1	100	98.365	Pongo_abelii
ENSAMEG00000007737	SF3A1	57	99.057	ENSPCAG00000003266	SF3A1	57	99.057	Procavia_capensis
ENSAMEG00000007737	SF3A1	100	98.491	ENSPCOG00000026630	SF3A1	100	98.491	Propithecus_coquereli
ENSAMEG00000007737	SF3A1	100	94.214	ENSPVAG00000017719	SF3A1	94	98.255	Pteropus_vampyrus
ENSAMEG00000007737	SF3A1	100	84.145	ENSPNYG00000018706	sf3a1	99	85.917	Pundamilia_nyererei
ENSAMEG00000007737	SF3A1	99	83.143	ENSPNAG00000003721	sf3a1	98	85.306	Pygocentrus_nattereri
ENSAMEG00000007737	SF3A1	100	97.610	ENSRNOG00000005218	Sf3a1	100	97.610	Rattus_norvegicus
ENSAMEG00000007737	SF3A1	100	98.239	ENSRBIG00000032167	SF3A1	100	98.239	Rhinopithecus_bieti
ENSAMEG00000007737	SF3A1	100	98.239	ENSRROG00000044908	SF3A1	100	98.239	Rhinopithecus_roxellana
ENSAMEG00000007737	SF3A1	97	95.090	ENSSBOG00000021960	SF3A1	100	99.261	Saimiri_boliviensis_boliviensis
ENSAMEG00000007737	SF3A1	97	95.213	ENSSHAG00000003666	SF3A1	98	95.213	Sarcophilus_harrisii
ENSAMEG00000007737	SF3A1	100	83.791	ENSSFOG00015004579	sf3a1	98	85.917	Scleropages_formosus
ENSAMEG00000007737	SF3A1	100	81.430	ENSSMAG00000004275	sf3a1	97	82.876	Scophthalmus_maximus
ENSAMEG00000007737	SF3A1	100	83.689	ENSSDUG00000022219	sf3a1	99	85.161	Seriola_dumerili
ENSAMEG00000007737	SF3A1	100	83.689	ENSSLDG00000012642	sf3a1	99	85.161	Seriola_lalandi_dorsalis
ENSAMEG00000007737	SF3A1	97	95.596	ENSSARG00000005960	SF3A1	99	95.590	Sorex_araneus
ENSAMEG00000007737	SF3A1	96	91.839	ENSSPUG00000018863	SF3A1	97	92.298	Sphenodon_punctatus
ENSAMEG00000007737	SF3A1	100	84.316	ENSSPAG00000011856	sf3a1	99	85.419	Stegastes_partitus
ENSAMEG00000007737	SF3A1	100	98.742	ENSSSCG00000010002	SF3A1	100	98.742	Sus_scrofa
ENSAMEG00000007737	SF3A1	95	94.063	ENSTGUG00000010547	SF3A1	99	93.385	Taeniopygia_guttata
ENSAMEG00000007737	SF3A1	100	81.054	ENSTRUG00000006118	sf3a1	97	82.092	Takifugu_rubripes
ENSAMEG00000007737	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	85.714	Tetraodon_nigroviridis
ENSAMEG00000007737	SF3A1	98	91.495	ENSTBEG00000012771	SF3A1	97	91.440	Tupaia_belangeri
ENSAMEG00000007737	SF3A1	100	98.744	ENSTTRG00000001535	SF3A1	100	98.744	Tursiops_truncatus
ENSAMEG00000007737	SF3A1	99	98.099	ENSUAMG00000006750	SF3A1	99	98.099	Ursus_americanus
ENSAMEG00000007737	SF3A1	99	98.980	ENSUMAG00000016665	SF3A1	99	98.980	Ursus_maritimus
ENSAMEG00000007737	SF3A1	100	99.371	ENSVVUG00000003075	SF3A1	100	99.371	Vulpes_vulpes
ENSAMEG00000007737	SF3A1	100	86.073	ENSXETG00000016144	sf3a1	97	87.143	Xenopus_tropicalis
ENSAMEG00000007737	SF3A1	100	82.685	ENSXCOG00000015653	sf3a1	97	84.575	Xiphophorus_couchianus
ENSAMEG00000007737	SF3A1	100	82.811	ENSXMAG00000002753	sf3a1	97	84.706	Xiphophorus_maculatus