EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000007764 (Gene tree)
Gene ID: 100484375
Gene Symbol: CASC3
Alias: BTZ|MLN51
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 19138 bases
Position: chrGL193207.1:62355-81492
Accession: 100484375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000008219	Btz	PF09405.10	8.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000008561	CASC3-201	2109	-	ENSAMEP00000008219	702 (aa)	XP_002924977	G1LMI1

Gene Model

Click here to download ENSAMEG00000007764's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03013	RNA transport	KEGG
aml03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000007764's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000007764	CASC3	100	95.875	ENSG00000108349	CASC3	100	95.875	Homo_sapiens
ENSAMEG00000007764	CASC3	73	52.090	ENSAPOG00000008467	casc3	73	52.273	Acanthochromis_polyacanthus
ENSAMEG00000007764	CASC3	78	50.899	ENSACIG00000000720	casc3	83	49.474	Amphilophus_citrinellus
ENSAMEG00000007764	CASC3	82	53.698	ENSAOCG00000016676	casc3	75	52.632	Amphiprion_ocellaris
ENSAMEG00000007764	CASC3	73	53.698	ENSAPEG00000006787	casc3	74	52.632	Amphiprion_percula
ENSAMEG00000007764	CASC3	77	53.030	ENSATEG00000017196	casc3	70	52.885	Anabas_testudineus
ENSAMEG00000007764	CASC3	91	72.811	ENSACAG00000002674	CASC3	99	67.852	Anolis_carolinensis
ENSAMEG00000007764	CASC3	66	97.642	ENSANAG00000031954	-	100	97.642	Aotus_nancymaae
ENSAMEG00000007764	CASC3	99	83.141	ENSANAG00000034820	-	99	83.618	Aotus_nancymaae
ENSAMEG00000007764	CASC3	100	95.733	ENSBTAG00000006250	CASC3	100	95.733	Bos_taurus
ENSAMEG00000007764	CASC3	100	93.314	ENSCJAG00000016032	CASC3	100	93.314	Callithrix_jacchus
ENSAMEG00000007764	CASC3	100	98.435	ENSCAFG00000016141	CASC3	100	98.435	Canis_familiaris
ENSAMEG00000007764	CASC3	100	97.443	ENSCAFG00020018882	CASC3	100	97.443	Canis_lupus_dingo
ENSAMEG00000007764	CASC3	100	94.310	ENSCHIG00000006338	CASC3	100	94.310	Capra_hircus
ENSAMEG00000007764	CASC3	100	88.762	ENSTSYG00000002975	CASC3	100	88.762	Carlito_syrichta
ENSAMEG00000007764	CASC3	88	90.260	ENSCAPG00000010514	CASC3	100	90.260	Cavia_aperea
ENSAMEG00000007764	CASC3	100	89.758	ENSCPOG00000015139	CASC3	100	89.616	Cavia_porcellus
ENSAMEG00000007764	CASC3	100	93.466	ENSCCAG00000033620	CASC3	100	93.892	Cebus_capucinus
ENSAMEG00000007764	CASC3	100	95.597	ENSCATG00000033593	CASC3	100	95.597	Cercocebus_atys
ENSAMEG00000007764	CASC3	100	91.181	ENSCLAG00000013730	CASC3	100	91.038	Chinchilla_lanigera
ENSAMEG00000007764	CASC3	100	95.597	ENSCSAG00000002777	CASC3	100	95.597	Chlorocebus_sabaeus
ENSAMEG00000007764	CASC3	99	75.385	ENSCPBG00000004750	CASC3	99	75.281	Chrysemys_picta_bellii
ENSAMEG00000007764	CASC3	100	95.455	ENSCANG00000008814	CASC3	100	95.455	Colobus_angolensis_palliatus
ENSAMEG00000007764	CASC3	100	93.457	ENSCGRG00001014706	Casc3	100	93.314	Cricetulus_griseus_chok1gshd
ENSAMEG00000007764	CASC3	100	86.060	ENSCGRG00000001952	Casc3	96	93.098	Cricetulus_griseus_crigri
ENSAMEG00000007764	CASC3	82	51.911	ENSCSEG00000010047	casc3	56	64.375	Cynoglossus_semilaevis
ENSAMEG00000007764	CASC3	100	95.306	ENSDNOG00000017249	CASC3	96	95.306	Dasypus_novemcinctus
ENSAMEG00000007764	CASC3	100	87.055	ENSETEG00000013720	CASC3	100	86.913	Echinops_telfairi
ENSAMEG00000007764	CASC3	99	37.120	ENSEBUG00000010654	casc3	98	37.284	Eptatretus_burgeri
ENSAMEG00000007764	CASC3	100	95.745	ENSEASG00005002909	CASC3	100	95.858	Equus_asinus_asinus
ENSAMEG00000007764	CASC3	100	97.013	ENSECAG00000019947	CASC3	88	97.013	Equus_caballus
ENSAMEG00000007764	CASC3	73	91.211	ENSEEUG00000014253	CASC3	100	91.211	Erinaceus_europaeus
ENSAMEG00000007764	CASC3	100	98.151	ENSFCAG00000014998	CASC3	100	98.151	Felis_catus
ENSAMEG00000007764	CASC3	88	74.491	ENSFALG00000000412	CASC3	98	74.686	Ficedula_albicollis
ENSAMEG00000007764	CASC3	93	87.823	ENSFDAG00000020696	CASC3	100	87.519	Fukomys_damarensis
ENSAMEG00000007764	CASC3	90	77.516	ENSGALG00000031813	CASC3	99	72.159	Gallus_gallus
ENSAMEG00000007764	CASC3	89	77.742	ENSGAGG00000008432	CASC3	94	78.837	Gopherus_agassizii
ENSAMEG00000007764	CASC3	100	95.590	ENSGGOG00000005067	CASC3	100	95.590	Gorilla_gorilla
ENSAMEG00000007764	CASC3	100	90.469	ENSHGLG00000012117	CASC3	100	90.469	Heterocephalus_glaber_female
ENSAMEG00000007764	CASC3	89	90.096	ENSHGLG00100002268	CASC3	99	90.048	Heterocephalus_glaber_male
ENSAMEG00000007764	CASC3	100	94.026	ENSSTOG00000006374	CASC3	100	94.026	Ictidomys_tridecemlineatus
ENSAMEG00000007764	CASC3	100	90.767	ENSJJAG00000023525	Casc3	100	90.909	Jaculus_jaculus
ENSAMEG00000007764	CASC3	59	63.025	ENSKMAG00000019507	casc3	81	50.087	Kryptolebias_marmoratus
ENSAMEG00000007764	CASC3	75	51.543	ENSLBEG00000005435	casc3	57	60.452	Labrus_bergylta
ENSAMEG00000007764	CASC3	90	61.598	ENSLACG00000013200	CASC3	99	57.103	Latimeria_chalumnae
ENSAMEG00000007764	CASC3	73	73.913	ENSLOCG00000013518	casc3	71	71.014	Lepisosteus_oculatus
ENSAMEG00000007764	CASC3	100	94.168	ENSLAFG00000000606	CASC3	100	94.168	Loxodonta_africana
ENSAMEG00000007764	CASC3	100	95.597	ENSMFAG00000041496	CASC3	100	95.597	Macaca_fascicularis
ENSAMEG00000007764	CASC3	100	95.597	ENSMMUG00000045187	CASC3	100	95.597	Macaca_mulatta
ENSAMEG00000007764	CASC3	89	95.375	ENSMLEG00000029049	CASC3	98	95.353	Mandrillus_leucophaeus
ENSAMEG00000007764	CASC3	75	53.360	ENSMAMG00000005235	casc3	69	55.731	Mastacembelus_armatus
ENSAMEG00000007764	CASC3	86	76.316	ENSMGAG00000013247	CASC3	99	74.797	Meleagris_gallopavo
ENSAMEG00000007764	CASC3	71	91.600	ENSMAUG00000006023	Casc3	80	91.235	Mesocricetus_auratus
ENSAMEG00000007764	CASC3	100	93.040	ENSMICG00000003321	CASC3	100	94.176	Microcebus_murinus
ENSAMEG00000007764	CASC3	100	92.461	ENSMOCG00000013644	Casc3	100	91.323	Microtus_ochrogaster
ENSAMEG00000007764	CASC3	100	78.754	ENSMODG00000013044	CASC3	92	80.453	Monodelphis_domestica
ENSAMEG00000007764	CASC3	100	91.750	MGP_CAROLIEiJ_G0017099	Casc3	100	91.323	Mus_caroli
ENSAMEG00000007764	CASC3	100	91.038	ENSMUSG00000078676	Casc3	100	90.612	Mus_musculus
ENSAMEG00000007764	CASC3	100	91.038	MGP_SPRETEiJ_G0017943	Casc3	100	90.612	Mus_spretus
ENSAMEG00000007764	CASC3	100	97.866	ENSMPUG00000014903	CASC3	100	97.866	Mustela_putorius_furo
ENSAMEG00000007764	CASC3	100	93.191	ENSMLUG00000010520	CASC3	100	93.617	Myotis_lucifugus
ENSAMEG00000007764	CASC3	100	91.750	ENSNGAG00000023121	Casc3	100	91.323	Nannospalax_galili
ENSAMEG00000007764	CASC3	100	94.452	ENSNLEG00000001598	CASC3	100	94.452	Nomascus_leucogenys
ENSAMEG00000007764	CASC3	83	93.827	ENSMEUG00000015662	CASC3	97	71.743	Notamacropus_eugenii
ENSAMEG00000007764	CASC3	73	90.820	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSAMEG00000007764	CASC3	100	90.227	ENSODEG00000017858	CASC3	100	90.510	Octodon_degus
ENSAMEG00000007764	CASC3	79	54.895	ENSOANG00000003499	-	83	70.199	Ornithorhynchus_anatinus
ENSAMEG00000007764	CASC3	100	95.164	ENSOCUG00000002954	CASC3	100	94.595	Oryctolagus_cuniculus
ENSAMEG00000007764	CASC3	99	94.707	ENSOGAG00000034486	CASC3	98	94.707	Otolemur_garnettii
ENSAMEG00000007764	CASC3	100	95.733	ENSOARG00000013239	CASC3	100	95.733	Ovis_aries
ENSAMEG00000007764	CASC3	100	95.875	ENSPPAG00000035069	CASC3	100	95.875	Pan_paniscus
ENSAMEG00000007764	CASC3	100	98.151	ENSPPRG00000023670	CASC3	100	98.151	Panthera_pardus
ENSAMEG00000007764	CASC3	91	97.645	ENSPTIG00000010891	CASC3	91	97.645	Panthera_tigris_altaica
ENSAMEG00000007764	CASC3	100	95.597	ENSPANG00000021708	CASC3	100	95.597	Papio_anubis
ENSAMEG00000007764	CASC3	99	48.116	ENSPKIG00000023186	casc3	98	46.667	Paramormyrops_kingsleyae
ENSAMEG00000007764	CASC3	100	93.030	ENSPEMG00000009774	Casc3	100	92.603	Peromyscus_maniculatus_bairdii
ENSAMEG00000007764	CASC3	100	81.844	ENSPCIG00000025678	CASC3	100	83.121	Phascolarctos_cinereus
ENSAMEG00000007764	CASC3	90	49.922	ENSPFOG00000017632	casc3	100	46.970	Poecilia_formosa
ENSAMEG00000007764	CASC3	95	48.849	ENSPLAG00000005268	casc3	77	54.397	Poecilia_latipinna
ENSAMEG00000007764	CASC3	68	47.541	ENSPMEG00000010299	casc3	73	48.559	Poecilia_mexicana
ENSAMEG00000007764	CASC3	65	67.857	ENSPREG00000011856	casc3	82	51.163	Poecilia_reticulata
ENSAMEG00000007764	CASC3	100	93.883	ENSPPYG00000008467	CASC3	100	93.599	Pongo_abelii
ENSAMEG00000007764	CASC3	100	92.330	ENSPCOG00000008183	CASC3	100	93.466	Propithecus_coquereli
ENSAMEG00000007764	CASC3	100	96.159	ENSPVAG00000008556	CASC3	100	96.159	Pteropus_vampyrus
ENSAMEG00000007764	CASC3	100	95.739	ENSRBIG00000033289	CASC3	100	94.460	Rhinopithecus_bieti
ENSAMEG00000007764	CASC3	100	95.739	ENSRROG00000022337	CASC3	100	95.739	Rhinopithecus_roxellana
ENSAMEG00000007764	CASC3	88	92.557	ENSSBOG00000031406	CASC3	98	94.175	Saimiri_boliviensis_boliviensis
ENSAMEG00000007764	CASC3	89	85.191	ENSSHAG00000013338	CASC3	99	84.800	Sarcophilus_harrisii
ENSAMEG00000007764	CASC3	66	67.361	ENSSMAG00000016096	casc3	56	61.728	Scophthalmus_maximus
ENSAMEG00000007764	CASC3	62	76.271	ENSSLDG00000020308	casc3	69	67.626	Seriola_lalandi_dorsalis
ENSAMEG00000007764	CASC3	84	83.670	ENSSARG00000010378	CASC3	98	83.670	Sorex_araneus
ENSAMEG00000007764	CASC3	75	53.333	ENSSPAG00000023008	casc3	73	52.632	Stegastes_partitus
ENSAMEG00000007764	CASC3	89	94.728	ENSSSCG00000017477	CASC3	98	94.703	Sus_scrofa
ENSAMEG00000007764	CASC3	74	75.189	ENSTGUG00000002300	CASC3	99	75.189	Taeniopygia_guttata
ENSAMEG00000007764	CASC3	66	98.585	ENSTBEG00000017459	CASC3	67	98.585	Tupaia_belangeri
ENSAMEG00000007764	CASC3	86	85.762	ENSTTRG00000016896	CASC3	98	85.690	Tursiops_truncatus
ENSAMEG00000007764	CASC3	100	97.727	ENSUAMG00000015116	CASC3	100	97.727	Ursus_americanus
ENSAMEG00000007764	CASC3	89	98.243	ENSUMAG00000017697	CASC3	99	98.243	Ursus_maritimus
ENSAMEG00000007764	CASC3	75	100.000	ENSVPAG00000000799	CASC3	75	100.000	Vicugna_pacos
ENSAMEG00000007764	CASC3	100	98.578	ENSVVUG00000000997	CASC3	100	98.578	Vulpes_vulpes
ENSAMEG00000007764	CASC3	89	60.535	ENSXETG00000024395	casc3	98	58.065	Xenopus_tropicalis