EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000008461 (Gene tree)
Gene ID: 100484381
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 52908 bases
Position: chrGL193395.1:19798-72705
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000008937	Rif1_N	PF12231.8	2.3e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000009320	RIF1-201	7350	-	ENSAMEP00000008937	2450 (aa)	-	G1LPF7

Gene Model

Click here to download ENSAMEG00000008461's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000008461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000008461	RIF1	100	80.129	ENSG00000080345	RIF1	97	90.024	Homo_sapiens
ENSAMEG00000008461	RIF1	65	50.039	ENSACIG00000017765	rif1	70	50.039	Amphilophus_citrinellus
ENSAMEG00000008461	RIF1	64	48.926	ENSAOCG00000017231	rif1	64	48.926	Amphiprion_ocellaris
ENSAMEG00000008461	RIF1	62	54.414	ENSAPEG00000013228	rif1	63	52.489	Amphiprion_percula
ENSAMEG00000008461	RIF1	64	48.794	ENSATEG00000022887	rif1	65	48.794	Anabas_testudineus
ENSAMEG00000008461	RIF1	84	65.875	ENSAPLG00000007092	RIF1	92	65.875	Anas_platyrhynchos
ENSAMEG00000008461	RIF1	84	57.307	ENSACAG00000003714	RIF1	90	57.307	Anolis_carolinensis
ENSAMEG00000008461	RIF1	100	79.355	ENSANAG00000024840	RIF1	99	79.435	Aotus_nancymaae
ENSAMEG00000008461	RIF1	94	82.568	ENSBTAG00000021020	RIF1	99	82.653	Bos_taurus
ENSAMEG00000008461	RIF1	100	78.750	ENSCJAG00000003138	RIF1	99	78.790	Callithrix_jacchus
ENSAMEG00000008461	RIF1	100	88.361	ENSCAFG00000005670	RIF1	97	88.401	Canis_familiaris
ENSAMEG00000008461	RIF1	100	88.195	ENSCAFG00020016401	RIF1	99	88.235	Canis_lupus_dingo
ENSAMEG00000008461	RIF1	100	82.588	ENSCHIG00000020327	RIF1	99	82.588	Capra_hircus
ENSAMEG00000008461	RIF1	99	77.527	ENSTSYG00000008861	RIF1	100	77.567	Carlito_syrichta
ENSAMEG00000008461	RIF1	79	76.513	ENSCAPG00000008957	RIF1	96	76.513	Cavia_aperea
ENSAMEG00000008461	RIF1	100	71.204	ENSCPOG00000037898	RIF1	99	71.365	Cavia_porcellus
ENSAMEG00000008461	RIF1	100	78.347	ENSCCAG00000024760	RIF1	99	78.427	Cebus_capucinus
ENSAMEG00000008461	RIF1	100	80.315	ENSCATG00000033353	RIF1	99	80.315	Cercocebus_atys
ENSAMEG00000008461	RIF1	96	73.651	ENSCLAG00000001517	RIF1	99	73.777	Chinchilla_lanigera
ENSAMEG00000008461	RIF1	100	80.355	ENSCSAG00000016089	RIF1	99	80.355	Chlorocebus_sabaeus
ENSAMEG00000008461	RIF1	97	74.783	ENSCHOG00000007187	RIF1	97	74.783	Choloepus_hoffmanni
ENSAMEG00000008461	RIF1	95	68.889	ENSCPBG00000025885	RIF1	99	69.444	Chrysemys_picta_bellii
ENSAMEG00000008461	RIF1	100	79.162	ENSCANG00000028962	RIF1	100	79.739	Colobus_angolensis_palliatus
ENSAMEG00000008461	RIF1	100	70.198	ENSCGRG00001024589	Rif1	100	70.319	Cricetulus_griseus_chok1gshd
ENSAMEG00000008461	RIF1	99	71.119	ENSCGRG00000010713	Rif1	100	71.283	Cricetulus_griseus_crigri
ENSAMEG00000008461	RIF1	63	48.424	ENSCVAG00000022479	rif1	67	48.424	Cyprinodon_variegatus
ENSAMEG00000008461	RIF1	99	76.883	ENSDNOG00000011194	RIF1	97	76.883	Dasypus_novemcinctus
ENSAMEG00000008461	RIF1	94	73.748	ENSETEG00000012421	RIF1	92	73.748	Echinops_telfairi
ENSAMEG00000008461	RIF1	96	90.661	ENSEASG00005023434	RIF1	98	94.000	Equus_asinus_asinus
ENSAMEG00000008461	RIF1	96	93.202	ENSECAG00000012679	RIF1	99	93.202	Equus_caballus
ENSAMEG00000008461	RIF1	63	50.758	ENSELUG00000006826	rif1	56	50.831	Esox_lucius
ENSAMEG00000008461	RIF1	100	88.593	ENSFCAG00000029742	RIF1	99	88.593	Felis_catus
ENSAMEG00000008461	RIF1	78	64.329	ENSFALG00000013874	RIF1	91	64.939	Ficedula_albicollis
ENSAMEG00000008461	RIF1	100	75.202	ENSFDAG00000006538	RIF1	99	75.202	Fukomys_damarensis
ENSAMEG00000008461	RIF1	54	50.000	ENSGMOG00000003517	rif1	81	50.000	Gadus_morhua
ENSAMEG00000008461	RIF1	79	64.897	ENSGALG00000012484	RIF1	91	65.192	Gallus_gallus
ENSAMEG00000008461	RIF1	60	54.364	ENSGAFG00000017196	rif1	66	54.833	Gambusia_affinis
ENSAMEG00000008461	RIF1	59	55.833	ENSGACG00000008579	rif1	65	55.328	Gasterosteus_aculeatus
ENSAMEG00000008461	RIF1	89	72.289	ENSGAGG00000012595	RIF1	99	67.200	Gopherus_agassizii
ENSAMEG00000008461	RIF1	90	89.857	ENSGGOG00000040178	RIF1	96	89.857	Gorilla_gorilla
ENSAMEG00000008461	RIF1	73	54.902	ENSHBUG00000007125	rif1	66	54.902	Haplochromis_burtoni
ENSAMEG00000008461	RIF1	95	74.766	ENSHGLG00100009807	RIF1	99	74.766	Heterocephalus_glaber_male
ENSAMEG00000008461	RIF1	64	49.124	ENSHCOG00000015943	rif1	60	49.171	Hippocampus_comes
ENSAMEG00000008461	RIF1	63	51.799	ENSIPUG00000021703	rif1	64	51.867	Ictalurus_punctatus
ENSAMEG00000008461	RIF1	100	78.041	ENSSTOG00000020712	RIF1	99	78.161	Ictidomys_tridecemlineatus
ENSAMEG00000008461	RIF1	99	70.174	ENSJJAG00000023000	Rif1	100	70.376	Jaculus_jaculus
ENSAMEG00000008461	RIF1	64	50.000	ENSKMAG00000002852	rif1	67	50.000	Kryptolebias_marmoratus
ENSAMEG00000008461	RIF1	64	50.709	ENSLBEG00000023196	rif1	60	50.709	Labrus_bergylta
ENSAMEG00000008461	RIF1	86	59.211	ENSLACG00000005425	RIF1	91	59.211	Latimeria_chalumnae
ENSAMEG00000008461	RIF1	63	54.712	ENSLOCG00000002657	rif1	82	53.094	Lepisosteus_oculatus
ENSAMEG00000008461	RIF1	100	79.382	ENSLAFG00000009796	RIF1	100	79.382	Loxodonta_africana
ENSAMEG00000008461	RIF1	100	80.194	ENSMFAG00000032233	RIF1	99	80.194	Macaca_fascicularis
ENSAMEG00000008461	RIF1	100	80.234	ENSMMUG00000008611	RIF1	99	80.234	Macaca_mulatta
ENSAMEG00000008461	RIF1	100	80.153	ENSMNEG00000031616	RIF1	99	80.153	Macaca_nemestrina
ENSAMEG00000008461	RIF1	100	80.355	ENSMLEG00000042945	RIF1	99	80.355	Mandrillus_leucophaeus
ENSAMEG00000008461	RIF1	58	51.222	ENSMAMG00000001745	rif1	59	51.222	Mastacembelus_armatus
ENSAMEG00000008461	RIF1	66	51.072	ENSMZEG00005020920	rif1	72	50.994	Maylandia_zebra
ENSAMEG00000008461	RIF1	84	61.473	ENSMGAG00000012732	RIF1	91	61.756	Meleagris_gallopavo
ENSAMEG00000008461	RIF1	95	86.908	ENSMAUG00000013158	Rif1	99	86.908	Mesocricetus_auratus
ENSAMEG00000008461	RIF1	100	81.983	ENSMICG00000046127	RIF1	99	82.064	Microcebus_murinus
ENSAMEG00000008461	RIF1	100	69.886	ENSMOCG00000009381	Rif1	100	69.886	Microtus_ochrogaster
ENSAMEG00000008461	RIF1	63	50.482	ENSMMOG00000006519	rif1	64	50.482	Mola_mola
ENSAMEG00000008461	RIF1	100	60.941	ENSMODG00000003703	RIF1	99	61.062	Monodelphis_domestica
ENSAMEG00000008461	RIF1	67	46.988	ENSMALG00000016759	rif1	76	47.093	Monopterus_albus
ENSAMEG00000008461	RIF1	100	69.496	MGP_CAROLIEiJ_G0023555	Rif1	100	69.496	Mus_caroli
ENSAMEG00000008461	RIF1	100	69.802	ENSMUSG00000036202	Rif1	100	69.802	Mus_musculus
ENSAMEG00000008461	RIF1	100	68.907	MGP_PahariEiJ_G0025006	Rif1	100	68.907	Mus_pahari
ENSAMEG00000008461	RIF1	100	69.805	MGP_SPRETEiJ_G0024476	Rif1	100	69.927	Mus_spretus
ENSAMEG00000008461	RIF1	100	90.883	ENSMPUG00000000371	RIF1	99	90.883	Mustela_putorius_furo
ENSAMEG00000008461	RIF1	90	80.761	ENSMLUG00000003376	RIF1	100	80.761	Myotis_lucifugus
ENSAMEG00000008461	RIF1	100	72.539	ENSNGAG00000009268	Rif1	99	73.007	Nannospalax_galili
ENSAMEG00000008461	RIF1	63	50.525	ENSNBRG00000014257	rif1	69	49.961	Neolamprologus_brichardi
ENSAMEG00000008461	RIF1	100	78.643	ENSNLEG00000010955	RIF1	99	78.683	Nomascus_leucogenys
ENSAMEG00000008461	RIF1	77	79.018	ENSMEUG00000007601	-	83	79.018	Notamacropus_eugenii
ENSAMEG00000008461	RIF1	100	71.843	ENSODEG00000003950	RIF1	99	72.126	Octodon_degus
ENSAMEG00000008461	RIF1	65	53.571	ENSONIG00000013657	rif1	61	53.571	Oreochromis_niloticus
ENSAMEG00000008461	RIF1	93	67.153	ENSOANG00000006078	-	94	67.153	Ornithorhynchus_anatinus
ENSAMEG00000008461	RIF1	100	76.889	ENSOCUG00000017435	RIF1	99	77.131	Oryctolagus_cuniculus
ENSAMEG00000008461	RIF1	63	48.333	ENSORLG00020001302	rif1	68	48.471	Oryzias_latipes_hni
ENSAMEG00000008461	RIF1	63	48.087	ENSORLG00015000009	rif1	68	48.165	Oryzias_latipes_hsok
ENSAMEG00000008461	RIF1	62	49.035	ENSOMEG00000021513	rif1	66	49.042	Oryzias_melastigma
ENSAMEG00000008461	RIF1	100	78.525	ENSOGAG00000006141	RIF1	99	78.525	Otolemur_garnettii
ENSAMEG00000008461	RIF1	100	82.957	ENSOARG00000008930	RIF1	99	82.957	Ovis_aries
ENSAMEG00000008461	RIF1	100	80.056	ENSPPAG00000023754	RIF1	99	80.097	Pan_paniscus
ENSAMEG00000008461	RIF1	100	88.437	ENSPPRG00000003618	RIF1	99	88.437	Panthera_pardus
ENSAMEG00000008461	RIF1	100	88.437	ENSPTIG00000020652	RIF1	99	88.437	Panthera_tigris_altaica
ENSAMEG00000008461	RIF1	100	80.097	ENSPTRG00000012534	RIF1	99	80.137	Pan_troglodytes
ENSAMEG00000008461	RIF1	100	80.073	ENSPANG00000008525	RIF1	99	80.073	Papio_anubis
ENSAMEG00000008461	RIF1	63	52.516	ENSPKIG00000004267	rif1	67	52.695	Paramormyrops_kingsleyae
ENSAMEG00000008461	RIF1	66	45.927	ENSPMGG00000016141	rif1	79	45.151	Periophthalmus_magnuspinnatus
ENSAMEG00000008461	RIF1	99	71.581	ENSPEMG00000000446	Rif1	99	71.728	Peromyscus_maniculatus_bairdii
ENSAMEG00000008461	RIF1	100	60.370	ENSPCIG00000009185	RIF1	99	60.782	Phascolarctos_cinereus
ENSAMEG00000008461	RIF1	57	52.037	ENSPFOG00000000554	-	64	52.037	Poecilia_formosa
ENSAMEG00000008461	RIF1	63	51.727	ENSPFOG00000017804	rif1	67	51.807	Poecilia_formosa
ENSAMEG00000008461	RIF1	63	51.771	ENSPLAG00000017945	rif1	69	51.771	Poecilia_latipinna
ENSAMEG00000008461	RIF1	63	51.116	ENSPREG00000018052	rif1	76	54.669	Poecilia_reticulata
ENSAMEG00000008461	RIF1	100	80.129	ENSPPYG00000012846	RIF1	99	80.169	Pongo_abelii
ENSAMEG00000008461	RIF1	83	84.848	ENSPCAG00000009032	RIF1	83	84.848	Procavia_capensis
ENSAMEG00000008461	RIF1	100	81.789	ENSPCOG00000027888	RIF1	99	82.031	Propithecus_coquereli
ENSAMEG00000008461	RIF1	93	89.452	ENSPVAG00000014276	RIF1	95	89.452	Pteropus_vampyrus
ENSAMEG00000008461	RIF1	64	49.165	ENSPNYG00000012940	rif1	68	49.165	Pundamilia_nyererei
ENSAMEG00000008461	RIF1	100	68.795	ENSRNOG00000054901	Rif1	100	68.795	Rattus_norvegicus
ENSAMEG00000008461	RIF1	100	79.516	ENSRBIG00000003704	RIF1	99	79.556	Rhinopithecus_bieti
ENSAMEG00000008461	RIF1	100	80.484	ENSRROG00000028206	RIF1	99	80.484	Rhinopithecus_roxellana
ENSAMEG00000008461	RIF1	97	87.097	ENSSBOG00000029530	RIF1	99	87.097	Saimiri_boliviensis_boliviensis
ENSAMEG00000008461	RIF1	100	59.960	ENSSHAG00000018552	RIF1	100	59.448	Sarcophilus_harrisii
ENSAMEG00000008461	RIF1	64	49.299	ENSSMAG00000011704	rif1	62	49.383	Scophthalmus_maximus
ENSAMEG00000008461	RIF1	63	51.055	ENSSDUG00000015632	rif1	82	50.355	Seriola_dumerili
ENSAMEG00000008461	RIF1	50	50.717	ENSSLDG00000019531	rif1	51	50.078	Seriola_lalandi_dorsalis
ENSAMEG00000008461	RIF1	60	84.354	ENSSARG00000007161	-	61	84.354	Sorex_araneus
ENSAMEG00000008461	RIF1	83	70.958	ENSSPUG00000003062	RIF1	90	70.958	Sphenodon_punctatus
ENSAMEG00000008461	RIF1	50	57.755	ENSSPAG00000018359	rif1	75	57.755	Stegastes_partitus
ENSAMEG00000008461	RIF1	100	82.547	ENSSSCG00000016395	RIF1	99	82.668	Sus_scrofa
ENSAMEG00000008461	RIF1	64	50.199	ENSTRUG00000015808	rif1	69	50.199	Takifugu_rubripes
ENSAMEG00000008461	RIF1	64	51.818	ENSTNIG00000011538	rif1	68	51.818	Tetraodon_nigroviridis
ENSAMEG00000008461	RIF1	84	91.083	ENSTBEG00000016082	RIF1	82	91.083	Tupaia_belangeri
ENSAMEG00000008461	RIF1	100	84.395	ENSTTRG00000011190	RIF1	99	84.395	Tursiops_truncatus
ENSAMEG00000008461	RIF1	90	96.195	ENSUAMG00000026385	RIF1	99	96.195	Ursus_americanus
ENSAMEG00000008461	RIF1	100	96.564	ENSUMAG00000000337	RIF1	99	96.564	Ursus_maritimus
ENSAMEG00000008461	RIF1	100	81.058	ENSVPAG00000002162	RIF1	99	81.242	Vicugna_pacos
ENSAMEG00000008461	RIF1	100	88.767	ENSVVUG00000011293	RIF1	99	88.767	Vulpes_vulpes
ENSAMEG00000008461	RIF1	71	46.670	ENSXETG00000004530	rif1	70	47.135	Xenopus_tropicalis
ENSAMEG00000008461	RIF1	64	48.224	ENSXMAG00000000506	rif1	63	48.565	Xiphophorus_maculatus