EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMEG00000008493 (Gene tree)
Gene ID
100482521
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Ailuropoda_melanoleuca
Status
putative
Strand
Plus strand
Length
44535 bases
Position
chrGL193012.1:819803-864337
Accession
100482521
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMEP00000008984CPSF73-100_CPF11718.81.4e-5511
ENSAMEP00000008984Beta-CaspPF10996.83.7e-3411
ENSAMEP00000008984Lactamase_BPF00753.278.3e-1911
ENSAMEP00000008984RMMBLPF07521.128.5e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMET00000009367CPSF3-2012055-ENSAMEP00000008984684 (aa)XP_002923277G1LPK4
Gene Model
Click here to download ENSAMEG00000008493's gene model file
Pathways
Pathway IDPathway NameSource
aml03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000008493's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMEG00000008493CPSF37138.340ENSAMEG00000013755INTS118238.340
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMEG00000008493CPSF310099.415ENSG00000119203CPSF3100100.000Homo_sapiens
ENSAMEG00000008493CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSAMEG00000008493CPSF39985.420ENSAPOG00000022087cpsf39885.420Acanthochromis_polyacanthus
ENSAMEG00000008493CPSF39286.667ENSACIG00000023663CPSF39986.667Amphilophus_citrinellus
ENSAMEG00000008493CPSF39282.962ENSACIG00000009846cpsf39982.962Amphilophus_citrinellus
ENSAMEG00000008493CPSF39988.235ENSAOCG00000010077CPSF39888.235Amphiprion_ocellaris
ENSAMEG00000008493CPSF39985.420ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSAMEG00000008493CPSF39988.235ENSAPEG00000021167CPSF39888.235Amphiprion_percula
ENSAMEG00000008493CPSF39985.567ENSAPEG00000019526cpsf39786.728Amphiprion_percula
ENSAMEG00000008493CPSF39983.529ENSATEG00000014525CPSF39883.529Anabas_testudineus
ENSAMEG00000008493CPSF39985.567ENSATEG00000003959cpsf39885.567Anabas_testudineus
ENSAMEG00000008493CPSF39895.685ENSAPLG00000006941CPSF39895.685Anas_platyrhynchos
ENSAMEG00000008493CPSF39392.598ENSACAG00000001759CPSF39992.598Anolis_carolinensis
ENSAMEG00000008493CPSF310092.836ENSANAG00000031254CPSF310092.836Aotus_nancymaae
ENSAMEG00000008493CPSF39286.508ENSACLG00000018846CPSF39986.508Astatotilapia_calliptera
ENSAMEG00000008493CPSF39785.865ENSACLG00000014484cpsf39985.865Astatotilapia_calliptera
ENSAMEG00000008493CPSF39988.382ENSAMXG00000004786cpsf39888.382Astyanax_mexicanus
ENSAMEG00000008493CPSF310099.854ENSBTAG00000019735CPSF310099.854Bos_taurus
ENSAMEG00000008493CPSF39159.213WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSAMEG00000008493CPSF310099.415ENSCJAG00000006276CPSF310099.415Callithrix_jacchus
ENSAMEG00000008493CPSF3100100.000ENSCAFG00000003375CPSF395100.000Canis_familiaris
ENSAMEG00000008493CPSF390100.000ENSCAFG00020026799CPSF3100100.000Canis_lupus_dingo
ENSAMEG00000008493CPSF310099.854ENSCHIG00000013973CPSF310099.854Capra_hircus
ENSAMEG00000008493CPSF310099.415ENSTSYG00000002967CPSF310099.415Carlito_syrichta
ENSAMEG00000008493CPSF39897.901ENSCAPG00000013851CPSF310097.901Cavia_aperea
ENSAMEG00000008493CPSF310097.953ENSCPOG00000011299CPSF310097.953Cavia_porcellus
ENSAMEG00000008493CPSF310099.269ENSCCAG00000036730CPSF310099.269Cebus_capucinus
ENSAMEG00000008493CPSF310096.788ENSCATG00000014770CPSF399100.000Cercocebus_atys
ENSAMEG00000008493CPSF310097.807ENSCLAG00000002727CPSF310097.807Chinchilla_lanigera
ENSAMEG00000008493CPSF310091.667ENSCSAG00000007125CPSF310091.667Chlorocebus_sabaeus
ENSAMEG00000008493CPSF386100.000ENSCHOG00000000180CPSF38572.281Choloepus_hoffmanni
ENSAMEG00000008493CPSF39996.041ENSCPBG00000014074CPSF39996.041Chrysemys_picta_bellii
ENSAMEG00000008493CPSF39968.029ENSCING00000007214-9868.029Ciona_intestinalis
ENSAMEG00000008493CPSF310086.257ENSCANG00000034435CPSF310086.257Colobus_angolensis_palliatus
ENSAMEG00000008493CPSF310099.123ENSCGRG00001013134Cpsf310099.123Cricetulus_griseus_chok1gshd
ENSAMEG00000008493CPSF310099.123ENSCGRG00000018319Cpsf310099.123Cricetulus_griseus_crigri
ENSAMEG00000008493CPSF39986.931ENSCSEG00000002021CPSF39986.708Cynoglossus_semilaevis
ENSAMEG00000008493CPSF39988.529ENSCVAG00000015067CPSF39888.529Cyprinodon_variegatus
ENSAMEG00000008493CPSF39989.118ENSDARG00000027649cpsf39889.118Danio_rerio
ENSAMEG00000008493CPSF310097.956ENSDNOG00000008940CPSF39597.956Dasypus_novemcinctus
ENSAMEG00000008493CPSF39599.078ENSDORG00000014263Cpsf310099.078Dipodomys_ordii
ENSAMEG00000008493CPSF39967.599FBgn0261065Cpsf739867.599Drosophila_melanogaster
ENSAMEG00000008493CPSF39585.868ENSETEG00000003893CPSF310085.868Echinops_telfairi
ENSAMEG00000008493CPSF39978.797ENSEBUG00000009018cpsf39878.940Eptatretus_burgeri
ENSAMEG00000008493CPSF3100100.000ENSEASG00005003970CPSF3100100.000Equus_asinus_asinus
ENSAMEG00000008493CPSF3100100.000ENSECAG00000019911CPSF3100100.000Equus_caballus
ENSAMEG00000008493CPSF310084.064ENSEEUG00000015422CPSF310084.064Erinaceus_europaeus
ENSAMEG00000008493CPSF39988.235ENSELUG00000013775cpsf39888.235Esox_lucius
ENSAMEG00000008493CPSF310099.854ENSFCAG00000007852CPSF310099.854Felis_catus
ENSAMEG00000008493CPSF39595.518ENSFALG00000006572CPSF310095.518Ficedula_albicollis
ENSAMEG00000008493CPSF39997.361ENSFDAG00000006317CPSF39997.361Fukomys_damarensis
ENSAMEG00000008493CPSF39985.125ENSFHEG00000014774cpsf39885.125Fundulus_heteroclitus
ENSAMEG00000008493CPSF35969.024ENSFHEG00000012186CPSF39969.024Fundulus_heteroclitus
ENSAMEG00000008493CPSF39986.765ENSGMOG00000003157cpsf39886.765Gadus_morhua
ENSAMEG00000008493CPSF39995.007ENSGALG00000016424CPSF39995.007Gallus_gallus
ENSAMEG00000008493CPSF39282.989ENSGAFG00000019449cpsf39982.989Gambusia_affinis
ENSAMEG00000008493CPSF39988.513ENSGAFG00000008016CPSF39888.513Gambusia_affinis
ENSAMEG00000008493CPSF36894.218ENSGAGG00000025583CPSF39394.218Gopherus_agassizii
ENSAMEG00000008493CPSF310097.139ENSGGOG00000001757CPSF310099.528Gorilla_gorilla
ENSAMEG00000008493CPSF39985.756ENSHBUG00000001188cpsf39985.756Haplochromis_burtoni
ENSAMEG00000008493CPSF35981.728ENSHBUG00000014332CPSF39981.728Haplochromis_burtoni
ENSAMEG00000008493CPSF310097.076ENSHGLG00000000666CPSF39997.076Heterocephalus_glaber_female
ENSAMEG00000008493CPSF310097.076ENSHGLG00100007765CPSF39997.076Heterocephalus_glaber_male
ENSAMEG00000008493CPSF39985.044ENSHCOG00000007251cpsf39985.044Hippocampus_comes
ENSAMEG00000008493CPSF39986.471ENSHCOG00000015957CPSF39786.471Hippocampus_comes
ENSAMEG00000008493CPSF39987.206ENSIPUG00000023488cpsf39887.206Ictalurus_punctatus
ENSAMEG00000008493CPSF310099.415ENSSTOG00000004476CPSF310099.415Ictidomys_tridecemlineatus
ENSAMEG00000008493CPSF310097.953ENSJJAG00000023415Cpsf310097.953Jaculus_jaculus
ENSAMEG00000008493CPSF39987.794ENSKMAG00000007317CPSF39887.794Kryptolebias_marmoratus
ENSAMEG00000008493CPSF39984.831ENSKMAG00000002806cpsf39884.831Kryptolebias_marmoratus
ENSAMEG00000008493CPSF39979.295ENSLBEG00000020569cpsf39479.295Labrus_bergylta
ENSAMEG00000008493CPSF39589.352ENSLBEG00000013492CPSF39889.352Labrus_bergylta
ENSAMEG00000008493CPSF35580.161ENSLBEG00000015018-9980.161Labrus_bergylta
ENSAMEG00000008493CPSF39983.800ENSLACG00000008308CPSF39883.800Latimeria_chalumnae
ENSAMEG00000008493CPSF39989.280ENSLOCG00000016823cpsf39889.280Lepisosteus_oculatus
ENSAMEG00000008493CPSF39997.941ENSLAFG00000009467CPSF310097.941Loxodonta_africana
ENSAMEG00000008493CPSF310099.415ENSMFAG00000001339CPSF310099.415Macaca_fascicularis
ENSAMEG00000008493CPSF39599.382ENSMMUG00000018038CPSF310099.382Macaca_mulatta
ENSAMEG00000008493CPSF310086.696ENSMNEG00000039447CPSF310086.696Macaca_nemestrina
ENSAMEG00000008493CPSF310099.561ENSMLEG00000026825CPSF310099.561Mandrillus_leucophaeus
ENSAMEG00000008493CPSF39985.862ENSMAMG00000003076cpsf39885.862Mastacembelus_armatus
ENSAMEG00000008493CPSF39285.443ENSMAMG00000008835CPSF39985.443Mastacembelus_armatus
ENSAMEG00000008493CPSF39985.756ENSMZEG00005014358cpsf39985.756Maylandia_zebra
ENSAMEG00000008493CPSF39988.676ENSMZEG00005006258CPSF39888.676Maylandia_zebra
ENSAMEG00000008493CPSF39895.052ENSMGAG00000013995CPSF310095.052Meleagris_gallopavo
ENSAMEG00000008493CPSF35597.606ENSMAUG00000000166Cpsf310097.606Mesocricetus_auratus
ENSAMEG00000008493CPSF310094.152ENSMICG00000002363CPSF310094.152Microcebus_murinus
ENSAMEG00000008493CPSF310094.298ENSMOCG00000020067Cpsf310094.298Microtus_ochrogaster
ENSAMEG00000008493CPSF39482.481ENSMMOG00000018212CPSF39882.481Mola_mola
ENSAMEG00000008493CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSAMEG00000008493CPSF310096.237ENSMODG00000014703CPSF310096.237Monodelphis_domestica
ENSAMEG00000008493CPSF39986.050ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSAMEG00000008493CPSF39383.438ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSAMEG00000008493CPSF310098.830MGP_CAROLIEiJ_G0017640Cpsf310098.830Mus_caroli
ENSAMEG00000008493CPSF310098.830ENSMUSG00000054309Cpsf310098.830Mus_musculus
ENSAMEG00000008493CPSF310098.684MGP_PahariEiJ_G0029397Cpsf310098.684Mus_pahari
ENSAMEG00000008493CPSF310098.830MGP_SPRETEiJ_G0018481Cpsf310098.830Mus_spretus
ENSAMEG00000008493CPSF310099.269ENSMPUG00000013213CPSF310099.269Mustela_putorius_furo
ENSAMEG00000008493CPSF310098.686ENSMLUG00000010636CPSF310098.686Myotis_lucifugus
ENSAMEG00000008493CPSF310098.977ENSNGAG00000019836Cpsf310098.977Nannospalax_galili
ENSAMEG00000008493CPSF39286.508ENSNBRG00000010525CPSF39986.508Neolamprologus_brichardi
ENSAMEG00000008493CPSF39985.316ENSNBRG00000004770cpsf39985.316Neolamprologus_brichardi
ENSAMEG00000008493CPSF310099.415ENSNLEG00000013359CPSF310099.415Nomascus_leucogenys
ENSAMEG00000008493CPSF310065.497ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSAMEG00000008493CPSF310090.205ENSOPRG00000008902CPSF310090.205Ochotona_princeps
ENSAMEG00000008493CPSF310097.368ENSODEG00000003129CPSF310097.368Octodon_degus
ENSAMEG00000008493CPSF39985.903ENSONIG00000018812cpsf39985.903Oreochromis_niloticus
ENSAMEG00000008493CPSF38296.631ENSOANG00000008577CPSF310096.631Ornithorhynchus_anatinus
ENSAMEG00000008493CPSF310099.415ENSOCUG00000003728CPSF310099.415Oryctolagus_cuniculus
ENSAMEG00000008493CPSF39983.700ENSORLG00000018854cpsf39983.700Oryzias_latipes
ENSAMEG00000008493CPSF39983.554ENSORLG00020013331cpsf39983.554Oryzias_latipes_hni
ENSAMEG00000008493CPSF39983.700ENSORLG00015011017cpsf39983.700Oryzias_latipes_hsok
ENSAMEG00000008493CPSF39983.847ENSOMEG00000010647cpsf39483.847Oryzias_melastigma
ENSAMEG00000008493CPSF310089.474ENSOGAG00000001680CPSF310089.474Otolemur_garnettii
ENSAMEG00000008493CPSF310099.854ENSOARG00000015073CPSF310099.854Ovis_aries
ENSAMEG00000008493CPSF310099.561ENSPPAG00000042457CPSF310099.561Pan_paniscus
ENSAMEG00000008493CPSF310099.561ENSPPRG00000016790CPSF310099.561Panthera_pardus
ENSAMEG00000008493CPSF39999.559ENSPTIG00000003920CPSF310099.528Panthera_tigris_altaica
ENSAMEG00000008493CPSF310099.561ENSPTRG00000011638CPSF310099.561Pan_troglodytes
ENSAMEG00000008493CPSF310099.269ENSPANG00000016798CPSF310099.269Papio_anubis
ENSAMEG00000008493CPSF39989.706ENSPKIG00000023646cpsf39989.457Paramormyrops_kingsleyae
ENSAMEG00000008493CPSF39994.290ENSPSIG00000016144CPSF310094.290Pelodiscus_sinensis
ENSAMEG00000008493CPSF35979.506ENSPMGG00000015311CPSF39979.506Periophthalmus_magnuspinnatus
ENSAMEG00000008493CPSF38385.340ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSAMEG00000008493CPSF310098.538ENSPEMG00000017668Cpsf310098.538Peromyscus_maniculatus_bairdii
ENSAMEG00000008493CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSAMEG00000008493CPSF39897.751ENSPCIG00000009823CPSF39897.853Phascolarctos_cinereus
ENSAMEG00000008493CPSF39988.218ENSPFOG00000010418-9888.218Poecilia_formosa
ENSAMEG00000008493CPSF39984.897ENSPFOG00000015922cpsf39984.897Poecilia_formosa
ENSAMEG00000008493CPSF39984.897ENSPLAG00000000882cpsf39984.897Poecilia_latipinna
ENSAMEG00000008493CPSF35981.436ENSPLAG00000021300-9981.436Poecilia_latipinna
ENSAMEG00000008493CPSF39985.044ENSPMEG00000018309cpsf39985.044Poecilia_mexicana
ENSAMEG00000008493CPSF39982.916ENSPREG00000004482CPSF39882.916Poecilia_reticulata
ENSAMEG00000008493CPSF39282.830ENSPREG00000014875cpsf39982.830Poecilia_reticulata
ENSAMEG00000008493CPSF310095.029ENSPPYG00000012666CPSF310095.029Pongo_abelii
ENSAMEG00000008493CPSF39564.209ENSPCAG00000015042CPSF310064.209Procavia_capensis
ENSAMEG00000008493CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSAMEG00000008493CPSF39999.560ENSPVAG00000005324CPSF39999.560Pteropus_vampyrus
ENSAMEG00000008493CPSF39985.756ENSPNYG00000004405cpsf39985.756Pundamilia_nyererei
ENSAMEG00000008493CPSF37991.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSAMEG00000008493CPSF39987.647ENSPNAG00000023060cpsf39887.647Pygocentrus_nattereri
ENSAMEG00000008493CPSF39998.827ENSRNOG00000052418Cpsf39998.827Rattus_norvegicus
ENSAMEG00000008493CPSF310093.567ENSRBIG00000041615CPSF39994.900Rhinopithecus_bieti
ENSAMEG00000008493CPSF310099.561ENSRROG00000033792CPSF310099.561Rhinopithecus_roxellana
ENSAMEG00000008493CPSF38443.531YLR277CYSH18443.531Saccharomyces_cerevisiae
ENSAMEG00000008493CPSF310093.188ENSSBOG00000027263CPSF310093.188Saimiri_boliviensis_boliviensis
ENSAMEG00000008493CPSF310097.953ENSSHAG00000007024CPSF310097.953Sarcophilus_harrisii
ENSAMEG00000008493CPSF39989.721ENSSFOG00015002108cpsf39989.721Scleropages_formosus
ENSAMEG00000008493CPSF39587.963ENSSMAG00000020534CPSF39587.963Scophthalmus_maximus
ENSAMEG00000008493CPSF39985.903ENSSDUG00000002828cpsf39685.903Seriola_dumerili
ENSAMEG00000008493CPSF39988.382ENSSDUG00000018498CPSF39888.382Seriola_dumerili
ENSAMEG00000008493CPSF39988.382ENSSLDG00000005234CPSF39888.382Seriola_lalandi_dorsalis
ENSAMEG00000008493CPSF39985.903ENSSLDG00000008469cpsf39685.903Seriola_lalandi_dorsalis
ENSAMEG00000008493CPSF310081.579ENSSARG00000005186CPSF310081.579Sorex_araneus
ENSAMEG00000008493CPSF39892.846ENSSPUG00000015525CPSF39792.846Sphenodon_punctatus
ENSAMEG00000008493CPSF39988.088ENSSPAG00000002906CPSF39888.088Stegastes_partitus
ENSAMEG00000008493CPSF39985.567ENSSPAG00000018579cpsf39885.567Stegastes_partitus
ENSAMEG00000008493CPSF39999.854ENSSSCG00000020799CPSF39999.854Sus_scrofa
ENSAMEG00000008493CPSF39995.595ENSTGUG00000013016CPSF39995.595Taeniopygia_guttata
ENSAMEG00000008493CPSF39985.294ENSTRUG00000007030cpsf39785.294Takifugu_rubripes
ENSAMEG00000008493CPSF35973.219ENSTRUG00000013905CPSF39973.219Takifugu_rubripes
ENSAMEG00000008493CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSAMEG00000008493CPSF38899.462ENSTTRG00000000861CPSF38899.462Tursiops_truncatus
ENSAMEG00000008493CPSF39996.921ENSUAMG00000007535CPSF39896.921Ursus_americanus
ENSAMEG00000008493CPSF395100.000ENSUMAG00000003676CPSF3100100.000Ursus_maritimus
ENSAMEG00000008493CPSF39396.057ENSVPAG00000008041CPSF310096.057Vicugna_pacos
ENSAMEG00000008493CPSF3100100.000ENSVVUG00000002194CPSF3100100.000Vulpes_vulpes
ENSAMEG00000008493CPSF39990.015ENSXETG00000008263cpsf39890.015Xenopus_tropicalis
ENSAMEG00000008493CPSF35480.054ENSXCOG00000000957-8780.054Xiphophorus_couchianus
ENSAMEG00000008493CPSF39985.191ENSXCOG00000019695cpsf39985.191Xiphophorus_couchianus
ENSAMEG00000008493CPSF39984.897ENSXMAG00000009784cpsf39984.897Xiphophorus_maculatus
ENSAMEG00000008493CPSF39988.365ENSXMAG00000027291CPSF39888.365Xiphophorus_maculatus

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