EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000008855 (Gene tree)
Gene ID: 100479171
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 18792 bases
Position: chrGL192786.1:256820-275611
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000009332	RTC	PF01137.21	4.1e-47	1	1
ENSAMEP00000009332	RTC_insert	PF05189.13	1.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000009731	RTCA-201	810	-	ENSAMEP00000009332	269 (aa)	-	G1LQJ9

Gene Model

Click here to download ENSAMEG00000008855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000008855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000008855	RTCA	100	94.052	ENSG00000137996	RTCA	73	94.052	Homo_sapiens
ENSAMEG00000008855	RTCA	100	72.119	ENSAPOG00000001345	rtca	73	72.119	Acanthochromis_polyacanthus
ENSAMEG00000008855	RTCA	100	72.862	ENSACIG00000019643	rtca	73	72.862	Amphilophus_citrinellus
ENSAMEG00000008855	RTCA	100	72.119	ENSAOCG00000014979	rtca	73	72.119	Amphiprion_ocellaris
ENSAMEG00000008855	RTCA	100	72.119	ENSAPEG00000006945	rtca	73	72.119	Amphiprion_percula
ENSAMEG00000008855	RTCA	100	71.747	ENSATEG00000006315	rtca	74	71.747	Anabas_testudineus
ENSAMEG00000008855	RTCA	100	82.528	ENSAPLG00000015430	RTCA	76	82.528	Anas_platyrhynchos
ENSAMEG00000008855	RTCA	100	94.424	ENSANAG00000025446	RTCA	73	94.424	Aotus_nancymaae
ENSAMEG00000008855	RTCA	100	72.119	ENSACLG00000020770	rtca	73	72.119	Astatotilapia_calliptera
ENSAMEG00000008855	RTCA	100	73.606	ENSAMXG00000043271	rtca	73	73.606	Astyanax_mexicanus
ENSAMEG00000008855	RTCA	100	95.539	ENSBTAG00000006321	RTCA	73	95.539	Bos_taurus
ENSAMEG00000008855	RTCA	94	30.515	WBGene00022852	ZK1127.5	71	30.515	Caenorhabditis_elegans
ENSAMEG00000008855	RTCA	100	94.424	ENSCJAG00000003398	RTCA	73	94.424	Callithrix_jacchus
ENSAMEG00000008855	RTCA	100	98.141	ENSCAFG00000020010	RTCA	50	98.141	Canis_familiaris
ENSAMEG00000008855	RTCA	100	95.911	ENSCHIG00000018937	RTCA	73	95.911	Capra_hircus
ENSAMEG00000008855	RTCA	100	92.937	ENSTSYG00000011305	RTCA	73	92.937	Carlito_syrichta
ENSAMEG00000008855	RTCA	100	93.309	ENSCCAG00000021844	RTCA	73	93.309	Cebus_capucinus
ENSAMEG00000008855	RTCA	100	94.796	ENSCATG00000019364	RTCA	87	94.796	Cercocebus_atys
ENSAMEG00000008855	RTCA	100	94.424	ENSCLAG00000006125	RTCA	85	94.424	Chinchilla_lanigera
ENSAMEG00000008855	RTCA	100	94.796	ENSCSAG00000001509	RTCA	73	94.796	Chlorocebus_sabaeus
ENSAMEG00000008855	RTCA	99	95.880	ENSCHOG00000005211	RTCA	73	95.880	Choloepus_hoffmanni
ENSAMEG00000008855	RTCA	58	31.098	ENSCHOG00000007216	RCL1	51	31.765	Choloepus_hoffmanni
ENSAMEG00000008855	RTCA	100	82.156	ENSCPBG00000026658	RTCA	73	82.156	Chrysemys_picta_bellii
ENSAMEG00000008855	RTCA	100	56.506	ENSCING00000007875	-	73	56.506	Ciona_intestinalis
ENSAMEG00000008855	RTCA	100	54.647	ENSCSAVG00000007269	-	73	54.647	Ciona_savignyi
ENSAMEG00000008855	RTCA	100	94.424	ENSCANG00000040106	RTCA	73	94.424	Colobus_angolensis_palliatus
ENSAMEG00000008855	RTCA	100	92.565	ENSCGRG00001013163	Rtca	85	92.565	Cricetulus_griseus_chok1gshd
ENSAMEG00000008855	RTCA	100	71.004	ENSCSEG00000000530	rtca	71	71.004	Cynoglossus_semilaevis
ENSAMEG00000008855	RTCA	99	68.045	ENSCVAG00000021809	rtca	72	68.045	Cyprinodon_variegatus
ENSAMEG00000008855	RTCA	100	74.349	ENSDARG00000002215	rtca	73	74.349	Danio_rerio
ENSAMEG00000008855	RTCA	99	95.506	ENSDNOG00000000456	RTCA	73	95.506	Dasypus_novemcinctus
ENSAMEG00000008855	RTCA	100	93.309	ENSDORG00000005448	Rtca	73	93.309	Dipodomys_ordii
ENSAMEG00000008855	RTCA	99	36.090	FBgn0025630	Rtca	72	36.090	Drosophila_melanogaster
ENSAMEG00000008855	RTCA	94	51.969	ENSEBUG00000008556	rtca	66	51.969	Eptatretus_burgeri
ENSAMEG00000008855	RTCA	94	30.038	ENSEBUG00000016621	-	70	30.038	Eptatretus_burgeri
ENSAMEG00000008855	RTCA	100	96.654	ENSEASG00005015926	RTCA	73	96.654	Equus_asinus_asinus
ENSAMEG00000008855	RTCA	100	96.654	ENSECAG00000019831	RTCA	73	96.654	Equus_caballus
ENSAMEG00000008855	RTCA	88	85.169	ENSEEUG00000001165	RTCA	68	85.169	Erinaceus_europaeus
ENSAMEG00000008855	RTCA	100	72.119	ENSELUG00000003741	rtca	74	72.119	Esox_lucius
ENSAMEG00000008855	RTCA	100	97.770	ENSFCAG00000024460	RTCA	73	97.770	Felis_catus
ENSAMEG00000008855	RTCA	90	80.658	ENSFALG00000002443	RTCA	65	80.658	Ficedula_albicollis
ENSAMEG00000008855	RTCA	100	94.424	ENSFDAG00000012070	-	73	94.424	Fukomys_damarensis
ENSAMEG00000008855	RTCA	98	71.698	ENSFDAG00000016084	-	71	71.698	Fukomys_damarensis
ENSAMEG00000008855	RTCA	80	71.163	ENSFHEG00000002868	rtca	96	69.469	Fundulus_heteroclitus
ENSAMEG00000008855	RTCA	100	70.260	ENSGMOG00000013264	rtca	73	70.260	Gadus_morhua
ENSAMEG00000008855	RTCA	100	82.528	ENSGALG00000005277	RTCA	73	82.528	Gallus_gallus
ENSAMEG00000008855	RTCA	100	73.234	ENSGAFG00000011853	rtca	73	73.234	Gambusia_affinis
ENSAMEG00000008855	RTCA	100	69.517	ENSGACG00000013497	rtca	73	69.517	Gasterosteus_aculeatus
ENSAMEG00000008855	RTCA	73	83.163	ENSGAGG00000023306	RTCA	67	83.163	Gopherus_agassizii
ENSAMEG00000008855	RTCA	100	92.937	ENSGGOG00000044018	-	73	92.937	Gorilla_gorilla
ENSAMEG00000008855	RTCA	100	94.052	ENSGGOG00000009546	-	87	94.052	Gorilla_gorilla
ENSAMEG00000008855	RTCA	100	72.119	ENSHBUG00000002114	rtca	73	72.119	Haplochromis_burtoni
ENSAMEG00000008855	RTCA	100	93.309	ENSHGLG00000002617	RTCA	73	93.309	Heterocephalus_glaber_female
ENSAMEG00000008855	RTCA	100	93.309	ENSHGLG00100006056	RTCA	73	93.309	Heterocephalus_glaber_male
ENSAMEG00000008855	RTCA	100	63.941	ENSHCOG00000020628	rtca	65	63.941	Hippocampus_comes
ENSAMEG00000008855	RTCA	100	73.978	ENSIPUG00000024803	rtca	73	73.978	Ictalurus_punctatus
ENSAMEG00000008855	RTCA	100	94.424	ENSSTOG00000013528	-	79	94.424	Ictidomys_tridecemlineatus
ENSAMEG00000008855	RTCA	100	83.643	ENSSTOG00000033099	-	72	83.643	Ictidomys_tridecemlineatus
ENSAMEG00000008855	RTCA	94	65.476	ENSJJAG00000016178	Rtca	73	65.476	Jaculus_jaculus
ENSAMEG00000008855	RTCA	100	73.234	ENSKMAG00000006651	rtca	73	73.234	Kryptolebias_marmoratus
ENSAMEG00000008855	RTCA	100	70.260	ENSLBEG00000028971	rtca	74	70.260	Labrus_bergylta
ENSAMEG00000008855	RTCA	100	70.260	ENSLBEG00000002448	-	83	70.260	Labrus_bergylta
ENSAMEG00000008855	RTCA	100	79.182	ENSLACG00000013666	RTCA	73	79.182	Latimeria_chalumnae
ENSAMEG00000008855	RTCA	100	73.606	ENSLOCG00000000093	rtca	73	73.606	Lepisosteus_oculatus
ENSAMEG00000008855	RTCA	100	93.680	ENSLAFG00000001473	RTCA	73	93.680	Loxodonta_africana
ENSAMEG00000008855	RTCA	100	94.796	ENSMFAG00000034132	RTCA	73	94.796	Macaca_fascicularis
ENSAMEG00000008855	RTCA	100	94.052	ENSMMUG00000019105	RTCA	73	94.052	Macaca_mulatta
ENSAMEG00000008855	RTCA	100	94.796	ENSMNEG00000037163	RTCA	87	94.796	Macaca_nemestrina
ENSAMEG00000008855	RTCA	100	82.900	ENSMLEG00000042151	RTCA	78	82.900	Mandrillus_leucophaeus
ENSAMEG00000008855	RTCA	100	75.093	ENSMAMG00000016536	rtca	73	75.093	Mastacembelus_armatus
ENSAMEG00000008855	RTCA	100	72.119	ENSMZEG00005017945	rtca	73	72.119	Maylandia_zebra
ENSAMEG00000008855	RTCA	100	81.784	ENSMGAG00000006892	RTCA	84	81.784	Meleagris_gallopavo
ENSAMEG00000008855	RTCA	100	91.822	ENSMAUG00000008488	Rtca	73	91.822	Mesocricetus_auratus
ENSAMEG00000008855	RTCA	100	95.539	ENSMICG00000008643	RTCA	87	95.539	Microcebus_murinus
ENSAMEG00000008855	RTCA	100	92.565	ENSMOCG00000016660	Rtca	73	92.565	Microtus_ochrogaster
ENSAMEG00000008855	RTCA	100	73.234	ENSMMOG00000007750	rtca	87	73.234	Mola_mola
ENSAMEG00000008855	RTCA	100	89.963	ENSMODG00000003557	RTCA	73	89.963	Monodelphis_domestica
ENSAMEG00000008855	RTCA	100	74.721	ENSMALG00000020844	rtca	73	74.721	Monopterus_albus
ENSAMEG00000008855	RTCA	100	90.706	MGP_CAROLIEiJ_G0025565	Rtca	100	90.141	Mus_caroli
ENSAMEG00000008855	RTCA	100	89.963	ENSMUSG00000000339	Rtca	100	90.141	Mus_musculus
ENSAMEG00000008855	RTCA	100	90.335	MGP_PahariEiJ_G0027011	Rtca	100	89.437	Mus_pahari
ENSAMEG00000008855	RTCA	100	90.335	MGP_SPRETEiJ_G0026515	Rtca	100	89.437	Mus_spretus
ENSAMEG00000008855	RTCA	100	98.513	ENSMPUG00000012119	RTCA	73	98.513	Mustela_putorius_furo
ENSAMEG00000008855	RTCA	100	88.848	ENSMLUG00000009922	RTCA	73	88.848	Myotis_lucifugus
ENSAMEG00000008855	RTCA	100	91.450	ENSNGAG00000011540	Rtca	78	91.450	Nannospalax_galili
ENSAMEG00000008855	RTCA	100	72.119	ENSNBRG00000003062	rtca	73	72.119	Neolamprologus_brichardi
ENSAMEG00000008855	RTCA	100	94.052	ENSNLEG00000031426	RTCA	73	94.052	Nomascus_leucogenys
ENSAMEG00000008855	RTCA	100	88.104	ENSOPRG00000012092	RTCA	71	88.104	Ochotona_princeps
ENSAMEG00000008855	RTCA	100	93.680	ENSODEG00000006990	RTCA	74	93.680	Octodon_degus
ENSAMEG00000008855	RTCA	100	71.747	ENSONIG00000007753	rtca	73	71.747	Oreochromis_niloticus
ENSAMEG00000008855	RTCA	100	87.361	ENSOANG00000012055	RTCA	83	87.361	Ornithorhynchus_anatinus
ENSAMEG00000008855	RTCA	100	95.539	ENSOCUG00000014247	RTCA	73	95.539	Oryctolagus_cuniculus
ENSAMEG00000008855	RTCA	100	72.491	ENSORLG00000013605	rtca	73	72.491	Oryzias_latipes
ENSAMEG00000008855	RTCA	100	72.491	ENSORLG00020001904	rtca	73	72.491	Oryzias_latipes_hni
ENSAMEG00000008855	RTCA	100	72.491	ENSORLG00015021064	rtca	73	72.491	Oryzias_latipes_hsok
ENSAMEG00000008855	RTCA	100	73.606	ENSOMEG00000000756	rtca	73	73.606	Oryzias_melastigma
ENSAMEG00000008855	RTCA	100	94.796	ENSOGAG00000005627	RTCA	74	94.796	Otolemur_garnettii
ENSAMEG00000008855	RTCA	100	95.167	ENSOARG00000018122	RTCA	84	95.167	Ovis_aries
ENSAMEG00000008855	RTCA	100	94.052	ENSPPAG00000035119	RTCA	87	94.052	Pan_paniscus
ENSAMEG00000008855	RTCA	100	97.398	ENSPPRG00000000350	RTCA	73	97.398	Panthera_pardus
ENSAMEG00000008855	RTCA	100	97.398	ENSPTIG00000012816	RTCA	73	97.398	Panthera_tigris_altaica
ENSAMEG00000008855	RTCA	100	94.052	ENSPTRG00000001004	RTCA	87	94.052	Pan_troglodytes
ENSAMEG00000008855	RTCA	100	94.796	ENSPANG00000000346	RTCA	73	94.796	Papio_anubis
ENSAMEG00000008855	RTCA	100	75.465	ENSPKIG00000001653	rtca	73	75.465	Paramormyrops_kingsleyae
ENSAMEG00000008855	RTCA	100	82.528	ENSPSIG00000011408	RTCA	73	82.528	Pelodiscus_sinensis
ENSAMEG00000008855	RTCA	100	91.822	ENSPEMG00000018582	Rtca	73	91.822	Peromyscus_maniculatus_bairdii
ENSAMEG00000008855	RTCA	100	56.667	ENSPMAG00000009110	rtca	73	56.667	Petromyzon_marinus
ENSAMEG00000008855	RTCA	100	89.963	ENSPCIG00000007684	RTCA	73	89.963	Phascolarctos_cinereus
ENSAMEG00000008855	RTCA	100	73.978	ENSPFOG00000004824	rtca	73	73.978	Poecilia_formosa
ENSAMEG00000008855	RTCA	100	73.978	ENSPLAG00000011753	rtca	73	73.978	Poecilia_latipinna
ENSAMEG00000008855	RTCA	100	73.978	ENSPMEG00000020469	rtca	73	73.978	Poecilia_mexicana
ENSAMEG00000008855	RTCA	100	75.093	ENSPREG00000001365	rtca	73	75.093	Poecilia_reticulata
ENSAMEG00000008855	RTCA	100	94.052	ENSPPYG00000001115	RTCA	73	94.052	Pongo_abelii
ENSAMEG00000008855	RTCA	100	89.219	ENSPCAG00000005076	RTCA	73	89.219	Procavia_capensis
ENSAMEG00000008855	RTCA	100	95.911	ENSPCOG00000005603	RTCA	73	95.911	Propithecus_coquereli
ENSAMEG00000008855	RTCA	100	93.680	ENSPVAG00000009478	RTCA	71	93.680	Pteropus_vampyrus
ENSAMEG00000008855	RTCA	100	72.119	ENSPNYG00000004722	rtca	73	72.119	Pundamilia_nyererei
ENSAMEG00000008855	RTCA	100	74.349	ENSPNAG00000022270	rtca	73	74.349	Pygocentrus_nattereri
ENSAMEG00000008855	RTCA	100	90.706	ENSRNOG00000014575	Rtca	73	90.706	Rattus_norvegicus
ENSAMEG00000008855	RTCA	100	93.680	ENSRBIG00000041180	RTCA	87	93.680	Rhinopithecus_bieti
ENSAMEG00000008855	RTCA	100	93.680	ENSRROG00000024929	RTCA	73	93.680	Rhinopithecus_roxellana
ENSAMEG00000008855	RTCA	100	93.680	ENSSBOG00000028626	RTCA	73	93.680	Saimiri_boliviensis_boliviensis
ENSAMEG00000008855	RTCA	100	89.963	ENSSHAG00000001758	RTCA	73	89.963	Sarcophilus_harrisii
ENSAMEG00000008855	RTCA	100	70.260	ENSSMAG00000014680	rtca	72	70.260	Scophthalmus_maximus
ENSAMEG00000008855	RTCA	100	73.234	ENSSDUG00000015585	rtca	72	73.234	Seriola_dumerili
ENSAMEG00000008855	RTCA	100	72.862	ENSSLDG00000018985	rtca	73	72.862	Seriola_lalandi_dorsalis
ENSAMEG00000008855	RTCA	100	85.502	ENSSARG00000013993	RTCA	85	85.502	Sorex_araneus
ENSAMEG00000008855	RTCA	58	80.255	ENSSPUG00000016255	-	100	80.255	Sphenodon_punctatus
ENSAMEG00000008855	RTCA	100	71.375	ENSSPAG00000011938	rtca	73	71.375	Stegastes_partitus
ENSAMEG00000008855	RTCA	100	95.911	ENSSSCG00000006865	RTCA	73	95.911	Sus_scrofa
ENSAMEG00000008855	RTCA	100	81.413	ENSTGUG00000005154	RTCA	73	81.413	Taeniopygia_guttata
ENSAMEG00000008855	RTCA	100	72.862	ENSTRUG00000008799	rtca	73	72.862	Takifugu_rubripes
ENSAMEG00000008855	RTCA	100	73.606	ENSTNIG00000004725	rtca	73	73.606	Tetraodon_nigroviridis
ENSAMEG00000008855	RTCA	100	95.167	ENSTTRG00000015327	RTCA	71	95.167	Tursiops_truncatus
ENSAMEG00000008855	RTCA	91	94.715	ENSUAMG00000017265	RTCA	69	94.715	Ursus_americanus
ENSAMEG00000008855	RTCA	100	98.513	ENSUMAG00000007881	RTCA	73	98.513	Ursus_maritimus
ENSAMEG00000008855	RTCA	100	83.643	ENSVPAG00000001039	RTCA	71	83.643	Vicugna_pacos
ENSAMEG00000008855	RTCA	100	97.770	ENSVVUG00000022041	RTCA	50	97.770	Vulpes_vulpes
ENSAMEG00000008855	RTCA	99	61.852	ENSXETG00000031661	RTCA	73	61.852	Xenopus_tropicalis
ENSAMEG00000008855	RTCA	100	60.967	ENSXCOG00000008002	rtca	72	60.967	Xiphophorus_couchianus
ENSAMEG00000008855	RTCA	100	73.606	ENSXMAG00000005482	rtca	73	73.606	Xiphophorus_maculatus