EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000008917 (Gene tree)
Gene ID: 100480930
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 22091 bases
Position: chrGL192786.1:377381-399471
Accession: 100480930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000009388	TRM13	PF05206.14	1.8e-91	1	1
ENSAMEP00000009388	zf-U11-48K	PF05253.12	2.2e-09	1	1
ENSAMEP00000009388	zf-TRM13_CCCH	PF11722.8	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000009788	TRMT13-201	1446	XM_002920780	ENSAMEP00000009388	481 (aa)	XP_002920826	D2HFE7

Gene Model

Click here to download ENSAMEG00000008917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000008917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000008917	TRMT13	100	90.437	ENSG00000122435	TRMT13	100	90.437	Homo_sapiens
ENSAMEG00000008917	TRMT13	95	49.004	ENSAPOG00000015131	trmt13	99	49.296	Acanthochromis_polyacanthus
ENSAMEG00000008917	TRMT13	96	51.042	ENSACIG00000005804	trmt13	97	51.042	Amphilophus_citrinellus
ENSAMEG00000008917	TRMT13	95	49.602	ENSAOCG00000023585	trmt13	99	49.602	Amphiprion_ocellaris
ENSAMEG00000008917	TRMT13	95	49.602	ENSAPEG00000004025	trmt13	99	49.602	Amphiprion_percula
ENSAMEG00000008917	TRMT13	99	52.469	ENSATEG00000006597	trmt13	99	52.469	Anabas_testudineus
ENSAMEG00000008917	TRMT13	88	67.840	ENSAPLG00000014924	TRMT13	99	67.840	Anas_platyrhynchos
ENSAMEG00000008917	TRMT13	98	64.482	ENSACAG00000003498	TRMT13	99	64.482	Anolis_carolinensis
ENSAMEG00000008917	TRMT13	100	90.437	ENSANAG00000019525	TRMT13	100	92.661	Aotus_nancymaae
ENSAMEG00000008917	TRMT13	96	53.700	ENSACLG00000020018	trmt13	99	53.700	Astatotilapia_calliptera
ENSAMEG00000008917	TRMT13	95	55.675	ENSAMXG00000017963	trmt13	97	55.414	Astyanax_mexicanus
ENSAMEG00000008917	TRMT13	100	91.060	ENSBTAG00000015781	TRMT13	100	91.060	Bos_taurus
ENSAMEG00000008917	TRMT13	100	88.358	ENSCJAG00000000200	TRMT13	99	92.661	Callithrix_jacchus
ENSAMEG00000008917	TRMT13	65	94.586	ENSCAFG00000020021	TRMT13	99	94.586	Canis_familiaris
ENSAMEG00000008917	TRMT13	57	95.604	ENSCAFG00020011572	TRMT13	95	94.909	Canis_lupus_dingo
ENSAMEG00000008917	TRMT13	100	91.268	ENSCHIG00000015395	TRMT13	100	91.268	Capra_hircus
ENSAMEG00000008917	TRMT13	98	80.042	ENSTSYG00000010811	TRMT13	98	87.879	Carlito_syrichta
ENSAMEG00000008917	TRMT13	75	67.493	ENSCAPG00000009085	TRMT13	100	68.044	Cavia_aperea
ENSAMEG00000008917	TRMT13	100	87.110	ENSCPOG00000000694	TRMT13	100	87.110	Cavia_porcellus
ENSAMEG00000008917	TRMT13	100	90.437	ENSCCAG00000023772	TRMT13	100	91.743	Cebus_capucinus
ENSAMEG00000008917	TRMT13	100	90.021	ENSCATG00000033556	TRMT13	100	91.743	Cercocebus_atys
ENSAMEG00000008917	TRMT13	89	83.607	ENSCLAG00000008220	TRMT13	100	83.841	Chinchilla_lanigera
ENSAMEG00000008917	TRMT13	100	90.644	ENSCSAG00000001506	TRMT13	100	90.644	Chlorocebus_sabaeus
ENSAMEG00000008917	TRMT13	100	69.647	ENSCPBG00000026671	TRMT13	100	69.647	Chrysemys_picta_bellii
ENSAMEG00000008917	TRMT13	100	90.852	ENSCANG00000034659	TRMT13	100	92.661	Colobus_angolensis_palliatus
ENSAMEG00000008917	TRMT13	99	84.407	ENSCGRG00001021601	Trmt13	99	84.407	Cricetulus_griseus_chok1gshd
ENSAMEG00000008917	TRMT13	53	81.323	ENSCGRG00000000093	-	99	81.323	Cricetulus_griseus_crigri
ENSAMEG00000008917	TRMT13	95	49.565	ENSCSEG00000000591	trmt13	97	49.234	Cynoglossus_semilaevis
ENSAMEG00000008917	TRMT13	95	49.896	ENSCVAG00000017342	trmt13	93	50.316	Cyprinodon_variegatus
ENSAMEG00000008917	TRMT13	95	57.543	ENSDARG00000102846	trmt13	96	57.543	Danio_rerio
ENSAMEG00000008917	TRMT13	57	88.129	ENSDNOG00000001710	TRMT13	85	88.129	Dasypus_novemcinctus
ENSAMEG00000008917	TRMT13	100	85.239	ENSDORG00000015808	Trmt13	99	85.239	Dipodomys_ordii
ENSAMEG00000008917	TRMT13	96	32.359	FBgn0037435	CG18048	95	31.405	Drosophila_melanogaster
ENSAMEG00000008917	TRMT13	99	76.409	ENSETEG00000005819	TRMT13	99	76.409	Echinops_telfairi
ENSAMEG00000008917	TRMT13	94	46.436	ENSEBUG00000014444	trmt13	96	46.436	Eptatretus_burgeri
ENSAMEG00000008917	TRMT13	100	92.931	ENSEASG00005015918	TRMT13	100	92.931	Equus_asinus_asinus
ENSAMEG00000008917	TRMT13	100	92.931	ENSECAG00000022626	TRMT13	100	92.931	Equus_caballus
ENSAMEG00000008917	TRMT13	79	80.696	ENSEEUG00000000294	TRMT13	80	80.696	Erinaceus_europaeus
ENSAMEG00000008917	TRMT13	98	55.789	ENSELUG00000003803	trmt13	99	55.765	Esox_lucius
ENSAMEG00000008917	TRMT13	100	93.555	ENSFCAG00000030618	TRMT13	100	97.248	Felis_catus
ENSAMEG00000008917	TRMT13	99	65.272	ENSFALG00000002424	TRMT13	99	65.272	Ficedula_albicollis
ENSAMEG00000008917	TRMT13	99	88.025	ENSFDAG00000006342	TRMT13	99	88.025	Fukomys_damarensis
ENSAMEG00000008917	TRMT13	77	52.865	ENSFHEG00000022954	trmt13	97	51.621	Fundulus_heteroclitus
ENSAMEG00000008917	TRMT13	95	49.011	ENSGMOG00000013223	trmt13	100	49.451	Gadus_morhua
ENSAMEG00000008917	TRMT13	95	66.374	ENSGALG00000005290	TRMT13	96	66.231	Gallus_gallus
ENSAMEG00000008917	TRMT13	75	51.075	ENSGAFG00000001577	trmt13	81	51.075	Gambusia_affinis
ENSAMEG00000008917	TRMT13	95	51.288	ENSGACG00000013428	trmt13	97	51.717	Gasterosteus_aculeatus
ENSAMEG00000008917	TRMT13	100	70.124	ENSGAGG00000023303	TRMT13	99	74.182	Gopherus_agassizii
ENSAMEG00000008917	TRMT13	100	90.229	ENSGGOG00000005616	TRMT13	100	90.229	Gorilla_gorilla
ENSAMEG00000008917	TRMT13	96	53.911	ENSHBUG00000007754	trmt13	99	53.911	Haplochromis_burtoni
ENSAMEG00000008917	TRMT13	99	89.706	ENSHGLG00000002164	TRMT13	99	89.706	Heterocephalus_glaber_female
ENSAMEG00000008917	TRMT13	99	89.706	ENSHGLG00100001618	TRMT13	99	89.706	Heterocephalus_glaber_male
ENSAMEG00000008917	TRMT13	96	48.712	ENSHCOG00000020553	trmt13	98	48.498	Hippocampus_comes
ENSAMEG00000008917	TRMT13	95	57.359	ENSIPUG00000024787	trmt13	98	57.451	Ictalurus_punctatus
ENSAMEG00000008917	TRMT13	100	91.060	ENSSTOG00000013483	TRMT13	100	91.060	Ictidomys_tridecemlineatus
ENSAMEG00000008917	TRMT13	100	86.486	ENSJJAG00000018012	Trmt13	100	86.486	Jaculus_jaculus
ENSAMEG00000008917	TRMT13	64	48.742	ENSKMAG00000007639	trmt13	92	48.742	Kryptolebias_marmoratus
ENSAMEG00000008917	TRMT13	96	50.418	ENSLBEG00000020238	trmt13	99	50.418	Labrus_bergylta
ENSAMEG00000008917	TRMT13	99	61.297	ENSLACG00000013153	TRMT13	100	60.891	Latimeria_chalumnae
ENSAMEG00000008917	TRMT13	95	58.297	ENSLOCG00000000418	trmt13	97	58.478	Lepisosteus_oculatus
ENSAMEG00000008917	TRMT13	77	88.649	ENSLAFG00000002383	TRMT13	100	88.649	Loxodonta_africana
ENSAMEG00000008917	TRMT13	100	90.437	ENSMFAG00000034681	TRMT13	100	92.661	Macaca_fascicularis
ENSAMEG00000008917	TRMT13	100	90.437	ENSMMUG00000004243	TRMT13	100	92.661	Macaca_mulatta
ENSAMEG00000008917	TRMT13	100	90.437	ENSMNEG00000036102	TRMT13	100	92.661	Macaca_nemestrina
ENSAMEG00000008917	TRMT13	100	90.437	ENSMLEG00000034258	TRMT13	100	93.578	Mandrillus_leucophaeus
ENSAMEG00000008917	TRMT13	96	51.688	ENSMAMG00000016597	trmt13	98	51.688	Mastacembelus_armatus
ENSAMEG00000008917	TRMT13	96	53.488	ENSMZEG00005020959	trmt13	99	53.488	Maylandia_zebra
ENSAMEG00000008917	TRMT13	89	66.511	ENSMGAG00000006970	TRMT13	100	66.511	Meleagris_gallopavo
ENSAMEG00000008917	TRMT13	99	83.542	ENSMAUG00000010448	Trmt13	99	83.542	Mesocricetus_auratus
ENSAMEG00000008917	TRMT13	100	92.100	ENSMICG00000005283	TRMT13	100	93.578	Microcebus_murinus
ENSAMEG00000008917	TRMT13	99	83.333	ENSMOCG00000019914	Trmt13	99	83.333	Microtus_ochrogaster
ENSAMEG00000008917	TRMT13	54	52.075	ENSMMOG00000007762	trmt13	89	52.075	Mola_mola
ENSAMEG00000008917	TRMT13	99	75.826	ENSMODG00000003646	TRMT13	99	75.826	Monodelphis_domestica
ENSAMEG00000008917	TRMT13	96	51.188	ENSMALG00000020965	trmt13	97	51.188	Monopterus_albus
ENSAMEG00000008917	TRMT13	99	83.857	MGP_CAROLIEiJ_G0025568	Trmt13	94	91.071	Mus_caroli
ENSAMEG00000008917	TRMT13	99	83.682	ENSMUSG00000033439	Trmt13	94	91.071	Mus_musculus
ENSAMEG00000008917	TRMT13	99	84.906	MGP_PahariEiJ_G0027014	Trmt13	93	91.566	Mus_pahari
ENSAMEG00000008917	TRMT13	99	84.277	MGP_SPRETEiJ_G0026518	Trmt13	94	91.071	Mus_spretus
ENSAMEG00000008917	TRMT13	79	91.601	ENSMPUG00000002078	-	100	91.601	Mustela_putorius_furo
ENSAMEG00000008917	TRMT13	100	80.873	ENSMLUG00000002124	TRMT13	100	80.873	Myotis_lucifugus
ENSAMEG00000008917	TRMT13	99	47.619	ENSNBRG00000006783	trmt13	95	49.783	Neolamprologus_brichardi
ENSAMEG00000008917	TRMT13	100	90.021	ENSNLEG00000035917	TRMT13	100	90.826	Nomascus_leucogenys
ENSAMEG00000008917	TRMT13	51	73.387	ENSMEUG00000013346	-	100	73.387	Notamacropus_eugenii
ENSAMEG00000008917	TRMT13	67	88.971	ENSOPRG00000012048	TRMT13	67	88.971	Ochotona_princeps
ENSAMEG00000008917	TRMT13	96	54.025	ENSONIG00000004574	trmt13	99	54.025	Oreochromis_niloticus
ENSAMEG00000008917	TRMT13	89	74.014	ENSOANG00000012057	TRMT13	99	74.014	Ornithorhynchus_anatinus
ENSAMEG00000008917	TRMT13	100	89.397	ENSOCUG00000023095	TRMT13	100	89.397	Oryctolagus_cuniculus
ENSAMEG00000008917	TRMT13	96	49.682	ENSORLG00000003320	trmt13	99	50.318	Oryzias_latipes
ENSAMEG00000008917	TRMT13	95	48.380	ENSORLG00020005972	trmt13	97	50.000	Oryzias_latipes_hni
ENSAMEG00000008917	TRMT13	96	53.291	ENSORLG00015002270	trmt13	99	53.291	Oryzias_latipes_hsok
ENSAMEG00000008917	TRMT13	97	52.431	ENSOMEG00000006724	trmt13	94	53.404	Oryzias_melastigma
ENSAMEG00000008917	TRMT13	98	91.121	ENSOGAG00000005618	TRMT13	97	90.644	Otolemur_garnettii
ENSAMEG00000008917	TRMT13	100	91.268	ENSOARG00000017983	TRMT13	100	91.268	Ovis_aries
ENSAMEG00000008917	TRMT13	100	90.021	ENSPPAG00000043736	TRMT13	100	90.021	Pan_paniscus
ENSAMEG00000008917	TRMT13	100	93.971	ENSPPRG00000003424	TRMT13	100	97.248	Panthera_pardus
ENSAMEG00000008917	TRMT13	100	93.971	ENSPTIG00000018598	TRMT13	100	97.248	Panthera_tigris_altaica
ENSAMEG00000008917	TRMT13	100	90.021	ENSPTRG00000001001	TRMT13	100	90.021	Pan_troglodytes
ENSAMEG00000008917	TRMT13	100	90.644	ENSPANG00000007598	TRMT13	100	92.661	Papio_anubis
ENSAMEG00000008917	TRMT13	96	55.217	ENSPKIG00000001514	trmt13	98	55.217	Paramormyrops_kingsleyae
ENSAMEG00000008917	TRMT13	86	70.264	ENSPSIG00000012703	TRMT13	99	70.264	Pelodiscus_sinensis
ENSAMEG00000008917	TRMT13	96	52.361	ENSPMGG00000013298	trmt13	94	52.361	Periophthalmus_magnuspinnatus
ENSAMEG00000008917	TRMT13	99	82.917	ENSPEMG00000000275	Trmt13	99	82.917	Peromyscus_maniculatus_bairdii
ENSAMEG00000008917	TRMT13	95	45.625	ENSPMAG00000000823	trmt13	100	45.010	Petromyzon_marinus
ENSAMEG00000008917	TRMT13	99	76.091	ENSPCIG00000007699	TRMT13	99	76.715	Phascolarctos_cinereus
ENSAMEG00000008917	TRMT13	99	48.945	ENSPFOG00000008675	trmt13	98	48.945	Poecilia_formosa
ENSAMEG00000008917	TRMT13	95	48.723	ENSPLAG00000009709	trmt13	99	48.723	Poecilia_latipinna
ENSAMEG00000008917	TRMT13	95	47.863	ENSPMEG00000022954	trmt13	99	47.863	Poecilia_mexicana
ENSAMEG00000008917	TRMT13	75	51.613	ENSPREG00000005645	trmt13	91	50.000	Poecilia_reticulata
ENSAMEG00000008917	TRMT13	100	89.813	ENSPPYG00000001120	TRMT13	100	89.813	Pongo_abelii
ENSAMEG00000008917	TRMT13	100	88.150	ENSPCAG00000002340	TRMT13	100	88.150	Procavia_capensis
ENSAMEG00000008917	TRMT13	100	91.892	ENSPCOG00000017984	TRMT13	100	94.495	Propithecus_coquereli
ENSAMEG00000008917	TRMT13	100	91.684	ENSPVAG00000017430	TRMT13	100	91.684	Pteropus_vampyrus
ENSAMEG00000008917	TRMT13	96	52.128	ENSPNYG00000013690	trmt13	99	52.128	Pundamilia_nyererei
ENSAMEG00000008917	TRMT13	95	55.508	ENSPNAG00000022130	trmt13	97	55.508	Pygocentrus_nattereri
ENSAMEG00000008917	TRMT13	99	84.310	ENSRNOG00000015140	Trmt13	96	84.310	Rattus_norvegicus
ENSAMEG00000008917	TRMT13	100	90.852	ENSRBIG00000037686	TRMT13	100	92.661	Rhinopithecus_bieti
ENSAMEG00000008917	TRMT13	100	90.852	ENSRROG00000044057	TRMT13	100	92.661	Rhinopithecus_roxellana
ENSAMEG00000008917	TRMT13	100	90.229	ENSSBOG00000026541	TRMT13	100	92.661	Saimiri_boliviensis_boliviensis
ENSAMEG00000008917	TRMT13	91	77.346	ENSSHAG00000005213	TRMT13	97	77.346	Sarcophilus_harrisii
ENSAMEG00000008917	TRMT13	96	54.624	ENSSFOG00015017560	trmt13	98	54.409	Scleropages_formosus
ENSAMEG00000008917	TRMT13	96	51.579	ENSSMAG00000014592	trmt13	97	51.579	Scophthalmus_maximus
ENSAMEG00000008917	TRMT13	95	50.844	ENSSDUG00000015508	trmt13	97	50.518	Seriola_dumerili
ENSAMEG00000008917	TRMT13	95	51.153	ENSSLDG00000019060	trmt13	96	51.153	Seriola_lalandi_dorsalis
ENSAMEG00000008917	TRMT13	99	76.987	ENSSARG00000010344	TRMT13	99	76.987	Sorex_araneus
ENSAMEG00000008917	TRMT13	96	67.819	ENSSPUG00000016339	TRMT13	100	67.819	Sphenodon_punctatus
ENSAMEG00000008917	TRMT13	98	52.490	ENSSPAG00000011922	trmt13	99	52.567	Stegastes_partitus
ENSAMEG00000008917	TRMT13	100	92.516	ENSSSCG00000006869	TRMT13	100	92.516	Sus_scrofa
ENSAMEG00000008917	TRMT13	97	66.880	ENSTGUG00000005253	TRMT13	100	66.880	Taeniopygia_guttata
ENSAMEG00000008917	TRMT13	95	50.746	ENSTRUG00000008400	trmt13	99	50.734	Takifugu_rubripes
ENSAMEG00000008917	TRMT13	86	74.519	ENSTBEG00000008911	TRMT13	100	74.519	Tupaia_belangeri
ENSAMEG00000008917	TRMT13	51	98.667	ENSTTRG00000015302	-	60	98.667	Tursiops_truncatus
ENSAMEG00000008917	TRMT13	100	92.100	ENSUAMG00000017251	TRMT13	100	92.100	Ursus_americanus
ENSAMEG00000008917	TRMT13	100	98.129	ENSUMAG00000007901	TRMT13	100	98.129	Ursus_maritimus
ENSAMEG00000008917	TRMT13	90	75.000	ENSVPAG00000001034	TRMT13	100	75.000	Vicugna_pacos
ENSAMEG00000008917	TRMT13	99	94.387	ENSVVUG00000021996	TRMT13	99	94.387	Vulpes_vulpes
ENSAMEG00000008917	TRMT13	96	57.692	ENSXETG00000013204	trmt13	97	57.569	Xenopus_tropicalis
ENSAMEG00000008917	TRMT13	95	48.298	ENSXMAG00000010765	trmt13	99	48.298	Xiphophorus_maculatus