EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000008996 (Gene tree)
Gene ID: 100477249
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 29118 bases
Position: chrGL193438.1:382528-411645
Accession: 100477249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000009501	ResIII	PF04851.15	4.7e-26	1	2
ENSAMEP00000009501	ResIII	PF04851.15	4.7e-26	2	2
ENSAMEP00000009501	DEAD	PF00270.29	2.7e-52	1	2
ENSAMEP00000009501	DEAD	PF00270.29	2.7e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000009912	SNRNP200-201	6411	XM_002926475	ENSAMEP00000009501	2136 (aa)	XP_002926521	G1LR17

Gene Model

Click here to download ENSAMEG00000008996's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000008996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000008996	SNRNP200	75	31.220	ENSAMEG00000000432	HFM1	58	31.220
ENSAMEG00000008996	SNRNP200	86	42.260	ENSAMEG00000014749	ASCC3	80	44.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000008996	SNRNP200	100	99.860	ENSG00000144028	SNRNP200	100	99.860	Homo_sapiens
ENSAMEG00000008996	SNRNP200	99	90.935	ENSAPOG00000010223	snrnp200	99	90.824	Acanthochromis_polyacanthus
ENSAMEG00000008996	SNRNP200	97	90.310	ENSACIG00000001764	snrnp200	98	90.310	Amphilophus_citrinellus
ENSAMEG00000008996	SNRNP200	99	90.841	ENSAOCG00000024593	snrnp200	100	90.096	Amphiprion_ocellaris
ENSAMEG00000008996	SNRNP200	97	90.150	ENSAPEG00000012554	snrnp200	100	90.150	Amphiprion_percula
ENSAMEG00000008996	SNRNP200	99	90.700	ENSATEG00000022522	snrnp200	99	90.590	Anabas_testudineus
ENSAMEG00000008996	SNRNP200	99	97.737	ENSAPLG00000004313	SNRNP200	100	97.737	Anas_platyrhynchos
ENSAMEG00000008996	SNRNP200	99	97.555	ENSACAG00000000434	SNRNP200	100	97.555	Anolis_carolinensis
ENSAMEG00000008996	SNRNP200	100	95.289	ENSANAG00000036625	SNRNP200	100	95.709	Aotus_nancymaae
ENSAMEG00000008996	SNRNP200	99	90.559	ENSACLG00000011188	snrnp200	99	90.449	Astatotilapia_calliptera
ENSAMEG00000008996	SNRNP200	99	90.653	ENSAMXG00000005684	snrnp200	99	90.543	Astyanax_mexicanus
ENSAMEG00000008996	SNRNP200	100	99.345	ENSBTAG00000000848	SNRNP200	100	99.345	Bos_taurus
ENSAMEG00000008996	SNRNP200	100	99.813	ENSCJAG00000007514	SNRNP200	100	99.813	Callithrix_jacchus
ENSAMEG00000008996	SNRNP200	100	99.113	ENSCAFG00020019979	SNRNP200	100	99.942	Canis_lupus_dingo
ENSAMEG00000008996	SNRNP200	100	99.532	ENSCHIG00000020611	SNRNP200	100	99.532	Capra_hircus
ENSAMEG00000008996	SNRNP200	100	99.860	ENSTSYG00000010467	SNRNP200	100	99.860	Carlito_syrichta
ENSAMEG00000008996	SNRNP200	99	99.389	ENSCAPG00000017234	SNRNP200	99	99.389	Cavia_aperea
ENSAMEG00000008996	SNRNP200	100	99.672	ENSCPOG00000006776	SNRNP200	100	99.672	Cavia_porcellus
ENSAMEG00000008996	SNRNP200	100	99.813	ENSCCAG00000033962	SNRNP200	100	99.813	Cebus_capucinus
ENSAMEG00000008996	SNRNP200	100	99.860	ENSCATG00000015790	SNRNP200	100	99.860	Cercocebus_atys
ENSAMEG00000008996	SNRNP200	100	99.532	ENSCLAG00000004116	SNRNP200	100	99.532	Chinchilla_lanigera
ENSAMEG00000008996	SNRNP200	100	99.813	ENSCSAG00000017369	SNRNP200	100	99.813	Chlorocebus_sabaeus
ENSAMEG00000008996	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSAMEG00000008996	SNRNP200	100	97.803	ENSCPBG00000022571	SNRNP200	100	97.803	Chrysemys_picta_bellii
ENSAMEG00000008996	SNRNP200	99	76.646	ENSCING00000005082	-	99	76.787	Ciona_intestinalis
ENSAMEG00000008996	SNRNP200	100	94.348	ENSCANG00000033932	SNRNP200	100	99.801	Colobus_angolensis_palliatus
ENSAMEG00000008996	SNRNP200	100	99.719	ENSCGRG00001022610	Snrnp200	100	99.719	Cricetulus_griseus_chok1gshd
ENSAMEG00000008996	SNRNP200	100	99.158	ENSCGRG00000016472	Snrnp200	100	99.158	Cricetulus_griseus_crigri
ENSAMEG00000008996	SNRNP200	100	89.934	ENSCSEG00000016399	snrnp200	100	89.934	Cynoglossus_semilaevis
ENSAMEG00000008996	SNRNP200	100	85.674	ENSCVAG00000017631	snrnp200	99	85.674	Cyprinodon_variegatus
ENSAMEG00000008996	SNRNP200	100	90.403	ENSDARG00000077536	snrnp200	99	90.403	Danio_rerio
ENSAMEG00000008996	SNRNP200	100	98.315	ENSDNOG00000011227	SNRNP200	100	98.315	Dasypus_novemcinctus
ENSAMEG00000008996	SNRNP200	100	97.101	ENSDORG00000005861	Snrnp200	100	97.101	Dipodomys_ordii
ENSAMEG00000008996	SNRNP200	100	74.395	FBgn0263599	l(3)72Ab	99	74.302	Drosophila_melanogaster
ENSAMEG00000008996	SNRNP200	95	99.742	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSAMEG00000008996	SNRNP200	83	81.345	ENSEBUG00000016524	snrnp200	95	81.345	Eptatretus_burgeri
ENSAMEG00000008996	SNRNP200	100	98.788	ENSEASG00005001884	SNRNP200	100	98.788	Equus_asinus_asinus
ENSAMEG00000008996	SNRNP200	100	99.906	ENSECAG00000019675	SNRNP200	100	99.906	Equus_caballus
ENSAMEG00000008996	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSAMEG00000008996	SNRNP200	99	90.888	ENSELUG00000018948	snrnp200	99	90.777	Esox_lucius
ENSAMEG00000008996	SNRNP200	100	99.953	ENSFCAG00000010699	SNRNP200	100	99.953	Felis_catus
ENSAMEG00000008996	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSAMEG00000008996	SNRNP200	100	99.579	ENSFDAG00000004683	SNRNP200	100	99.579	Fukomys_damarensis
ENSAMEG00000008996	SNRNP200	100	87.828	ENSFHEG00000003786	snrnp200	99	87.828	Fundulus_heteroclitus
ENSAMEG00000008996	SNRNP200	100	89.720	ENSGMOG00000004881	snrnp200	99	89.673	Gadus_morhua
ENSAMEG00000008996	SNRNP200	100	88.062	ENSGAFG00000010807	snrnp200	99	88.062	Gambusia_affinis
ENSAMEG00000008996	SNRNP200	100	90.051	ENSGACG00000011474	snrnp200	99	89.958	Gasterosteus_aculeatus
ENSAMEG00000008996	SNRNP200	95	97.738	ENSGAGG00000016069	SNRNP200	99	97.738	Gopherus_agassizii
ENSAMEG00000008996	SNRNP200	100	99.860	ENSGGOG00000005174	SNRNP200	100	99.860	Gorilla_gorilla
ENSAMEG00000008996	SNRNP200	97	87.834	ENSHBUG00000011322	snrnp200	99	87.880	Haplochromis_burtoni
ENSAMEG00000008996	SNRNP200	100	99.672	ENSHGLG00000006654	SNRNP200	100	99.672	Heterocephalus_glaber_female
ENSAMEG00000008996	SNRNP200	100	99.672	ENSHGLG00100018594	SNRNP200	100	99.672	Heterocephalus_glaber_male
ENSAMEG00000008996	SNRNP200	100	99.813	ENSSTOG00000016351	SNRNP200	100	99.813	Ictidomys_tridecemlineatus
ENSAMEG00000008996	SNRNP200	100	99.625	ENSJJAG00000023659	Snrnp200	100	99.625	Jaculus_jaculus
ENSAMEG00000008996	SNRNP200	100	87.587	ENSKMAG00000003665	snrnp200	99	87.587	Kryptolebias_marmoratus
ENSAMEG00000008996	SNRNP200	100	90.309	ENSLBEG00000021585	snrnp200	99	90.309	Labrus_bergylta
ENSAMEG00000008996	SNRNP200	82	94.779	ENSLACG00000000226	SNRNP200	99	94.779	Latimeria_chalumnae
ENSAMEG00000008996	SNRNP200	100	92.228	ENSLOCG00000015198	snrnp200	99	92.228	Lepisosteus_oculatus
ENSAMEG00000008996	SNRNP200	100	99.532	ENSLAFG00000015626	SNRNP200	100	99.532	Loxodonta_africana
ENSAMEG00000008996	SNRNP200	100	99.813	ENSMFAG00000040174	SNRNP200	100	99.813	Macaca_fascicularis
ENSAMEG00000008996	SNRNP200	100	99.813	ENSMMUG00000023261	SNRNP200	100	99.813	Macaca_mulatta
ENSAMEG00000008996	SNRNP200	100	99.766	ENSMNEG00000032398	SNRNP200	100	99.766	Macaca_nemestrina
ENSAMEG00000008996	SNRNP200	100	99.860	ENSMLEG00000019083	SNRNP200	100	99.860	Mandrillus_leucophaeus
ENSAMEG00000008996	SNRNP200	100	90.267	ENSMAMG00000007851	snrnp200	99	90.220	Mastacembelus_armatus
ENSAMEG00000008996	SNRNP200	97	87.834	ENSMZEG00005010787	snrnp200	99	87.880	Maylandia_zebra
ENSAMEG00000008996	SNRNP200	97	97.291	ENSMGAG00000001831	SNRNP200	100	97.291	Meleagris_gallopavo
ENSAMEG00000008996	SNRNP200	100	99.766	ENSMAUG00000011825	Snrnp200	100	99.766	Mesocricetus_auratus
ENSAMEG00000008996	SNRNP200	100	99.813	ENSMICG00000004710	SNRNP200	100	99.813	Microcebus_murinus
ENSAMEG00000008996	SNRNP200	100	97.191	ENSMOCG00000011814	Snrnp200	100	97.191	Microtus_ochrogaster
ENSAMEG00000008996	SNRNP200	99	89.056	ENSMMOG00000014167	snrnp200	99	88.951	Mola_mola
ENSAMEG00000008996	SNRNP200	100	99.017	ENSMODG00000008475	SNRNP200	100	99.017	Monodelphis_domestica
ENSAMEG00000008996	SNRNP200	99	90.841	ENSMALG00000001973	snrnp200	99	90.730	Monopterus_albus
ENSAMEG00000008996	SNRNP200	100	99.579	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.579	Mus_caroli
ENSAMEG00000008996	SNRNP200	100	99.625	ENSMUSG00000003660	Snrnp200	100	99.625	Mus_musculus
ENSAMEG00000008996	SNRNP200	100	99.672	MGP_PahariEiJ_G0025695	Snrnp200	100	99.672	Mus_pahari
ENSAMEG00000008996	SNRNP200	100	99.625	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.625	Mus_spretus
ENSAMEG00000008996	SNRNP200	100	99.860	ENSMPUG00000008949	SNRNP200	100	99.860	Mustela_putorius_furo
ENSAMEG00000008996	SNRNP200	100	95.506	ENSMLUG00000027511	-	100	95.506	Myotis_lucifugus
ENSAMEG00000008996	SNRNP200	100	99.205	ENSMLUG00000010493	SNRNP200	100	99.205	Myotis_lucifugus
ENSAMEG00000008996	SNRNP200	100	99.860	ENSNGAG00000021993	Snrnp200	100	99.860	Nannospalax_galili
ENSAMEG00000008996	SNRNP200	90	90.377	ENSNBRG00000017960	snrnp200	98	90.377	Neolamprologus_brichardi
ENSAMEG00000008996	SNRNP200	100	95.212	ENSNLEG00000000025	SNRNP200	100	95.593	Nomascus_leucogenys
ENSAMEG00000008996	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSAMEG00000008996	SNRNP200	100	95.927	ENSOPRG00000015464	SNRNP200	100	95.927	Ochotona_princeps
ENSAMEG00000008996	SNRNP200	100	99.532	ENSODEG00000008366	SNRNP200	100	99.532	Octodon_degus
ENSAMEG00000008996	SNRNP200	99	90.559	ENSONIG00000010714	snrnp200	99	90.449	Oreochromis_niloticus
ENSAMEG00000008996	SNRNP200	100	99.719	ENSOCUG00000009864	SNRNP200	100	99.719	Oryctolagus_cuniculus
ENSAMEG00000008996	SNRNP200	100	90.262	ENSORLG00000012286	snrnp200	100	90.262	Oryzias_latipes
ENSAMEG00000008996	SNRNP200	100	90.309	ENSORLG00020004648	snrnp200	100	90.309	Oryzias_latipes_hni
ENSAMEG00000008996	SNRNP200	100	90.262	ENSORLG00015019114	snrnp200	100	90.288	Oryzias_latipes_hsok
ENSAMEG00000008996	SNRNP200	99	90.512	ENSOMEG00000011834	snrnp200	99	90.403	Oryzias_melastigma
ENSAMEG00000008996	SNRNP200	100	99.860	ENSOGAG00000006879	SNRNP200	100	99.860	Otolemur_garnettii
ENSAMEG00000008996	SNRNP200	100	98.503	ENSOARG00000013949	SNRNP200	100	98.503	Ovis_aries
ENSAMEG00000008996	SNRNP200	100	99.860	ENSPPAG00000041559	SNRNP200	100	99.860	Pan_paniscus
ENSAMEG00000008996	SNRNP200	100	99.953	ENSPPRG00000004435	SNRNP200	100	99.953	Panthera_pardus
ENSAMEG00000008996	SNRNP200	100	99.485	ENSPTIG00000006380	SNRNP200	100	99.485	Panthera_tigris_altaica
ENSAMEG00000008996	SNRNP200	100	99.860	ENSPTRG00000012230	SNRNP200	100	99.860	Pan_troglodytes
ENSAMEG00000008996	SNRNP200	100	99.813	ENSPANG00000006017	SNRNP200	100	99.813	Papio_anubis
ENSAMEG00000008996	SNRNP200	100	91.152	ENSPKIG00000014762	snrnp200	99	91.152	Paramormyrops_kingsleyae
ENSAMEG00000008996	SNRNP200	100	96.771	ENSPSIG00000008580	SNRNP200	100	96.771	Pelodiscus_sinensis
ENSAMEG00000008996	SNRNP200	100	99.017	ENSPCIG00000023050	SNRNP200	100	99.017	Phascolarctos_cinereus
ENSAMEG00000008996	SNRNP200	100	90.407	ENSPFOG00000015110	snrnp200	99	90.407	Poecilia_formosa
ENSAMEG00000008996	SNRNP200	97	90.275	ENSPLAG00000006711	snrnp200	99	90.275	Poecilia_latipinna
ENSAMEG00000008996	SNRNP200	97	90.220	ENSPMEG00000021166	snrnp200	99	90.220	Poecilia_mexicana
ENSAMEG00000008996	SNRNP200	100	90.496	ENSPREG00000008875	snrnp200	99	90.496	Poecilia_reticulata
ENSAMEG00000008996	SNRNP200	100	99.860	ENSPPYG00000012068	SNRNP200	100	99.860	Pongo_abelii
ENSAMEG00000008996	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSAMEG00000008996	SNRNP200	100	99.860	ENSPCOG00000024608	SNRNP200	100	99.860	Propithecus_coquereli
ENSAMEG00000008996	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSAMEG00000008996	SNRNP200	99	86.042	ENSPNYG00000017476	snrnp200	99	85.948	Pundamilia_nyererei
ENSAMEG00000008996	SNRNP200	100	86.142	ENSPNAG00000010998	snrnp200	99	86.142	Pygocentrus_nattereri
ENSAMEG00000008996	SNRNP200	100	99.766	ENSRNOG00000012157	Snrnp200	100	99.766	Rattus_norvegicus
ENSAMEG00000008996	SNRNP200	100	99.860	ENSRBIG00000044690	-	100	99.860	Rhinopithecus_bieti
ENSAMEG00000008996	SNRNP200	100	99.860	ENSRROG00000037952	-	100	99.860	Rhinopithecus_roxellana
ENSAMEG00000008996	SNRNP200	100	99.813	ENSSBOG00000035471	SNRNP200	100	99.813	Saimiri_boliviensis_boliviensis
ENSAMEG00000008996	SNRNP200	97	98.936	ENSSHAG00000000758	SNRNP200	100	98.936	Sarcophilus_harrisii
ENSAMEG00000008996	SNRNP200	99	91.592	ENSSFOG00015018826	snrnp200	99	91.479	Scleropages_formosus
ENSAMEG00000008996	SNRNP200	99	90.512	ENSSMAG00000005463	snrnp200	99	90.403	Scophthalmus_maximus
ENSAMEG00000008996	SNRNP200	99	90.794	ENSSDUG00000021410	snrnp200	99	90.684	Seriola_dumerili
ENSAMEG00000008996	SNRNP200	99	90.747	ENSSLDG00000010884	snrnp200	99	90.637	Seriola_lalandi_dorsalis
ENSAMEG00000008996	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSAMEG00000008996	SNRNP200	100	97.566	ENSSPUG00000003726	-	100	97.566	Sphenodon_punctatus
ENSAMEG00000008996	SNRNP200	99	90.841	ENSSPAG00000001842	snrnp200	99	90.730	Stegastes_partitus
ENSAMEG00000008996	SNRNP200	100	99.766	ENSSSCG00000008127	SNRNP200	100	99.766	Sus_scrofa
ENSAMEG00000008996	SNRNP200	99	88.037	ENSTGUG00000014475	-	100	88.037	Taeniopygia_guttata
ENSAMEG00000008996	SNRNP200	99	90.465	ENSTRUG00000001307	snrnp200	99	90.356	Takifugu_rubripes
ENSAMEG00000008996	SNRNP200	100	85.992	ENSTNIG00000004320	snrnp200	100	85.992	Tetraodon_nigroviridis
ENSAMEG00000008996	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSAMEG00000008996	SNRNP200	100	99.579	ENSTTRG00000004983	SNRNP200	100	99.579	Tursiops_truncatus
ENSAMEG00000008996	SNRNP200	75	93.023	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSAMEG00000008996	SNRNP200	100	99.953	ENSUMAG00000012385	SNRNP200	100	99.953	Ursus_maritimus
ENSAMEG00000008996	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSAMEG00000008996	SNRNP200	100	99.720	ENSVVUG00000026247	SNRNP200	100	99.720	Vulpes_vulpes
ENSAMEG00000008996	SNRNP200	100	94.390	ENSXETG00000001243	snrnp200	100	94.390	Xenopus_tropicalis
ENSAMEG00000008996	SNRNP200	97	90.525	ENSXMAG00000002058	snrnp200	98	90.525	Xiphophorus_maculatus