EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000009333 (Gene tree)
Gene ID: 100481885
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 67346 bases
Position: chrGL194092.1:240222-307567
Accession: 100481885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000009815	Ago_hook	PF10427.9	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000010242	TNRC6A-201	5736	XM_019809902	ENSAMEP00000009815	1912 (aa)	XP_019665461	G1LRX8

Gene Model

Click here to download ENSAMEG00000009333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000009333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000009333	TNRC6A	92	44.290	ENSAMEG00000013756	TNRC6C	99	44.504
ENSAMEG00000009333	TNRC6A	99	37.437	ENSAMEG00000011025	TNRC6B	98	37.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000009333	TNRC6A	100	96.554	ENSG00000090905	TNRC6A	98	96.554	Homo_sapiens
ENSAMEG00000009333	TNRC6A	99	82.065	ENSAPLG00000009978	TNRC6A	100	82.065	Anas_platyrhynchos
ENSAMEG00000009333	TNRC6A	96	55.504	ENSACAG00000011857	TNRC6A	97	56.238	Anolis_carolinensis
ENSAMEG00000009333	TNRC6A	100	96.395	ENSANAG00000025252	TNRC6A	98	96.395	Aotus_nancymaae
ENSAMEG00000009333	TNRC6A	93	56.965	ENSAMXG00000019919	tnrc6a	99	56.757	Astyanax_mexicanus
ENSAMEG00000009333	TNRC6A	99	96.118	ENSBTAG00000017999	TNRC6A	99	96.118	Bos_taurus
ENSAMEG00000009333	TNRC6A	100	96.096	ENSCJAG00000020677	TNRC6A	98	96.096	Callithrix_jacchus
ENSAMEG00000009333	TNRC6A	100	98.589	ENSCAFG00000017531	TNRC6A	98	98.589	Canis_familiaris
ENSAMEG00000009333	TNRC6A	99	97.432	ENSCAFG00020021160	TNRC6A	99	97.432	Canis_lupus_dingo
ENSAMEG00000009333	TNRC6A	100	93.204	ENSCHIG00000019448	TNRC6A	99	92.312	Capra_hircus
ENSAMEG00000009333	TNRC6A	100	96.184	ENSTSYG00000012711	TNRC6A	99	96.170	Carlito_syrichta
ENSAMEG00000009333	TNRC6A	99	92.678	ENSCPOG00000036684	TNRC6A	98	92.734	Cavia_porcellus
ENSAMEG00000009333	TNRC6A	100	96.503	ENSCCAG00000033664	TNRC6A	99	96.292	Cebus_capucinus
ENSAMEG00000009333	TNRC6A	99	95.109	ENSCATG00000019284	TNRC6A	97	95.109	Cercocebus_atys
ENSAMEG00000009333	TNRC6A	99	88.964	ENSCLAG00000010217	TNRC6A	98	88.970	Chinchilla_lanigera
ENSAMEG00000009333	TNRC6A	100	96.559	ENSCSAG00000006561	TNRC6A	98	96.559	Chlorocebus_sabaeus
ENSAMEG00000009333	TNRC6A	95	91.763	ENSCHOG00000009374	TNRC6A	92	91.763	Choloepus_hoffmanni
ENSAMEG00000009333	TNRC6A	93	80.067	ENSCPBG00000001881	TNRC6A	99	80.124	Chrysemys_picta_bellii
ENSAMEG00000009333	TNRC6A	100	96.816	ENSCANG00000041549	TNRC6A	98	96.816	Colobus_angolensis_palliatus
ENSAMEG00000009333	TNRC6A	100	94.201	ENSCGRG00001015021	Tnrc6a	99	94.201	Cricetulus_griseus_chok1gshd
ENSAMEG00000009333	TNRC6A	99	90.928	ENSCGRG00000013351	Tnrc6a	97	90.771	Cricetulus_griseus_crigri
ENSAMEG00000009333	TNRC6A	93	56.552	ENSDARG00000079688	tnrc6a	99	56.692	Danio_rerio
ENSAMEG00000009333	TNRC6A	99	93.737	ENSDNOG00000013989	TNRC6A	99	93.792	Dasypus_novemcinctus
ENSAMEG00000009333	TNRC6A	99	85.714	ENSETEG00000014658	TNRC6A	99	85.722	Echinops_telfairi
ENSAMEG00000009333	TNRC6A	100	96.864	ENSEASG00005017693	TNRC6A	99	96.751	Equus_asinus_asinus
ENSAMEG00000009333	TNRC6A	100	96.864	ENSECAG00000025056	TNRC6A	99	96.864	Equus_caballus
ENSAMEG00000009333	TNRC6A	99	89.812	ENSEEUG00000004530	TNRC6A	99	89.869	Erinaceus_europaeus
ENSAMEG00000009333	TNRC6A	100	96.552	ENSFCAG00000025236	TNRC6A	99	96.552	Felis_catus
ENSAMEG00000009333	TNRC6A	99	79.917	ENSFALG00000003757	TNRC6A	97	79.835	Ficedula_albicollis
ENSAMEG00000009333	TNRC6A	93	80.717	ENSGALG00000006068	TNRC6A	99	80.830	Gallus_gallus
ENSAMEG00000009333	TNRC6A	93	79.698	ENSGAGG00000023209	TNRC6A	99	79.754	Gopherus_agassizii
ENSAMEG00000009333	TNRC6A	100	96.660	ENSGGOG00000005137	TNRC6A	99	96.397	Gorilla_gorilla
ENSAMEG00000009333	TNRC6A	99	91.009	ENSHGLG00000012474	-	97	91.167	Heterocephalus_glaber_female
ENSAMEG00000009333	TNRC6A	96	72.589	ENSHGLG00000007368	-	93	72.331	Heterocephalus_glaber_female
ENSAMEG00000009333	TNRC6A	99	90.780	ENSHGLG00100012496	-	97	90.780	Heterocephalus_glaber_male
ENSAMEG00000009333	TNRC6A	99	95.253	ENSSTOG00000023394	TNRC6A	96	95.360	Ictidomys_tridecemlineatus
ENSAMEG00000009333	TNRC6A	99	70.485	ENSLACG00000006277	TNRC6A	100	70.691	Latimeria_chalumnae
ENSAMEG00000009333	TNRC6A	100	83.444	ENSLOCG00000005517	tnrc6a	90	83.444	Lepisosteus_oculatus
ENSAMEG00000009333	TNRC6A	100	92.263	ENSLAFG00000004209	TNRC6A	100	92.368	Loxodonta_africana
ENSAMEG00000009333	TNRC6A	99	94.953	ENSMFAG00000003824	TNRC6A	99	94.953	Macaca_fascicularis
ENSAMEG00000009333	TNRC6A	100	96.656	ENSMMUG00000020428	TNRC6A	98	96.656	Macaca_mulatta
ENSAMEG00000009333	TNRC6A	100	96.408	ENSMNEG00000034854	TNRC6A	98	96.408	Macaca_nemestrina
ENSAMEG00000009333	TNRC6A	99	94.655	ENSMLEG00000042737	TNRC6A	97	94.344	Mandrillus_leucophaeus
ENSAMEG00000009333	TNRC6A	99	80.456	ENSMGAG00000006455	TNRC6A	94	82.721	Meleagris_gallopavo
ENSAMEG00000009333	TNRC6A	99	91.375	ENSMAUG00000012750	Tnrc6a	98	91.223	Mesocricetus_auratus
ENSAMEG00000009333	TNRC6A	100	96.710	ENSMICG00000030685	TNRC6A	99	96.447	Microcebus_murinus
ENSAMEG00000009333	TNRC6A	99	91.789	ENSMOCG00000000152	Tnrc6a	98	91.636	Microtus_ochrogaster
ENSAMEG00000009333	TNRC6A	99	82.185	ENSMODG00000016348	TNRC6A	96	82.449	Monodelphis_domestica
ENSAMEG00000009333	TNRC6A	99	90.481	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.711	Mus_caroli
ENSAMEG00000009333	TNRC6A	99	91.056	ENSMUSG00000052707	Tnrc6a	99	94.996	Mus_musculus
ENSAMEG00000009333	TNRC6A	99	91.113	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.139	Mus_pahari
ENSAMEG00000009333	TNRC6A	99	93.410	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.853	Mus_spretus
ENSAMEG00000009333	TNRC6A	99	83.665	ENSMPUG00000012324	TNRC6A	100	83.770	Mustela_putorius_furo
ENSAMEG00000009333	TNRC6A	99	93.438	ENSMLUG00000002701	TNRC6A	100	93.386	Myotis_lucifugus
ENSAMEG00000009333	TNRC6A	99	92.577	ENSNGAG00000020702	Tnrc6a	98	92.581	Nannospalax_galili
ENSAMEG00000009333	TNRC6A	99	93.718	ENSNLEG00000011851	TNRC6A	98	93.685	Nomascus_leucogenys
ENSAMEG00000009333	TNRC6A	77	89.480	ENSMEUG00000015959	-	74	89.480	Notamacropus_eugenii
ENSAMEG00000009333	TNRC6A	96	99.254	ENSOPRG00000005819	TNRC6A	93	99.254	Ochotona_princeps
ENSAMEG00000009333	TNRC6A	99	87.500	ENSODEG00000012802	TNRC6A	98	87.213	Octodon_degus
ENSAMEG00000009333	TNRC6A	89	83.488	ENSOANG00000007672	TNRC6A	99	83.489	Ornithorhynchus_anatinus
ENSAMEG00000009333	TNRC6A	99	92.921	ENSOCUG00000004325	TNRC6A	100	92.816	Oryctolagus_cuniculus
ENSAMEG00000009333	TNRC6A	100	96.501	ENSOGAG00000006666	TNRC6A	98	96.501	Otolemur_garnettii
ENSAMEG00000009333	TNRC6A	100	95.003	ENSOARG00000017950	TNRC6A	99	95.003	Ovis_aries
ENSAMEG00000009333	TNRC6A	100	96.354	ENSPPAG00000028379	TNRC6A	99	96.092	Pan_paniscus
ENSAMEG00000009333	TNRC6A	100	96.552	ENSPPRG00000005861	TNRC6A	98	96.552	Panthera_pardus
ENSAMEG00000009333	TNRC6A	99	95.298	ENSPTIG00000006346	TNRC6A	98	95.300	Panthera_tigris_altaica
ENSAMEG00000009333	TNRC6A	99	96.042	ENSPTRG00000007898	TNRC6A	99	96.042	Pan_troglodytes
ENSAMEG00000009333	TNRC6A	100	93.965	ENSPANG00000018523	TNRC6A	99	93.118	Papio_anubis
ENSAMEG00000009333	TNRC6A	89	75.369	ENSPKIG00000012859	tnrc6a	99	76.757	Paramormyrops_kingsleyae
ENSAMEG00000009333	TNRC6A	79	75.605	ENSPSIG00000003965	TNRC6A	100	75.670	Pelodiscus_sinensis
ENSAMEG00000009333	TNRC6A	99	91.423	ENSPEMG00000016318	Tnrc6a	98	91.218	Peromyscus_maniculatus_bairdii
ENSAMEG00000009333	TNRC6A	99	83.743	ENSPCIG00000012106	TNRC6A	100	84.004	Phascolarctos_cinereus
ENSAMEG00000009333	TNRC6A	99	95.772	ENSPPYG00000007202	TNRC6A	98	96.088	Pongo_abelii
ENSAMEG00000009333	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	92	100.000	Procavia_capensis
ENSAMEG00000009333	TNRC6A	100	94.462	ENSPCOG00000010134	TNRC6A	98	94.462	Propithecus_coquereli
ENSAMEG00000009333	TNRC6A	89	72.209	ENSPVAG00000012066	TNRC6A	97	72.268	Pteropus_vampyrus
ENSAMEG00000009333	TNRC6A	99	93.250	ENSRNOG00000024737	Tnrc6a	98	93.257	Rattus_norvegicus
ENSAMEG00000009333	TNRC6A	100	96.606	ENSRBIG00000014222	TNRC6A	99	96.606	Rhinopithecus_bieti
ENSAMEG00000009333	TNRC6A	100	96.656	ENSRROG00000032360	TNRC6A	98	96.656	Rhinopithecus_roxellana
ENSAMEG00000009333	TNRC6A	100	95.714	ENSSBOG00000036197	TNRC6A	100	97.425	Saimiri_boliviensis_boliviensis
ENSAMEG00000009333	TNRC6A	93	81.874	ENSSHAG00000008811	TNRC6A	99	82.227	Sarcophilus_harrisii
ENSAMEG00000009333	TNRC6A	89	67.814	ENSSFOG00015008920	tnrc6a	99	67.820	Scleropages_formosus
ENSAMEG00000009333	TNRC6A	74	83.877	ENSSARG00000002479	TNRC6A	89	84.239	Sorex_araneus
ENSAMEG00000009333	TNRC6A	92	78.779	ENSSPUG00000010525	TNRC6A	100	78.779	Sphenodon_punctatus
ENSAMEG00000009333	TNRC6A	99	93.580	ENSSSCG00000038870	TNRC6A	100	98.068	Sus_scrofa
ENSAMEG00000009333	TNRC6A	99	78.281	ENSTGUG00000006142	TNRC6A	97	78.281	Taeniopygia_guttata
ENSAMEG00000009333	TNRC6A	100	93.521	ENSTBEG00000014965	TNRC6A	100	93.626	Tupaia_belangeri
ENSAMEG00000009333	TNRC6A	94	97.950	ENSTTRG00000002008	TNRC6A	90	97.950	Tursiops_truncatus
ENSAMEG00000009333	TNRC6A	81	95.235	ENSUAMG00000006656	-	93	95.299	Ursus_americanus
ENSAMEG00000009333	TNRC6A	99	99.003	ENSUMAG00000008274	TNRC6A	99	99.003	Ursus_maritimus
ENSAMEG00000009333	TNRC6A	57	85.493	ENSVPAG00000010764	-	55	85.493	Vicugna_pacos
ENSAMEG00000009333	TNRC6A	100	98.484	ENSVVUG00000005380	TNRC6A	99	98.484	Vulpes_vulpes
ENSAMEG00000009333	TNRC6A	96	65.988	ENSXETG00000030437	TNRC6A	99	66.451	Xenopus_tropicalis