EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000009343 (Gene tree)
Gene ID: 100470271
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 30387 bases
Position: chrGL192829.1:260612-290998
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000009838	MMR_HSR1	PF01926.23	4.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000010265	LSG1-201	1983	-	ENSAMEP00000009838	660 (aa)	-	G1LS01

Gene Model

Click here to download ENSAMEG00000009343's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000009343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000009343	LSG1	99	82.246	ENSG00000041802	LSG1	98	87.931	Homo_sapiens
ENSAMEG00000009343	LSG1	100	64.103	ENSAPOG00000009694	lsg1	100	64.103	Acanthochromis_polyacanthus
ENSAMEG00000009343	LSG1	98	63.524	ENSACIG00000012406	lsg1	100	63.485	Amphilophus_citrinellus
ENSAMEG00000009343	LSG1	100	62.745	ENSAOCG00000016066	lsg1	100	63.554	Amphiprion_ocellaris
ENSAMEG00000009343	LSG1	100	63.499	ENSAPEG00000003252	lsg1	100	63.705	Amphiprion_percula
ENSAMEG00000009343	LSG1	98	62.923	ENSATEG00000011794	lsg1	100	62.519	Anabas_testudineus
ENSAMEG00000009343	LSG1	95	64.929	ENSACAG00000004222	LSG1	99	64.455	Anolis_carolinensis
ENSAMEG00000009343	LSG1	99	83.005	ENSANAG00000021153	LSG1	99	83.005	Aotus_nancymaae
ENSAMEG00000009343	LSG1	100	62.687	ENSACLG00000000520	lsg1	100	62.874	Astatotilapia_calliptera
ENSAMEG00000009343	LSG1	100	61.947	ENSAMXG00000008271	lsg1	100	62.054	Astyanax_mexicanus
ENSAMEG00000009343	LSG1	99	81.639	ENSBTAG00000008461	LSG1	99	82.701	Bos_taurus
ENSAMEG00000009343	LSG1	61	51.500	WBGene00016907	C53H9.2	88	51.500	Caenorhabditis_elegans
ENSAMEG00000009343	LSG1	99	82.549	ENSCJAG00000013962	LSG1	99	82.549	Callithrix_jacchus
ENSAMEG00000009343	LSG1	95	88.517	ENSCAFG00000013445	LSG1	100	88.517	Canis_familiaris
ENSAMEG00000009343	LSG1	100	87.462	ENSCAFG00020002216	LSG1	100	87.462	Canis_lupus_dingo
ENSAMEG00000009343	LSG1	100	82.424	ENSCHIG00000015769	LSG1	100	82.424	Capra_hircus
ENSAMEG00000009343	LSG1	99	83.005	ENSTSYG00000001447	LSG1	99	83.005	Carlito_syrichta
ENSAMEG00000009343	LSG1	95	75.994	ENSCAPG00000009856	LSG1	99	75.719	Cavia_aperea
ENSAMEG00000009343	LSG1	99	81.639	ENSCCAG00000035744	LSG1	99	81.639	Cebus_capucinus
ENSAMEG00000009343	LSG1	99	82.853	ENSCATG00000042060	LSG1	99	81.791	Cercocebus_atys
ENSAMEG00000009343	LSG1	99	83.005	ENSCSAG00000008796	LSG1	92	83.005	Chlorocebus_sabaeus
ENSAMEG00000009343	LSG1	100	68.421	ENSCPBG00000015941	LSG1	83	68.421	Chrysemys_picta_bellii
ENSAMEG00000009343	LSG1	72	61.538	ENSCING00000007079	-	99	61.538	Ciona_intestinalis
ENSAMEG00000009343	LSG1	76	54.694	ENSCSAVG00000002514	-	97	54.694	Ciona_savignyi
ENSAMEG00000009343	LSG1	99	82.549	ENSCANG00000030709	LSG1	99	82.549	Colobus_angolensis_palliatus
ENSAMEG00000009343	LSG1	99	79.545	ENSCGRG00001019846	Lsg1	99	80.152	Cricetulus_griseus_chok1gshd
ENSAMEG00000009343	LSG1	99	79.545	ENSCGRG00000014617	Lsg1	99	80.152	Cricetulus_griseus_crigri
ENSAMEG00000009343	LSG1	98	63.400	ENSCSEG00000008522	lsg1	99	62.219	Cynoglossus_semilaevis
ENSAMEG00000009343	LSG1	98	64.341	ENSCVAG00000002484	lsg1	100	64.502	Cyprinodon_variegatus
ENSAMEG00000009343	LSG1	100	64.750	ENSDARG00000015352	lsg1	100	64.902	Danio_rerio
ENSAMEG00000009343	LSG1	99	81.571	ENSDNOG00000006224	LSG1	99	81.269	Dasypus_novemcinctus
ENSAMEG00000009343	LSG1	82	58.607	FBgn0266284	Ns3	89	58.607	Drosophila_melanogaster
ENSAMEG00000009343	LSG1	88	84.000	ENSETEG00000003888	LSG1	89	84.000	Echinops_telfairi
ENSAMEG00000009343	LSG1	89	57.025	ENSEBUG00000003119	lsg1	85	56.427	Eptatretus_burgeri
ENSAMEG00000009343	LSG1	99	84.067	ENSEASG00005000678	LSG1	99	84.067	Equus_asinus_asinus
ENSAMEG00000009343	LSG1	99	84.219	ENSECAG00000017659	LSG1	99	84.219	Equus_caballus
ENSAMEG00000009343	LSG1	87	80.342	ENSEEUG00000015217	LSG1	87	80.342	Erinaceus_europaeus
ENSAMEG00000009343	LSG1	100	60.241	ENSELUG00000023973	lsg1	100	60.241	Esox_lucius
ENSAMEG00000009343	LSG1	100	89.242	ENSFCAG00000024957	LSG1	100	89.242	Felis_catus
ENSAMEG00000009343	LSG1	93	65.798	ENSFALG00000007210	LSG1	94	65.798	Ficedula_albicollis
ENSAMEG00000009343	LSG1	99	77.293	ENSFDAG00000017373	LSG1	99	77.293	Fukomys_damarensis
ENSAMEG00000009343	LSG1	97	62.080	ENSFHEG00000003680	lsg1	99	61.699	Fundulus_heteroclitus
ENSAMEG00000009343	LSG1	82	72.269	ENSGMOG00000015834	lsg1	88	70.635	Gadus_morhua
ENSAMEG00000009343	LSG1	99	63.910	ENSGALG00000007058	LSG1	87	64.211	Gallus_gallus
ENSAMEG00000009343	LSG1	97	63.919	ENSGAFG00000015831	lsg1	99	63.198	Gambusia_affinis
ENSAMEG00000009343	LSG1	98	61.280	ENSGACG00000009323	lsg1	100	60.597	Gasterosteus_aculeatus
ENSAMEG00000009343	LSG1	99	83.005	ENSGGOG00000000520	LSG1	99	83.005	Gorilla_gorilla
ENSAMEG00000009343	LSG1	100	63.024	ENSHBUG00000005659	lsg1	100	63.213	Haplochromis_burtoni
ENSAMEG00000009343	LSG1	99	75.113	ENSHGLG00000017390	LSG1	99	74.510	Heterocephalus_glaber_female
ENSAMEG00000009343	LSG1	99	75.113	ENSHGLG00100018587	LSG1	99	74.510	Heterocephalus_glaber_male
ENSAMEG00000009343	LSG1	98	62.654	ENSHCOG00000016848	lsg1	100	61.654	Hippocampus_comes
ENSAMEG00000009343	LSG1	99	62.727	ENSIPUG00000008631	lsg1	99	63.030	Ictalurus_punctatus
ENSAMEG00000009343	LSG1	81	75.100	ENSSTOG00000010234	LSG1	99	76.693	Ictidomys_tridecemlineatus
ENSAMEG00000009343	LSG1	99	79.848	ENSJJAG00000015513	Lsg1	99	79.848	Jaculus_jaculus
ENSAMEG00000009343	LSG1	98	62.442	ENSKMAG00000009681	lsg1	100	62.121	Kryptolebias_marmoratus
ENSAMEG00000009343	LSG1	98	62.154	ENSLBEG00000024261	lsg1	100	61.818	Labrus_bergylta
ENSAMEG00000009343	LSG1	100	64.918	ENSLACG00000013399	LSG1	100	64.414	Latimeria_chalumnae
ENSAMEG00000009343	LSG1	98	65.138	ENSLOCG00000004918	lsg1	99	64.723	Lepisosteus_oculatus
ENSAMEG00000009343	LSG1	99	81.487	ENSLAFG00000012919	-	99	81.487	Loxodonta_africana
ENSAMEG00000009343	LSG1	99	83.156	ENSMFAG00000039903	LSG1	99	82.094	Macaca_fascicularis
ENSAMEG00000009343	LSG1	99	83.156	ENSMMUG00000010708	LSG1	99	83.156	Macaca_mulatta
ENSAMEG00000009343	LSG1	99	82.853	ENSMNEG00000031538	LSG1	99	81.639	Macaca_nemestrina
ENSAMEG00000009343	LSG1	99	83.156	ENSMLEG00000041184	LSG1	99	83.156	Mandrillus_leucophaeus
ENSAMEG00000009343	LSG1	100	62.519	ENSMAMG00000000470	lsg1	100	62.219	Mastacembelus_armatus
ENSAMEG00000009343	LSG1	100	63.174	ENSMZEG00005017865	lsg1	100	63.363	Maylandia_zebra
ENSAMEG00000009343	LSG1	89	65.476	ENSMGAG00000007050	LSG1	99	65.816	Meleagris_gallopavo
ENSAMEG00000009343	LSG1	91	78.146	ENSMAUG00000016976	Lsg1	93	78.808	Mesocricetus_auratus
ENSAMEG00000009343	LSG1	99	81.032	ENSMICG00000049087	LSG1	99	81.032	Microcebus_murinus
ENSAMEG00000009343	LSG1	99	78.097	ENSMOCG00000022136	Lsg1	99	78.582	Microtus_ochrogaster
ENSAMEG00000009343	LSG1	82	72.083	ENSMMOG00000008884	lsg1	98	70.751	Mola_mola
ENSAMEG00000009343	LSG1	99	58.471	ENSMODG00000019828	LSG1	99	57.808	Monodelphis_domestica
ENSAMEG00000009343	LSG1	100	78.030	MGP_CAROLIEiJ_G0020648	Lsg1	100	78.030	Mus_caroli
ENSAMEG00000009343	LSG1	100	78.939	ENSMUSG00000022538	Lsg1	100	78.939	Mus_musculus
ENSAMEG00000009343	LSG1	98	79.692	MGP_PahariEiJ_G0016352	Lsg1	100	79.576	Mus_pahari
ENSAMEG00000009343	LSG1	100	78.636	MGP_SPRETEiJ_G0021544	Lsg1	100	78.636	Mus_spretus
ENSAMEG00000009343	LSG1	100	90.455	ENSMPUG00000003734	LSG1	100	90.455	Mustela_putorius_furo
ENSAMEG00000009343	LSG1	100	84.545	ENSMLUG00000012548	LSG1	100	84.545	Myotis_lucifugus
ENSAMEG00000009343	LSG1	99	78.756	ENSNGAG00000021872	Lsg1	99	78.030	Nannospalax_galili
ENSAMEG00000009343	LSG1	99	83.156	ENSNLEG00000008293	LSG1	99	83.156	Nomascus_leucogenys
ENSAMEG00000009343	LSG1	69	70.103	ENSMEUG00000009041	-	82	70.103	Notamacropus_eugenii
ENSAMEG00000009343	LSG1	100	62.836	ENSONIG00000002635	lsg1	100	63.284	Oreochromis_niloticus
ENSAMEG00000009343	LSG1	95	70.111	ENSOANG00000012742	LSG1	99	68.998	Ornithorhynchus_anatinus
ENSAMEG00000009343	LSG1	99	82.094	ENSOCUG00000004817	LSG1	99	82.094	Oryctolagus_cuniculus
ENSAMEG00000009343	LSG1	98	62.346	ENSORLG00000007695	lsg1	100	62.330	Oryzias_latipes
ENSAMEG00000009343	LSG1	98	61.868	ENSORLG00020016286	lsg1	100	61.712	Oryzias_latipes_hni
ENSAMEG00000009343	LSG1	98	62.229	ENSORLG00015012025	lsg1	100	61.898	Oryzias_latipes_hsok
ENSAMEG00000009343	LSG1	98	61.515	ENSOMEG00000022379	lsg1	100	60.758	Oryzias_melastigma
ENSAMEG00000009343	LSG1	99	83.233	ENSOGAG00000003475	LSG1	99	83.233	Otolemur_garnettii
ENSAMEG00000009343	LSG1	100	83.030	ENSOARG00000020403	LSG1	100	83.030	Ovis_aries
ENSAMEG00000009343	LSG1	99	82.853	ENSPPAG00000029271	LSG1	99	82.853	Pan_paniscus
ENSAMEG00000009343	LSG1	100	88.589	ENSPPRG00000010281	LSG1	100	88.589	Panthera_pardus
ENSAMEG00000009343	LSG1	100	89.091	ENSPTIG00000010789	LSG1	100	89.091	Panthera_tigris_altaica
ENSAMEG00000009343	LSG1	99	82.701	ENSPTRG00000015760	LSG1	99	82.701	Pan_troglodytes
ENSAMEG00000009343	LSG1	99	83.005	ENSPANG00000018249	LSG1	99	81.942	Papio_anubis
ENSAMEG00000009343	LSG1	97	62.906	ENSPKIG00000002895	lsg1	99	62.801	Paramormyrops_kingsleyae
ENSAMEG00000009343	LSG1	96	64.697	ENSPSIG00000009821	LSG1	100	64.075	Pelodiscus_sinensis
ENSAMEG00000009343	LSG1	95	63.333	ENSPMGG00000000931	lsg1	100	63.333	Periophthalmus_magnuspinnatus
ENSAMEG00000009343	LSG1	99	79.909	ENSPEMG00000012082	-	99	79.607	Peromyscus_maniculatus_bairdii
ENSAMEG00000009343	LSG1	99	57.081	ENSPMAG00000007451	lsg1	99	57.755	Petromyzon_marinus
ENSAMEG00000009343	LSG1	100	63.547	ENSPCIG00000013890	LSG1	83	63.547	Phascolarctos_cinereus
ENSAMEG00000009343	LSG1	97	65.062	ENSPFOG00000021882	lsg1	99	63.205	Poecilia_formosa
ENSAMEG00000009343	LSG1	97	64.441	ENSPLAG00000019536	lsg1	99	62.760	Poecilia_latipinna
ENSAMEG00000009343	LSG1	97	64.241	ENSPMEG00000017281	lsg1	99	62.426	Poecilia_mexicana
ENSAMEG00000009343	LSG1	97	54.394	ENSPREG00000006048	lsg1	99	53.461	Poecilia_reticulata
ENSAMEG00000009343	LSG1	92	81.117	ENSPPYG00000014425	LSG1	100	81.117	Pongo_abelii
ENSAMEG00000009343	LSG1	90	82.667	ENSPCAG00000005511	LSG1	90	82.667	Procavia_capensis
ENSAMEG00000009343	LSG1	99	82.701	ENSPCOG00000012360	LSG1	99	82.701	Propithecus_coquereli
ENSAMEG00000009343	LSG1	100	62.537	ENSPNYG00000021994	lsg1	100	62.725	Pundamilia_nyererei
ENSAMEG00000009343	LSG1	99	64.768	ENSPNAG00000015533	lsg1	99	64.511	Pygocentrus_nattereri
ENSAMEG00000009343	LSG1	100	78.614	ENSRNOG00000001727	Lsg1	100	78.614	Rattus_norvegicus
ENSAMEG00000009343	LSG1	99	81.639	ENSRBIG00000029053	LSG1	99	81.639	Rhinopithecus_bieti
ENSAMEG00000009343	LSG1	99	81.639	ENSRROG00000037702	LSG1	99	81.639	Rhinopithecus_roxellana
ENSAMEG00000009343	LSG1	64	56.548	YGL099W	LSG1	67	56.548	Saccharomyces_cerevisiae
ENSAMEG00000009343	LSG1	99	83.005	ENSSBOG00000034938	LSG1	99	83.005	Saimiri_boliviensis_boliviensis
ENSAMEG00000009343	LSG1	78	64.583	ENSSHAG00000003487	LSG1	100	63.227	Sarcophilus_harrisii
ENSAMEG00000009343	LSG1	98	63.359	ENSSFOG00015008955	lsg1	100	62.725	Scleropages_formosus
ENSAMEG00000009343	LSG1	98	63.761	ENSSDUG00000004622	lsg1	100	63.268	Seriola_dumerili
ENSAMEG00000009343	LSG1	98	62.980	ENSSLDG00000010869	lsg1	100	62.879	Seriola_lalandi_dorsalis
ENSAMEG00000009343	LSG1	81	81.924	ENSSARG00000012981	LSG1	81	81.924	Sorex_araneus
ENSAMEG00000009343	LSG1	100	67.905	ENSSPUG00000016347	LSG1	100	67.756	Sphenodon_punctatus
ENSAMEG00000009343	LSG1	84	69.767	ENSSPAG00000005508	lsg1	100	61.991	Stegastes_partitus
ENSAMEG00000009343	LSG1	100	81.818	ENSSSCG00000011827	LSG1	100	81.818	Sus_scrofa
ENSAMEG00000009343	LSG1	89	64.489	ENSTGUG00000009068	LSG1	100	64.489	Taeniopygia_guttata
ENSAMEG00000009343	LSG1	98	59.630	ENSTRUG00000017380	lsg1	100	60.150	Takifugu_rubripes
ENSAMEG00000009343	LSG1	98	63.077	ENSTNIG00000015570	lsg1	100	62.913	Tetraodon_nigroviridis
ENSAMEG00000009343	LSG1	100	75.189	ENSTTRG00000000559	LSG1	100	75.189	Tursiops_truncatus
ENSAMEG00000009343	LSG1	100	96.970	ENSUAMG00000012454	LSG1	100	96.970	Ursus_americanus
ENSAMEG00000009343	LSG1	100	96.970	ENSUMAG00000000855	LSG1	100	96.970	Ursus_maritimus
ENSAMEG00000009343	LSG1	95	78.788	ENSVPAG00000012400	LSG1	100	78.788	Vicugna_pacos
ENSAMEG00000009343	LSG1	95	87.879	ENSVVUG00000008956	LSG1	97	87.879	Vulpes_vulpes
ENSAMEG00000009343	LSG1	99	64.521	ENSXETG00000003451	lsg1	99	63.852	Xenopus_tropicalis
ENSAMEG00000009343	LSG1	97	63.247	ENSXCOG00000003239	lsg1	99	63.528	Xiphophorus_couchianus
ENSAMEG00000009343	LSG1	97	62.481	ENSXMAG00000005536	lsg1	99	62.629	Xiphophorus_maculatus