EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000009496 (Gene tree)
Gene ID: 100479332
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 140847 bases
Position: chrGL192598.1:1011376-1152222
Accession: 100479332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000009988	ResIII	PF04851.15	5.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000010424	CHD6-201	8151	-	ENSAMEP00000009988	2717 (aa)	XP_011222288	G1LSE8

Gene Model

Click here to download ENSAMEG00000009496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000009496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000009496	CHD6	57	63.281	ENSAMEG00000006307	CHD8	60	63.346
ENSAMEG00000009496	CHD6	73	69.039	ENSAMEG00000005699	CHD7	71	65.860
ENSAMEG00000009496	CHD6	78	63.570	ENSAMEG00000016232	CHD9	71	63.570

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000009496	CHD6	100	91.584	ENSG00000124177	CHD6	99	99.660	Homo_sapiens
ENSAMEG00000009496	CHD6	75	75.545	ENSAPOG00000013736	chd6	64	75.711	Acanthochromis_polyacanthus
ENSAMEG00000009496	CHD6	74	76.222	ENSATEG00000005608	chd6	63	76.356	Anabas_testudineus
ENSAMEG00000009496	CHD6	99	71.867	ENSAPLG00000015592	CHD6	100	72.578	Anas_platyrhynchos
ENSAMEG00000009496	CHD6	91	75.292	ENSACAG00000006842	CHD6	90	76.444	Anolis_carolinensis
ENSAMEG00000009496	CHD6	100	91.363	ENSANAG00000037548	CHD6	99	93.394	Aotus_nancymaae
ENSAMEG00000009496	CHD6	79	71.231	ENSAMXG00000009576	chd6	77	69.976	Astyanax_mexicanus
ENSAMEG00000009496	CHD6	100	89.783	ENSBTAG00000005733	CHD6	100	89.783	Bos_taurus
ENSAMEG00000009496	CHD6	100	91.216	ENSCJAG00000017920	CHD6	99	93.211	Callithrix_jacchus
ENSAMEG00000009496	CHD6	100	96.283	ENSCAFG00000009236	CHD6	100	96.283	Canis_familiaris
ENSAMEG00000009496	CHD6	99	95.602	ENSCAFG00020012906	CHD6	99	98.616	Canis_lupus_dingo
ENSAMEG00000009496	CHD6	100	89.820	ENSCHIG00000017606	CHD6	100	89.820	Capra_hircus
ENSAMEG00000009496	CHD6	84	90.491	ENSTSYG00000014635	CHD6	100	90.491	Carlito_syrichta
ENSAMEG00000009496	CHD6	100	90.291	ENSCPOG00000015641	CHD6	100	90.291	Cavia_porcellus
ENSAMEG00000009496	CHD6	100	91.621	ENSCCAG00000036828	CHD6	99	93.394	Cebus_capucinus
ENSAMEG00000009496	CHD6	100	91.143	ENSCATG00000039248	CHD6	99	93.394	Cercocebus_atys
ENSAMEG00000009496	CHD6	100	90.312	ENSCLAG00000013743	CHD6	100	90.312	Chinchilla_lanigera
ENSAMEG00000009496	CHD6	100	91.474	ENSCSAG00000013997	CHD6	100	91.474	Chlorocebus_sabaeus
ENSAMEG00000009496	CHD6	91	90.250	ENSCHOG00000012647	CHD6	95	90.250	Choloepus_hoffmanni
ENSAMEG00000009496	CHD6	99	73.744	ENSCPBG00000019382	CHD6	99	73.854	Chrysemys_picta_bellii
ENSAMEG00000009496	CHD6	100	91.510	ENSCANG00000043435	CHD6	99	93.394	Colobus_angolensis_palliatus
ENSAMEG00000009496	CHD6	100	89.150	ENSCGRG00001002694	Chd6	100	89.187	Cricetulus_griseus_chok1gshd
ENSAMEG00000009496	CHD6	84	72.482	ENSDARG00000017244	chd6	81	72.482	Danio_rerio
ENSAMEG00000009496	CHD6	99	90.262	ENSDNOG00000004176	CHD6	99	90.262	Dasypus_novemcinctus
ENSAMEG00000009496	CHD6	99	92.910	ENSEASG00005023433	CHD6	95	97.683	Equus_asinus_asinus
ENSAMEG00000009496	CHD6	99	93.633	ENSECAG00000011761	CHD6	100	93.633	Equus_caballus
ENSAMEG00000009496	CHD6	65	79.908	ENSELUG00000012309	chd6	92	79.908	Esox_lucius
ENSAMEG00000009496	CHD6	100	95.215	ENSFCAG00000003572	CHD6	100	95.215	Felis_catus
ENSAMEG00000009496	CHD6	99	70.850	ENSFALG00000012563	CHD6	98	71.248	Ficedula_albicollis
ENSAMEG00000009496	CHD6	99	90.406	ENSFDAG00000013791	CHD6	99	90.406	Fukomys_damarensis
ENSAMEG00000009496	CHD6	73	69.264	ENSGMOG00000011715	chd6	85	69.407	Gadus_morhua
ENSAMEG00000009496	CHD6	79	70.515	ENSGACG00000000037	chd6	93	64.786	Gasterosteus_aculeatus
ENSAMEG00000009496	CHD6	100	91.584	ENSGGOG00000013123	CHD6	99	93.394	Gorilla_gorilla
ENSAMEG00000009496	CHD6	77	72.659	ENSHBUG00000014701	chd6	66	71.988	Haplochromis_burtoni
ENSAMEG00000009496	CHD6	100	90.551	ENSHGLG00000004548	CHD6	100	90.588	Heterocephalus_glaber_female
ENSAMEG00000009496	CHD6	100	90.551	ENSHGLG00100006401	CHD6	100	90.588	Heterocephalus_glaber_male
ENSAMEG00000009496	CHD6	76	77.921	ENSIPUG00000003692	chd6	74	76.845	Ictalurus_punctatus
ENSAMEG00000009496	CHD6	100	91.063	ENSSTOG00000013382	CHD6	100	91.063	Ictidomys_tridecemlineatus
ENSAMEG00000009496	CHD6	88	76.190	ENSLACG00000010881	CHD6	90	76.248	Latimeria_chalumnae
ENSAMEG00000009496	CHD6	72	80.312	ENSLOCG00000007386	chd6	88	75.770	Lepisosteus_oculatus
ENSAMEG00000009496	CHD6	100	91.324	ENSLAFG00000012144	CHD6	100	91.324	Loxodonta_africana
ENSAMEG00000009496	CHD6	100	91.547	ENSMFAG00000032830	CHD6	99	93.394	Macaca_fascicularis
ENSAMEG00000009496	CHD6	100	91.547	ENSMMUG00000020458	CHD6	99	93.394	Macaca_mulatta
ENSAMEG00000009496	CHD6	100	91.547	ENSMNEG00000040847	CHD6	99	93.394	Macaca_nemestrina
ENSAMEG00000009496	CHD6	100	91.223	ENSMLEG00000031965	CHD6	99	93.394	Mandrillus_leucophaeus
ENSAMEG00000009496	CHD6	78	70.078	ENSMAMG00000013111	chd6	69	69.905	Mastacembelus_armatus
ENSAMEG00000009496	CHD6	99	71.637	ENSMGAG00000001121	CHD6	100	72.257	Meleagris_gallopavo
ENSAMEG00000009496	CHD6	100	91.535	ENSMICG00000016641	CHD6	99	92.661	Microcebus_murinus
ENSAMEG00000009496	CHD6	89	80.958	ENSMODG00000000720	-	99	80.958	Monodelphis_domestica
ENSAMEG00000009496	CHD6	100	87.459	MGP_CAROLIEiJ_G0024604	Chd6	100	94.346	Mus_caroli
ENSAMEG00000009496	CHD6	100	87.532	ENSMUSG00000057133	Chd6	100	94.262	Mus_musculus
ENSAMEG00000009496	CHD6	100	87.312	MGP_PahariEiJ_G0026048	Chd6	100	94.684	Mus_pahari
ENSAMEG00000009496	CHD6	100	87.422	MGP_SPRETEiJ_G0025526	Chd6	100	94.346	Mus_spretus
ENSAMEG00000009496	CHD6	100	95.558	ENSMPUG00000017695	CHD6	100	95.558	Mustela_putorius_furo
ENSAMEG00000009496	CHD6	100	92.571	ENSMLUG00000016247	CHD6	100	92.571	Myotis_lucifugus
ENSAMEG00000009496	CHD6	78	73.433	ENSNBRG00000013839	chd6	79	73.221	Neolamprologus_brichardi
ENSAMEG00000009496	CHD6	100	89.827	ENSNLEG00000006496	CHD6	100	89.938	Nomascus_leucogenys
ENSAMEG00000009496	CHD6	100	86.944	ENSOPRG00000013376	-	100	86.944	Ochotona_princeps
ENSAMEG00000009496	CHD6	84	75.000	ENSONIG00000000393	chd6	88	75.000	Oreochromis_niloticus
ENSAMEG00000009496	CHD6	100	70.627	ENSOANG00000014347	CHD6	99	70.901	Ornithorhynchus_anatinus
ENSAMEG00000009496	CHD6	99	89.695	ENSOCUG00000012394	CHD6	100	89.695	Oryctolagus_cuniculus
ENSAMEG00000009496	CHD6	80	71.644	ENSORLG00020021891	chd6	95	86.172	Oryzias_latipes_hni
ENSAMEG00000009496	CHD6	99	90.048	ENSOGAG00000002427	CHD6	99	89.948	Otolemur_garnettii
ENSAMEG00000009496	CHD6	99	87.459	ENSOARG00000002597	CHD6	100	87.459	Ovis_aries
ENSAMEG00000009496	CHD6	100	95.326	ENSPPRG00000014756	CHD6	100	95.326	Panthera_pardus
ENSAMEG00000009496	CHD6	100	95.215	ENSPTIG00000011094	CHD6	100	95.215	Panthera_tigris_altaica
ENSAMEG00000009496	CHD6	100	91.657	ENSPTRG00000013504	CHD6	99	93.394	Pan_troglodytes
ENSAMEG00000009496	CHD6	100	91.510	ENSPANG00000025554	CHD6	99	93.211	Papio_anubis
ENSAMEG00000009496	CHD6	77	76.800	ENSPKIG00000005578	chd6	79	73.019	Paramormyrops_kingsleyae
ENSAMEG00000009496	CHD6	76	76.420	ENSPMGG00000014877	chd6	84	75.413	Periophthalmus_magnuspinnatus
ENSAMEG00000009496	CHD6	100	80.550	ENSPCIG00000028037	CHD6	100	80.550	Phascolarctos_cinereus
ENSAMEG00000009496	CHD6	78	71.713	ENSPLAG00000003128	chd6	65	71.212	Poecilia_latipinna
ENSAMEG00000009496	CHD6	74	71.616	ENSPREG00000022653	chd6	99	86.630	Poecilia_reticulata
ENSAMEG00000009496	CHD6	100	91.771	ENSPPYG00000011016	CHD6	100	91.771	Pongo_abelii
ENSAMEG00000009496	CHD6	99	91.863	ENSPCOG00000001089	CHD6	99	93.211	Propithecus_coquereli
ENSAMEG00000009496	CHD6	78	75.081	ENSPNYG00000022516	chd6	78	74.984	Pundamilia_nyererei
ENSAMEG00000009496	CHD6	79	73.455	ENSPNAG00000012825	chd6	76	74.742	Pygocentrus_nattereri
ENSAMEG00000009496	CHD6	100	86.797	ENSRNOG00000016744	Chd6	100	86.723	Rattus_norvegicus
ENSAMEG00000009496	CHD6	100	91.437	ENSSBOG00000022089	CHD6	99	93.394	Saimiri_boliviensis_boliviensis
ENSAMEG00000009496	CHD6	99	80.198	ENSSHAG00000017072	CHD6	99	80.198	Sarcophilus_harrisii
ENSAMEG00000009496	CHD6	80	75.977	ENSSFOG00015012920	chd6	81	72.766	Scleropages_formosus
ENSAMEG00000009496	CHD6	59	100.000	ENSSARG00000002615	-	61	100.000	Sorex_araneus
ENSAMEG00000009496	CHD6	100	91.946	ENSSSCG00000007360	CHD6	100	92.573	Sus_scrofa
ENSAMEG00000009496	CHD6	97	73.424	ENSTGUG00000003179	CHD6	99	73.766	Taeniopygia_guttata
ENSAMEG00000009496	CHD6	51	77.373	ENSTNIG00000017487	chd6	57	77.373	Tetraodon_nigroviridis
ENSAMEG00000009496	CHD6	100	89.085	ENSTTRG00000013438	CHD6	100	89.085	Tursiops_truncatus
ENSAMEG00000009496	CHD6	99	97.378	ENSUAMG00000024036	CHD6	99	97.378	Ursus_americanus
ENSAMEG00000009496	CHD6	99	98.818	ENSUMAG00000002017	CHD6	99	98.818	Ursus_maritimus
ENSAMEG00000009496	CHD6	92	90.623	ENSVPAG00000007941	CHD6	93	90.623	Vicugna_pacos
ENSAMEG00000009496	CHD6	100	96.393	ENSVVUG00000029164	CHD6	100	96.393	Vulpes_vulpes
ENSAMEG00000009496	CHD6	99	61.073	ENSXETG00000021445	chd6	99	60.950	Xenopus_tropicalis