EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000009508 (Gene tree)
Gene ID: 100466125
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 10041 bases
Position: chrGL194442.1:188070-198110
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000009997	ResIII	PF04851.15	9.4e-08	1	1
ENSAMEP00000010002	ResIII	PF04851.15	1e-05	1	1
ENSAMEP00000009997	DEAD	PF00270.29	4.9e-39	1	1
ENSAMEP00000010002	DEAD	PF00270.29	3.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000010439	DDX39B-202	1320	-	ENSAMEP00000010002	440 (aa)	-	G1LSG2
ENSAMET00000010434	DDX39B-201	1290	-	ENSAMEP00000009997	429 (aa)	-	G1LSF7

Gene Model

Click here to download ENSAMEG00000009508's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03013	RNA transport	KEGG
aml03015	mRNA surveillance pathway	KEGG
aml03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000009508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000009508	DDX39B	88	33.161	ENSAMEG00000001987	DDX19A	80	33.161
ENSAMEG00000009508	DDX39B	86	38.108	ENSAMEG00000015194	EIF4A3	90	38.108
ENSAMEG00000009508	DDX39B	81	35.159	ENSAMEG00000010740	DDX47	75	35.159
ENSAMEG00000009508	DDX39B	88	31.486	ENSAMEG00000011566	DDX49	78	32.283
ENSAMEG00000009508	DDX39B	99	34.033	ENSAMEG00000006073	DDX6	88	34.033
ENSAMEG00000009508	DDX39B	86	38.919	ENSAMEG00000000966	EIF4A2	90	38.919
ENSAMEG00000009508	DDX39B	92	36.802	ENSAMEG00000016753	EIF4A1	95	36.802
ENSAMEG00000009508	DDX39B	77	30.029	ENSAMEG00000002685	DDX5	50	30.029
ENSAMEG00000009508	DDX39B	100	91.375	ENSAMEG00000013379	DDX39A	98	91.375
ENSAMEG00000009508	DDX39B	86	30.526	ENSAMEG00000000138	DDX25	82	30.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000009508	DDX39B	99	99.766	ENSG00000198563	DDX39B	100	99.766	Homo_sapiens
ENSAMEG00000009508	DDX39B	99	93.443	ENSACIG00000004534	ddx39b	98	93.443	Amphilophus_citrinellus
ENSAMEG00000009508	DDX39B	99	93.056	ENSATEG00000012366	ddx39b	100	93.056	Anabas_testudineus
ENSAMEG00000009508	DDX39B	99	96.970	ENSACAG00000012240	DDX39B	100	96.970	Anolis_carolinensis
ENSAMEG00000009508	DDX39B	99	99.766	ENSANAG00000030372	DDX39B	100	99.766	Aotus_nancymaae
ENSAMEG00000009508	DDX39B	99	90.553	ENSACLG00000018759	ddx39b	99	90.553	Astatotilapia_calliptera
ENSAMEG00000009508	DDX39B	99	92.661	ENSAMXG00000017837	ddx39b	100	92.661	Astyanax_mexicanus
ENSAMEG00000009508	DDX39B	99	99.533	ENSBTAG00000014490	DDX39B	100	99.533	Bos_taurus
ENSAMEG00000009508	DDX39B	99	99.766	ENSCJAG00000003152	DDX39B	100	99.766	Callithrix_jacchus
ENSAMEG00000009508	DDX39B	99	99.766	ENSCAFG00000000509	DDX39B	100	100.000	Canis_familiaris
ENSAMEG00000009508	DDX39B	99	99.766	ENSCAFG00020020530	DDX39B	100	99.766	Canis_lupus_dingo
ENSAMEG00000009508	DDX39B	99	99.533	ENSCHIG00000004579	DDX39B	100	99.533	Capra_hircus
ENSAMEG00000009508	DDX39B	100	85.082	ENSTSYG00000029741	-	91	87.619	Carlito_syrichta
ENSAMEG00000009508	DDX39B	99	99.766	ENSTSYG00000010226	-	100	99.766	Carlito_syrichta
ENSAMEG00000009508	DDX39B	99	99.533	ENSCAPG00000010066	DDX39B	100	99.533	Cavia_aperea
ENSAMEG00000009508	DDX39B	99	99.533	ENSCPOG00000002335	DDX39B	100	99.533	Cavia_porcellus
ENSAMEG00000009508	DDX39B	99	99.766	ENSCCAG00000027897	DDX39B	100	99.766	Cebus_capucinus
ENSAMEG00000009508	DDX39B	99	90.118	ENSCATG00000043709	DDX39B	99	90.118	Cercocebus_atys
ENSAMEG00000009508	DDX39B	99	99.533	ENSCLAG00000014555	DDX39B	100	99.533	Chinchilla_lanigera
ENSAMEG00000009508	DDX39B	99	99.529	ENSCSAG00000008517	DDX39B	100	99.529	Chlorocebus_sabaeus
ENSAMEG00000009508	DDX39B	64	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSAMEG00000009508	DDX39B	99	99.766	ENSCANG00000041217	DDX39B	100	99.766	Colobus_angolensis_palliatus
ENSAMEG00000009508	DDX39B	83	84.358	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSAMEG00000009508	DDX39B	57	98.776	ENSCGRG00001017315	-	95	98.544	Cricetulus_griseus_chok1gshd
ENSAMEG00000009508	DDX39B	50	91.364	ENSCGRG00000000078	-	90	98.049	Cricetulus_griseus_crigri
ENSAMEG00000009508	DDX39B	57	98.776	ENSCGRG00000012479	-	76	98.776	Cricetulus_griseus_crigri
ENSAMEG00000009508	DDX39B	99	92.414	ENSDARG00000036069	ddx39b	100	92.644	Danio_rerio
ENSAMEG00000009508	DDX39B	99	99.766	ENSDNOG00000010215	DDX39B	100	99.766	Dasypus_novemcinctus
ENSAMEG00000009508	DDX39B	87	100.000	ENSDORG00000004985	Ddx39b	100	100.000	Dipodomys_ordii
ENSAMEG00000009508	DDX39B	87	86.631	ENSETEG00000009649	DDX39B	87	86.631	Echinops_telfairi
ENSAMEG00000009508	DDX39B	99	99.766	ENSEASG00005017156	DDX39B	100	99.766	Equus_asinus_asinus
ENSAMEG00000009508	DDX39B	99	99.766	ENSECAG00000007750	DDX39B	100	99.766	Equus_caballus
ENSAMEG00000009508	DDX39B	99	92.723	ENSELUG00000017904	ddx39b	100	92.575	Esox_lucius
ENSAMEG00000009508	DDX39B	99	100.000	ENSFCAG00000004497	DDX39B	100	100.000	Felis_catus
ENSAMEG00000009508	DDX39B	99	99.533	ENSFDAG00000011074	DDX39B	100	99.533	Fukomys_damarensis
ENSAMEG00000009508	DDX39B	74	99.684	ENSGAGG00000001300	-	80	99.684	Gopherus_agassizii
ENSAMEG00000009508	DDX39B	99	99.766	ENSGGOG00000005989	DDX39B	100	99.766	Gorilla_gorilla
ENSAMEG00000009508	DDX39B	50	81.696	ENSHBUG00000022054	-	77	87.560	Haplochromis_burtoni
ENSAMEG00000009508	DDX39B	99	99.065	ENSHGLG00000019248	DDX39B	100	99.065	Heterocephalus_glaber_female
ENSAMEG00000009508	DDX39B	99	99.065	ENSHGLG00100011850	DDX39B	100	99.065	Heterocephalus_glaber_male
ENSAMEG00000009508	DDX39B	100	91.304	ENSIPUG00000015733	DDX39B	94	91.762	Ictalurus_punctatus
ENSAMEG00000009508	DDX39B	99	99.299	ENSSTOG00000012838	DDX39B	100	99.299	Ictidomys_tridecemlineatus
ENSAMEG00000009508	DDX39B	99	99.065	ENSJJAG00000005660	-	100	99.065	Jaculus_jaculus
ENSAMEG00000009508	DDX39B	99	78.487	ENSLBEG00000012254	ddx39b	99	78.487	Labrus_bergylta
ENSAMEG00000009508	DDX39B	66	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSAMEG00000009508	DDX39B	99	89.631	ENSLACG00000002110	DDX39B	100	89.631	Latimeria_chalumnae
ENSAMEG00000009508	DDX39B	99	99.533	ENSLAFG00000014202	DDX39B	100	99.533	Loxodonta_africana
ENSAMEG00000009508	DDX39B	99	99.766	ENSMFAG00000034233	DDX39B	100	99.766	Macaca_fascicularis
ENSAMEG00000009508	DDX39B	99	99.766	ENSMMUG00000008839	DDX39B	100	99.766	Macaca_mulatta
ENSAMEG00000009508	DDX39B	99	99.766	ENSMNEG00000041059	DDX39B	100	99.766	Macaca_nemestrina
ENSAMEG00000009508	DDX39B	99	99.766	ENSMLEG00000043791	DDX39B	100	99.766	Mandrillus_leucophaeus
ENSAMEG00000009508	DDX39B	99	90.553	ENSMZEG00005017654	ddx39b	99	90.553	Maylandia_zebra
ENSAMEG00000009508	DDX39B	99	99.065	ENSMAUG00000008059	Ddx39b	100	99.065	Mesocricetus_auratus
ENSAMEG00000009508	DDX39B	99	99.766	ENSMICG00000017349	DDX39B	100	99.766	Microcebus_murinus
ENSAMEG00000009508	DDX39B	99	99.299	ENSMOCG00000011169	Ddx39b	100	99.299	Microtus_ochrogaster
ENSAMEG00000009508	DDX39B	88	99.468	ENSMODG00000015791	DDX39B	88	99.468	Monodelphis_domestica
ENSAMEG00000009508	DDX39B	99	99.299	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSAMEG00000009508	DDX39B	99	99.299	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSAMEG00000009508	DDX39B	99	99.299	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.299	Mus_spretus
ENSAMEG00000009508	DDX39B	99	100.000	ENSMPUG00000011407	DDX39B	100	100.000	Mustela_putorius_furo
ENSAMEG00000009508	DDX39B	72	100.000	ENSMLUG00000001681	DDX39B	100	100.000	Myotis_lucifugus
ENSAMEG00000009508	DDX39B	99	99.766	ENSNGAG00000022948	Ddx39b	100	99.766	Nannospalax_galili
ENSAMEG00000009508	DDX39B	80	99.291	ENSNLEG00000006094	DDX39B	99	99.291	Nomascus_leucogenys
ENSAMEG00000009508	DDX39B	86	99.543	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSAMEG00000009508	DDX39B	99	100.000	ENSOPRG00000011923	DDX39B	100	100.000	Ochotona_princeps
ENSAMEG00000009508	DDX39B	99	99.299	ENSODEG00000018083	DDX39B	100	99.299	Octodon_degus
ENSAMEG00000009508	DDX39B	99	91.667	ENSONIG00000004740	ddx39b	100	91.667	Oreochromis_niloticus
ENSAMEG00000009508	DDX39B	55	98.734	ENSOANG00000008361	DDX39B	95	98.734	Ornithorhynchus_anatinus
ENSAMEG00000009508	DDX39B	100	98.182	ENSOCUG00000024126	DDX39B	99	98.182	Oryctolagus_cuniculus
ENSAMEG00000009508	DDX39B	84	92.722	ENSOGAG00000009067	-	100	98.457	Otolemur_garnettii
ENSAMEG00000009508	DDX39B	99	98.834	ENSOGAG00000028850	-	100	98.834	Otolemur_garnettii
ENSAMEG00000009508	DDX39B	100	99.534	ENSOARG00000008787	DDX39B	98	99.534	Ovis_aries
ENSAMEG00000009508	DDX39B	99	99.766	ENSPPAG00000043072	DDX39B	100	99.766	Pan_paniscus
ENSAMEG00000009508	DDX39B	99	100.000	ENSPPRG00000001913	DDX39B	100	100.000	Panthera_pardus
ENSAMEG00000009508	DDX39B	99	99.065	ENSPTIG00000017669	DDX39B	100	99.065	Panthera_tigris_altaica
ENSAMEG00000009508	DDX39B	99	99.766	ENSPTRG00000032509	DDX39B	100	99.766	Pan_troglodytes
ENSAMEG00000009508	DDX39B	99	99.766	ENSPANG00000018609	DDX39B	100	99.766	Papio_anubis
ENSAMEG00000009508	DDX39B	99	91.076	ENSPKIG00000011324	ddx39b	100	91.533	Paramormyrops_kingsleyae
ENSAMEG00000009508	DDX39B	99	99.065	ENSPEMG00000016905	Ddx39b	100	99.065	Peromyscus_maniculatus_bairdii
ENSAMEG00000009508	DDX39B	99	99.766	ENSPCIG00000017572	DDX39B	100	99.766	Phascolarctos_cinereus
ENSAMEG00000009508	DDX39B	99	99.766	ENSPPYG00000016433	DDX39B	100	99.766	Pongo_abelii
ENSAMEG00000009508	DDX39B	66	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSAMEG00000009508	DDX39B	99	99.766	ENSPCOG00000018656	DDX39B	100	99.766	Propithecus_coquereli
ENSAMEG00000009508	DDX39B	99	99.299	ENSPVAG00000004653	DDX39B	100	99.299	Pteropus_vampyrus
ENSAMEG00000009508	DDX39B	99	82.670	ENSPNYG00000010382	ddx39b	98	82.670	Pundamilia_nyererei
ENSAMEG00000009508	DDX39B	99	92.431	ENSPNAG00000026926	ddx39b	100	92.431	Pygocentrus_nattereri
ENSAMEG00000009508	DDX39B	99	99.299	ENSRNOG00000000841	Ddx39b	100	99.299	Rattus_norvegicus
ENSAMEG00000009508	DDX39B	99	89.486	ENSRBIG00000031309	DDX39B	100	89.486	Rhinopithecus_bieti
ENSAMEG00000009508	DDX39B	99	99.766	ENSRROG00000039517	DDX39B	100	99.766	Rhinopithecus_roxellana
ENSAMEG00000009508	DDX39B	99	89.486	ENSSBOG00000035513	-	100	89.486	Saimiri_boliviensis_boliviensis
ENSAMEG00000009508	DDX39B	99	99.766	ENSSHAG00000003209	DDX39B	100	99.766	Sarcophilus_harrisii
ENSAMEG00000009508	DDX39B	99	90.847	ENSSFOG00015016107	ddx39b	100	91.533	Scleropages_formosus
ENSAMEG00000009508	DDX39B	99	93.519	ENSSDUG00000011557	ddx39b	100	93.750	Seriola_dumerili
ENSAMEG00000009508	DDX39B	99	93.287	ENSSLDG00000015763	ddx39b	100	93.519	Seriola_lalandi_dorsalis
ENSAMEG00000009508	DDX39B	87	87.968	ENSSARG00000005245	DDX39B	100	87.968	Sorex_araneus
ENSAMEG00000009508	DDX39B	99	97.664	ENSSPUG00000012805	DDX39B	100	97.664	Sphenodon_punctatus
ENSAMEG00000009508	DDX39B	100	99.767	ENSSSCG00000001400	DDX39B	100	100.000	Sus_scrofa
ENSAMEG00000009508	DDX39B	99	76.636	ENSTBEG00000003721	DDX39B	100	76.636	Tupaia_belangeri
ENSAMEG00000009508	DDX39B	99	91.224	ENSTTRG00000014074	DDX39B	100	91.224	Tursiops_truncatus
ENSAMEG00000009508	DDX39B	99	87.209	ENSUAMG00000027335	DDX39B	100	87.209	Ursus_americanus
ENSAMEG00000009508	DDX39B	99	91.121	ENSUMAG00000015124	DDX39B	100	91.121	Ursus_maritimus
ENSAMEG00000009508	DDX39B	61	99.115	ENSVPAG00000009167	-	74	99.115	Vicugna_pacos
ENSAMEG00000009508	DDX39B	100	99.767	ENSVVUG00000019518	DDX39B	99	99.767	Vulpes_vulpes
ENSAMEG00000009508	DDX39B	99	83.721	ENSXETG00000002498	ddx39b	99	83.721	Xenopus_tropicalis