EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000010075 (Gene tree)
Gene ID: 100479398
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 29597 bases
Position: chrGL192357.1:1055371-1084967
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000010580	PWI	PF01480.17	4.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000011038	SRRM1-201	2739	-	ENSAMEP00000010580	913 (aa)	-	G1LU32

Gene Model

Click here to download ENSAMEG00000010075's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03013	RNA transport	KEGG
aml03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000010075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000010075	SRRM1	100	98.357	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSAMEG00000010075	SRRM1	60	65.488	ENSAPLG00000002066	SRRM1	59	76.071	Anas_platyrhynchos
ENSAMEG00000010075	SRRM1	100	97.386	ENSANAG00000035606	SRRM1	100	97.386	Aotus_nancymaae
ENSAMEG00000010075	SRRM1	100	97.495	ENSBTAG00000013772	SRRM1	100	97.495	Bos_taurus
ENSAMEG00000010075	SRRM1	100	97.700	ENSCJAG00000020822	SRRM1	100	97.700	Callithrix_jacchus
ENSAMEG00000010075	SRRM1	88	87.901	ENSCAFG00020000003	-	98	87.901	Canis_lupus_dingo
ENSAMEG00000010075	SRRM1	100	97.386	ENSCAFG00020020948	SRRM1	100	97.386	Canis_lupus_dingo
ENSAMEG00000010075	SRRM1	100	95.874	ENSCHIG00000014656	SRRM1	100	95.874	Capra_hircus
ENSAMEG00000010075	SRRM1	100	98.028	ENSTSYG00000006782	SRRM1	100	98.028	Carlito_syrichta
ENSAMEG00000010075	SRRM1	99	93.963	ENSCAPG00000011473	SRRM1	100	93.963	Cavia_aperea
ENSAMEG00000010075	SRRM1	100	94.989	ENSCPOG00000015594	SRRM1	100	94.989	Cavia_porcellus
ENSAMEG00000010075	SRRM1	100	97.809	ENSCCAG00000029474	SRRM1	100	97.809	Cebus_capucinus
ENSAMEG00000010075	SRRM1	100	97.495	ENSCATG00000031303	SRRM1	100	97.495	Cercocebus_atys
ENSAMEG00000010075	SRRM1	100	95.861	ENSCLAG00000014592	SRRM1	100	95.861	Chinchilla_lanigera
ENSAMEG00000010075	SRRM1	72	99.155	ENSCHOG00000000027	SRRM1	73	99.155	Choloepus_hoffmanni
ENSAMEG00000010075	SRRM1	100	98.028	ENSCANG00000028271	SRRM1	100	98.028	Colobus_angolensis_palliatus
ENSAMEG00000010075	SRRM1	96	93.665	ENSDNOG00000049141	SRRM1	98	93.665	Dasypus_novemcinctus
ENSAMEG00000010075	SRRM1	100	96.841	ENSEASG00005004270	SRRM1	100	96.841	Equus_asinus_asinus
ENSAMEG00000010075	SRRM1	100	96.950	ENSECAG00000026981	SRRM1	100	96.950	Equus_caballus
ENSAMEG00000010075	SRRM1	93	88.462	ENSEEUG00000013830	SRRM1	93	88.462	Erinaceus_europaeus
ENSAMEG00000010075	SRRM1	100	99.343	ENSFCAG00000000678	-	100	99.343	Felis_catus
ENSAMEG00000010075	SRRM1	100	96.732	ENSFDAG00000009903	SRRM1	100	96.732	Fukomys_damarensis
ENSAMEG00000010075	SRRM1	100	98.248	ENSGGOG00000005209	SRRM1	100	98.248	Gorilla_gorilla
ENSAMEG00000010075	SRRM1	100	96.841	ENSHGLG00000017105	SRRM1	100	96.841	Heterocephalus_glaber_female
ENSAMEG00000010075	SRRM1	99	94.858	ENSHGLG00100016772	SRRM1	99	94.858	Heterocephalus_glaber_male
ENSAMEG00000010075	SRRM1	100	97.495	ENSSTOG00000014640	SRRM1	100	97.495	Ictidomys_tridecemlineatus
ENSAMEG00000010075	SRRM1	100	94.592	ENSLAFG00000013830	SRRM1	100	94.592	Loxodonta_africana
ENSAMEG00000010075	SRRM1	100	97.603	ENSMFAG00000025726	SRRM1	100	97.603	Macaca_fascicularis
ENSAMEG00000010075	SRRM1	99	97.265	ENSMMUG00000006645	SRRM1	99	97.265	Macaca_mulatta
ENSAMEG00000010075	SRRM1	100	97.495	ENSMNEG00000039415	SRRM1	100	97.495	Macaca_nemestrina
ENSAMEG00000010075	SRRM1	54	97.405	ENSMLEG00000038030	-	100	91.895	Mandrillus_leucophaeus
ENSAMEG00000010075	SRRM1	100	97.495	ENSMICG00000006553	SRRM1	100	97.495	Microcebus_murinus
ENSAMEG00000010075	SRRM1	59	97.166	MGP_CAROLIEiJ_G0026636	Srrm1	100	85.965	Mus_caroli
ENSAMEG00000010075	SRRM1	59	97.166	ENSMUSG00000028809	Srrm1	100	85.965	Mus_musculus
ENSAMEG00000010075	SRRM1	59	97.571	MGP_PahariEiJ_G0028969	Srrm1	100	85.965	Mus_pahari
ENSAMEG00000010075	SRRM1	59	97.166	MGP_SPRETEiJ_G0027616	Srrm1	100	85.965	Mus_spretus
ENSAMEG00000010075	SRRM1	100	98.357	ENSNLEG00000008966	SRRM1	100	98.357	Nomascus_leucogenys
ENSAMEG00000010075	SRRM1	56	82.031	ENSMEUG00000014704	SRRM1	57	89.947	Notamacropus_eugenii
ENSAMEG00000010075	SRRM1	100	97.162	ENSOCUG00000008438	SRRM1	100	97.162	Oryctolagus_cuniculus
ENSAMEG00000010075	SRRM1	100	96.732	ENSOGAG00000010210	SRRM1	100	96.732	Otolemur_garnettii
ENSAMEG00000010075	SRRM1	92	97.406	ENSOARG00000006453	SRRM1	99	97.406	Ovis_aries
ENSAMEG00000010075	SRRM1	100	98.248	ENSPPAG00000043918	SRRM1	100	98.248	Pan_paniscus
ENSAMEG00000010075	SRRM1	100	99.343	ENSPPRG00000002509	SRRM1	100	99.343	Panthera_pardus
ENSAMEG00000010075	SRRM1	100	94.092	ENSPTIG00000008778	-	100	94.092	Panthera_tigris_altaica
ENSAMEG00000010075	SRRM1	100	97.821	ENSPTRG00000000349	SRRM1	100	97.821	Pan_troglodytes
ENSAMEG00000010075	SRRM1	100	96.296	ENSPANG00000010194	SRRM1	100	96.296	Papio_anubis
ENSAMEG00000010075	SRRM1	100	98.031	ENSPPYG00000001716	SRRM1	100	98.031	Pongo_abelii
ENSAMEG00000010075	SRRM1	52	100.000	ENSPCAG00000015138	SRRM1	52	100.000	Procavia_capensis
ENSAMEG00000010075	SRRM1	100	98.031	ENSPCOG00000021311	SRRM1	100	98.031	Propithecus_coquereli
ENSAMEG00000010075	SRRM1	100	98.248	ENSPVAG00000005836	SRRM1	100	98.248	Pteropus_vampyrus
ENSAMEG00000010075	SRRM1	99	92.342	ENSRBIG00000035461	SRRM1	99	92.342	Rhinopithecus_bieti
ENSAMEG00000010075	SRRM1	100	98.028	ENSRROG00000035151	SRRM1	100	98.028	Rhinopithecus_roxellana
ENSAMEG00000010075	SRRM1	100	96.933	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSAMEG00000010075	SRRM1	60	95.410	ENSSARG00000013718	SRRM1	60	95.410	Sorex_araneus
ENSAMEG00000010075	SRRM1	60	71.698	ENSSPUG00000015890	SRRM1	57	80.627	Sphenodon_punctatus
ENSAMEG00000010075	SRRM1	99	97.805	ENSSSCG00000032947	SRRM1	100	97.725	Sus_scrofa
ENSAMEG00000010075	SRRM1	100	97.481	ENSTBEG00000000100	SRRM1	100	97.481	Tupaia_belangeri
ENSAMEG00000010075	SRRM1	99	97.792	ENSTTRG00000009365	SRRM1	100	97.792	Tursiops_truncatus
ENSAMEG00000010075	SRRM1	96	96.123	ENSVPAG00000007698	SRRM1	100	96.123	Vicugna_pacos
ENSAMEG00000010075	SRRM1	99	94.389	ENSVVUG00000026966	SRRM1	97	94.389	Vulpes_vulpes