EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000010818 (Gene tree)
Gene ID: 100483573
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 11021 bases
Position: chrGL192392.1:2182012-2193032
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000011384	APOBEC_N	PF08210.11	2.4e-84	1	2
ENSAMEP00000011384	APOBEC_N	PF08210.11	2.4e-84	2	2
ENSAMEP00000011384	APOBEC_C	PF05240.14	5.8e-60	1	2
ENSAMEP00000011384	APOBEC_C	PF05240.14	5.8e-60	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000011869	-	1317	-	ENSAMEP00000011384	438 (aa)	-	G1LWD3

Gene Model

Click here to download ENSAMEG00000010818's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000010818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000010818	-	77	36.585	ENSAMEG00000010815	-	74	37.791
ENSAMEG00000010818	-	85	39.227	ENSAMEG00000007082	AICDA	97	39.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000010818	-	76	46.486	ENSG00000100298	APOBEC3H	100	46.486	Homo_sapiens
ENSAMEG00000010818	-	84	47.032	ENSANAG00000025410	APOBEC3H	93	47.032	Aotus_nancymaae
ENSAMEG00000010818	-	97	43.897	ENSBTAG00000007755	APOBEC3H	91	54.255	Bos_taurus
ENSAMEG00000010818	-	76	48.649	ENSCJAG00000012524	APOBEC3H	91	48.966	Callithrix_jacchus
ENSAMEG00000010818	-	86	64.646	ENSCAFG00000001361	APOBEC3Z3	100	64.646	Canis_familiaris
ENSAMEG00000010818	-	82	62.431	ENSCAFG00020002584	-	92	61.749	Canis_lupus_dingo
ENSAMEG00000010818	-	95	46.556	ENSCHIG00000026580	-	100	46.556	Capra_hircus
ENSAMEG00000010818	-	74	50.000	ENSTSYG00000032894	-	99	50.000	Carlito_syrichta
ENSAMEG00000010818	-	99	41.190	ENSCPOG00000009257	-	100	41.317	Cavia_porcellus
ENSAMEG00000010818	-	80	47.805	ENSCCAG00000008525	APOBEC3H	94	47.805	Cebus_capucinus
ENSAMEG00000010818	-	76	49.189	ENSCATG00000030302	APOBEC3H	99	49.189	Cercocebus_atys
ENSAMEG00000010818	-	80	48.990	ENSCLAG00000016615	-	96	48.990	Chinchilla_lanigera
ENSAMEG00000010818	-	80	49.261	ENSCSAG00000006371	APOBEC3H	94	49.261	Chlorocebus_sabaeus
ENSAMEG00000010818	-	98	41.686	ENSCGRG00001022976	Apobec3	92	41.686	Cricetulus_griseus_chok1gshd
ENSAMEG00000010818	-	98	42.632	ENSCGRG00000005621	Apobec3	92	41.686	Cricetulus_griseus_crigri
ENSAMEG00000010818	-	95	39.573	ENSDORG00000027271	-	100	52.174	Dipodomys_ordii
ENSAMEG00000010818	-	75	49.000	ENSEASG00005009166	-	53	52.571	Equus_asinus_asinus
ENSAMEG00000010818	-	82	56.436	ENSECAG00000007726	APOBEC3H	85	56.436	Equus_caballus
ENSAMEG00000010818	-	81	61.616	ENSFCAG00000005251	APOBEC3Z3	99	61.616	Felis_catus
ENSAMEG00000010818	-	78	56.522	ENSSTOG00000007125	-	86	56.522	Ictidomys_tridecemlineatus
ENSAMEG00000010818	-	94	42.063	ENSJJAG00000016840	-	85	42.063	Jaculus_jaculus
ENSAMEG00000010818	-	96	38.756	ENSLAFG00000027404	-	100	38.756	Loxodonta_africana
ENSAMEG00000010818	-	80	49.261	ENSMFAG00000031827	APOBEC3H	94	49.261	Macaca_fascicularis
ENSAMEG00000010818	-	87	46.907	ENSMMUG00000001016	APOBEC3H	97	46.907	Macaca_mulatta
ENSAMEG00000010818	-	80	49.261	ENSMNEG00000039259	APOBEC3H	94	49.261	Macaca_nemestrina
ENSAMEG00000010818	-	80	49.261	ENSMLEG00000033417	APOBEC3H	94	49.261	Mandrillus_leucophaeus
ENSAMEG00000010818	-	98	42.793	ENSMAUG00000011683	Apobec3	92	42.793	Mesocricetus_auratus
ENSAMEG00000010818	-	98	42.155	ENSMOCG00000021576	Apobec3	91	42.131	Microtus_ochrogaster
ENSAMEG00000010818	-	99	39.485	MGP_CAROLIEiJ_G0020029	Apobec3	100	43.529	Mus_caroli
ENSAMEG00000010818	-	99	40.773	ENSMUSG00000009585	Apobec3	100	50.476	Mus_musculus
ENSAMEG00000010818	-	99	38.166	MGP_PahariEiJ_G0020031	-	99	38.166	Mus_pahari
ENSAMEG00000010818	-	99	40.086	MGP_SPRETEiJ_G0020927	Apobec3	100	43.529	Mus_spretus
ENSAMEG00000010818	-	99	60.592	ENSMPUG00000013239	-	100	60.592	Mustela_putorius_furo
ENSAMEG00000010818	-	96	40.984	ENSNGAG00000018998	Apobec3	98	41.818	Nannospalax_galili
ENSAMEG00000010818	-	85	47.291	ENSNLEG00000015218	-	94	47.291	Nomascus_leucogenys
ENSAMEG00000010818	-	97	34.813	ENSOCUG00000023913	-	93	34.813	Oryctolagus_cuniculus
ENSAMEG00000010818	-	95	46.226	ENSOARG00000016290	APOBEC3F	100	46.226	Ovis_aries
ENSAMEG00000010818	-	82	47.027	ENSPPAG00000036522	APOBEC3H	98	47.027	Pan_paniscus
ENSAMEG00000010818	-	81	62.814	ENSPPRG00000003941	-	99	62.814	Panthera_pardus
ENSAMEG00000010818	-	85	65.789	ENSPPRG00000003675	-	99	65.789	Panthera_pardus
ENSAMEG00000010818	-	81	63.317	ENSPTIG00000010283	-	99	63.317	Panthera_tigris_altaica
ENSAMEG00000010818	-	82	47.027	ENSPTRG00000014390	APOBEC3H	98	47.027	Pan_troglodytes
ENSAMEG00000010818	-	80	48.515	ENSPANG00000010774	APOBEC3H	94	48.515	Papio_anubis
ENSAMEG00000010818	-	99	41.176	ENSPEMG00000000456	Apobec3	99	42.048	Peromyscus_maniculatus_bairdii
ENSAMEG00000010818	-	85	46.798	ENSPPYG00000011834	-	94	46.798	Pongo_abelii
ENSAMEG00000010818	-	69	43.889	ENSPCAG00000015655	-	98	43.889	Procavia_capensis
ENSAMEG00000010818	-	58	53.175	ENSPVAG00000024267	-	95	53.175	Pteropus_vampyrus
ENSAMEG00000010818	-	54	61.321	ENSPVAG00000024161	-	95	61.321	Pteropus_vampyrus
ENSAMEG00000010818	-	77	50.000	ENSPVAG00000009462	-	99	50.000	Pteropus_vampyrus
ENSAMEG00000010818	-	98	37.939	ENSRNOG00000016852	Apobec3	92	37.939	Rattus_norvegicus
ENSAMEG00000010818	-	80	49.754	ENSRBIG00000029088	APOBEC3H	94	49.754	Rhinopithecus_bieti
ENSAMEG00000010818	-	83	49.065	ENSRROG00000024699	APOBEC3H	94	49.754	Rhinopithecus_roxellana
ENSAMEG00000010818	-	76	46.524	ENSSBOG00000030005	APOBEC3H	100	47.260	Saimiri_boliviensis_boliviensis
ENSAMEG00000010818	-	98	45.853	ENSSSCG00000000091	APOBEC3B	91	45.853	Sus_scrofa
ENSAMEG00000010818	-	77	52.874	ENSTBEG00000001532	-	99	52.874	Tupaia_belangeri
ENSAMEG00000010818	-	79	56.044	ENSTTRG00000001266	-	100	56.044	Tursiops_truncatus
ENSAMEG00000010818	-	86	81.683	ENSUAMG00000004427	-	89	81.683	Ursus_americanus
ENSAMEG00000010818	-	87	86.070	ENSUMAG00000014435	-	100	85.930	Ursus_maritimus
ENSAMEG00000010818	-	58	54.545	ENSVPAG00000011108	-	99	54.545	Vicugna_pacos
ENSAMEG00000010818	-	68	64.085	ENSVVUG00000014624	-	59	64.085	Vulpes_vulpes