EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000011208 (Gene tree)
Gene ID: 100469832
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 151447 bases
Position: chrGL192574.1:335291-486737
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000011860	RNA_bind	PF08675.11	1.7e-33	1	1
ENSAMEP00000011860	CAF1	PF04857.20	7.1e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000012362	PARN-201	1920	-	ENSAMEP00000011860	639 (aa)	-	G1LXQ5

Gene Model

Click here to download ENSAMEG00000011208's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000011208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000011208	PARN	100	92.812	ENSG00000140694	PARN	100	96.610	Homo_sapiens
ENSAMEG00000011208	PARN	83	75.605	ENSACIG00000000619	parn	83	75.605	Amphilophus_citrinellus
ENSAMEG00000011208	PARN	83	78.131	ENSAOCG00000003465	parn	78	78.131	Amphiprion_ocellaris
ENSAMEG00000011208	PARN	74	77.848	ENSAPEG00000010661	parn	91	77.848	Amphiprion_percula
ENSAMEG00000011208	PARN	83	78.957	ENSATEG00000004661	parn	78	78.957	Anabas_testudineus
ENSAMEG00000011208	PARN	99	82.418	ENSAPLG00000013914	PARN	99	82.418	Anas_platyrhynchos
ENSAMEG00000011208	PARN	100	77.112	ENSACAG00000004973	PARN	100	78.187	Anolis_carolinensis
ENSAMEG00000011208	PARN	100	91.562	ENSANAG00000031516	PARN	100	96.610	Aotus_nancymaae
ENSAMEG00000011208	PARN	83	78.879	ENSACLG00000004742	parn	79	78.879	Astatotilapia_calliptera
ENSAMEG00000011208	PARN	90	73.090	ENSAMXG00000012390	parn	92	71.354	Astyanax_mexicanus
ENSAMEG00000011208	PARN	100	91.393	ENSBTAG00000018097	PARN	100	93.945	Bos_taurus
ENSAMEG00000011208	PARN	100	92.031	ENSCJAG00000015866	PARN	100	96.610	Callithrix_jacchus
ENSAMEG00000011208	PARN	100	96.557	ENSCAFG00000018795	PARN	100	96.557	Canis_familiaris
ENSAMEG00000011208	PARN	100	96.557	ENSCAFG00020024126	PARN	100	96.557	Canis_lupus_dingo
ENSAMEG00000011208	PARN	100	94.523	ENSCHIG00000018143	PARN	100	94.523	Capra_hircus
ENSAMEG00000011208	PARN	73	62.578	ENSCAPG00000007984	PARN	78	62.578	Cavia_aperea
ENSAMEG00000011208	PARN	100	88.732	ENSCPOG00000002263	PARN	100	88.732	Cavia_porcellus
ENSAMEG00000011208	PARN	100	92.344	ENSCCAG00000030367	PARN	100	96.610	Cebus_capucinus
ENSAMEG00000011208	PARN	90	96.559	ENSCATG00000041368	PARN	100	96.610	Cercocebus_atys
ENSAMEG00000011208	PARN	100	89.828	ENSCLAG00000015406	PARN	99	89.828	Chinchilla_lanigera
ENSAMEG00000011208	PARN	100	92.969	ENSCSAG00000008142	PARN	100	92.969	Chlorocebus_sabaeus
ENSAMEG00000011208	PARN	99	76.266	ENSCHOG00000007014	PARN	100	76.266	Choloepus_hoffmanni
ENSAMEG00000011208	PARN	88	84.698	ENSCPBG00000006609	PARN	97	84.758	Chrysemys_picta_bellii
ENSAMEG00000011208	PARN	80	43.633	ENSCING00000010142	-	99	43.633	Ciona_intestinalis
ENSAMEG00000011208	PARN	100	80.273	ENSCANG00000028849	-	100	96.610	Colobus_angolensis_palliatus
ENSAMEG00000011208	PARN	100	85.358	ENSCGRG00001012096	Parn	100	85.358	Cricetulus_griseus_chok1gshd
ENSAMEG00000011208	PARN	74	30.103	ENSCGRG00001007470	-	86	30.103	Cricetulus_griseus_chok1gshd
ENSAMEG00000011208	PARN	74	30.103	ENSCGRG00000010221	-	86	30.103	Cricetulus_griseus_crigri
ENSAMEG00000011208	PARN	100	85.358	ENSCGRG00000004939	Parn	100	85.358	Cricetulus_griseus_crigri
ENSAMEG00000011208	PARN	100	62.697	ENSCSEG00000002064	parn	100	64.253	Cynoglossus_semilaevis
ENSAMEG00000011208	PARN	83	77.654	ENSCVAG00000014848	parn	79	77.654	Cyprinodon_variegatus
ENSAMEG00000011208	PARN	98	66.242	ENSDARG00000102634	parn	88	69.948	Danio_rerio
ENSAMEG00000011208	PARN	100	92.488	ENSDNOG00000000833	PARN	98	95.153	Dasypus_novemcinctus
ENSAMEG00000011208	PARN	74	93.536	ENSETEG00000014828	-	78	93.536	Echinops_telfairi
ENSAMEG00000011208	PARN	100	93.740	ENSEASG00005011400	PARN	100	93.740	Equus_asinus_asinus
ENSAMEG00000011208	PARN	100	93.584	ENSECAG00000017792	PARN	100	93.584	Equus_caballus
ENSAMEG00000011208	PARN	77	94.444	ENSEEUG00000010370	PARN	77	94.444	Erinaceus_europaeus
ENSAMEG00000011208	PARN	90	72.384	ENSELUG00000013139	parn	75	72.384	Esox_lucius
ENSAMEG00000011208	PARN	100	95.931	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSAMEG00000011208	PARN	99	81.487	ENSFALG00000003911	PARN	98	81.487	Ficedula_albicollis
ENSAMEG00000011208	PARN	58	30.749	ENSFALG00000012081	PNLDC1	70	30.749	Ficedula_albicollis
ENSAMEG00000011208	PARN	100	88.889	ENSFDAG00000009234	PARN	100	88.889	Fukomys_damarensis
ENSAMEG00000011208	PARN	83	70.147	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSAMEG00000011208	PARN	83	75.978	ENSGMOG00000003231	parn	97	75.978	Gadus_morhua
ENSAMEG00000011208	PARN	100	80.908	ENSGALG00000003091	PARN	100	80.908	Gallus_gallus
ENSAMEG00000011208	PARN	90	72.326	ENSGAFG00000011061	parn	84	71.524	Gambusia_affinis
ENSAMEG00000011208	PARN	100	68.111	ENSGACG00000019501	parn	100	68.111	Gasterosteus_aculeatus
ENSAMEG00000011208	PARN	51	79.205	ENSGAGG00000023281	PARN	83	79.205	Gopherus_agassizii
ENSAMEG00000011208	PARN	97	93.087	ENSGGOG00000025224	PARN	100	96.610	Gorilla_gorilla
ENSAMEG00000011208	PARN	83	78.879	ENSHBUG00000017906	parn	90	76.766	Haplochromis_burtoni
ENSAMEG00000011208	PARN	100	88.889	ENSHGLG00000010886	PARN	100	88.889	Heterocephalus_glaber_female
ENSAMEG00000011208	PARN	100	88.889	ENSHGLG00100014659	PARN	100	88.889	Heterocephalus_glaber_male
ENSAMEG00000011208	PARN	82	72.642	ENSHCOG00000008683	parn	91	72.642	Hippocampus_comes
ENSAMEG00000011208	PARN	84	65.356	ENSIPUG00000012401	parn	79	65.356	Ictalurus_punctatus
ENSAMEG00000011208	PARN	100	91.080	ENSSTOG00000007519	PARN	100	91.080	Ictidomys_tridecemlineatus
ENSAMEG00000011208	PARN	100	87.950	ENSJJAG00000023049	Parn	100	87.950	Jaculus_jaculus
ENSAMEG00000011208	PARN	83	78.026	ENSKMAG00000009462	parn	84	73.220	Kryptolebias_marmoratus
ENSAMEG00000011208	PARN	90	72.213	ENSLBEG00000009167	parn	89	72.213	Labrus_bergylta
ENSAMEG00000011208	PARN	79	78.020	ENSLACG00000004207	PARN	100	76.651	Latimeria_chalumnae
ENSAMEG00000011208	PARN	90	75.694	ENSLOCG00000000715	parn	87	72.742	Lepisosteus_oculatus
ENSAMEG00000011208	PARN	100	92.175	ENSLAFG00000015036	PARN	100	92.175	Loxodonta_africana
ENSAMEG00000011208	PARN	100	87.832	ENSMFAG00000044852	PARN	100	96.610	Macaca_fascicularis
ENSAMEG00000011208	PARN	100	92.656	ENSMMUG00000018849	PARN	100	96.610	Macaca_mulatta
ENSAMEG00000011208	PARN	100	92.812	ENSMNEG00000045108	PARN	100	96.610	Macaca_nemestrina
ENSAMEG00000011208	PARN	100	92.656	ENSMLEG00000031743	PARN	100	96.610	Mandrillus_leucophaeus
ENSAMEG00000011208	PARN	83	77.467	ENSMAMG00000006939	parn	78	77.467	Mastacembelus_armatus
ENSAMEG00000011208	PARN	89	73.030	ENSMZEG00005013590	parn	95	73.030	Maylandia_zebra
ENSAMEG00000011208	PARN	95	80.624	ENSMGAG00000001004	PARN	95	80.788	Meleagris_gallopavo
ENSAMEG00000011208	PARN	100	79.231	ENSMAUG00000008025	Parn	100	79.231	Mesocricetus_auratus
ENSAMEG00000011208	PARN	100	93.427	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSAMEG00000011208	PARN	77	91.111	ENSMOCG00000022211	Parn	100	91.111	Microtus_ochrogaster
ENSAMEG00000011208	PARN	83	75.933	ENSMMOG00000011333	parn	87	75.933	Mola_mola
ENSAMEG00000011208	PARN	77	93.360	ENSMODG00000004915	PARN	99	93.360	Monodelphis_domestica
ENSAMEG00000011208	PARN	83	78.253	ENSMALG00000019426	parn	91	78.253	Monopterus_albus
ENSAMEG00000011208	PARN	100	85.759	MGP_CAROLIEiJ_G0020466	Parn	100	85.759	Mus_caroli
ENSAMEG00000011208	PARN	51	30.723	ENSMUSG00000073460	Pnldc1	97	30.723	Mus_musculus
ENSAMEG00000011208	PARN	100	85.759	ENSMUSG00000022685	Parn	100	95.122	Mus_musculus
ENSAMEG00000011208	PARN	100	85.446	MGP_PahariEiJ_G0016172	Parn	100	85.446	Mus_pahari
ENSAMEG00000011208	PARN	100	85.759	MGP_SPRETEiJ_G0021361	Parn	100	85.759	Mus_spretus
ENSAMEG00000011208	PARN	100	96.401	ENSMPUG00000014464	PARN	100	96.401	Mustela_putorius_furo
ENSAMEG00000011208	PARN	77	95.344	ENSMLUG00000005414	PARN	100	95.344	Myotis_lucifugus
ENSAMEG00000011208	PARN	83	76.262	ENSNBRG00000006805	parn	90	76.262	Neolamprologus_brichardi
ENSAMEG00000011208	PARN	100	92.656	ENSNLEG00000010241	PARN	100	96.610	Nomascus_leucogenys
ENSAMEG00000011208	PARN	99	60.918	ENSMEUG00000008178	-	100	60.918	Notamacropus_eugenii
ENSAMEG00000011208	PARN	99	85.601	ENSOPRG00000012187	PARN	100	85.601	Ochotona_princeps
ENSAMEG00000011208	PARN	100	80.685	ENSODEG00000001617	PARN	100	80.685	Octodon_degus
ENSAMEG00000011208	PARN	100	69.325	ENSONIG00000000151	parn	100	69.325	Oreochromis_niloticus
ENSAMEG00000011208	PARN	60	81.606	ENSOANG00000020155	-	97	82.677	Ornithorhynchus_anatinus
ENSAMEG00000011208	PARN	99	90.566	ENSOCUG00000000322	PARN	100	90.566	Oryctolagus_cuniculus
ENSAMEG00000011208	PARN	83	76.909	ENSORLG00020010313	parn	100	64.255	Oryzias_latipes_hni
ENSAMEG00000011208	PARN	83	76.909	ENSORLG00015000300	parn	100	64.255	Oryzias_latipes_hsok
ENSAMEG00000011208	PARN	100	65.533	ENSOMEG00000019555	parn	100	65.533	Oryzias_melastigma
ENSAMEG00000011208	PARN	77	92.742	ENSOGAG00000014626	PARN	100	92.742	Otolemur_garnettii
ENSAMEG00000011208	PARN	77	97.571	ENSOARG00000007574	PARN	100	97.571	Ovis_aries
ENSAMEG00000011208	PARN	100	92.500	ENSPPAG00000031438	PARN	100	96.610	Pan_paniscus
ENSAMEG00000011208	PARN	100	95.775	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSAMEG00000011208	PARN	100	95.775	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSAMEG00000011208	PARN	100	92.500	ENSPTRG00000007792	PARN	100	96.610	Pan_troglodytes
ENSAMEG00000011208	PARN	100	89.688	ENSPANG00000020099	PARN	100	96.610	Papio_anubis
ENSAMEG00000011208	PARN	91	72.931	ENSPKIG00000022807	parn	90	69.416	Paramormyrops_kingsleyae
ENSAMEG00000011208	PARN	97	84.430	ENSPSIG00000014804	PARN	100	83.391	Pelodiscus_sinensis
ENSAMEG00000011208	PARN	80	76.117	ENSPMGG00000014431	parn	77	73.153	Periophthalmus_magnuspinnatus
ENSAMEG00000011208	PARN	100	83.099	ENSPEMG00000018439	Parn	100	83.099	Peromyscus_maniculatus_bairdii
ENSAMEG00000011208	PARN	80	67.505	ENSPMAG00000003956	parn	98	67.505	Petromyzon_marinus
ENSAMEG00000011208	PARN	66	85.613	ENSPCIG00000001259	PARN	91	93.220	Phascolarctos_cinereus
ENSAMEG00000011208	PARN	83	77.281	ENSPFOG00000012823	parn	78	77.281	Poecilia_formosa
ENSAMEG00000011208	PARN	83	77.467	ENSPLAG00000006395	parn	78	77.467	Poecilia_latipinna
ENSAMEG00000011208	PARN	83	77.467	ENSPMEG00000007711	parn	78	77.467	Poecilia_mexicana
ENSAMEG00000011208	PARN	83	77.095	ENSPREG00000000147	parn	78	77.095	Poecilia_reticulata
ENSAMEG00000011208	PARN	100	92.212	ENSPPYG00000007123	PARN	100	92.212	Pongo_abelii
ENSAMEG00000011208	PARN	95	82.013	ENSPCAG00000001741	PARN	100	82.013	Procavia_capensis
ENSAMEG00000011208	PARN	100	91.236	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSAMEG00000011208	PARN	99	89.557	ENSPVAG00000002547	PARN	100	89.557	Pteropus_vampyrus
ENSAMEG00000011208	PARN	83	78.879	ENSPNYG00000006835	parn	95	70.455	Pundamilia_nyererei
ENSAMEG00000011208	PARN	83	73.774	ENSPNAG00000018905	parn	84	73.774	Pygocentrus_nattereri
ENSAMEG00000011208	PARN	100	82.648	ENSRNOG00000002912	Parn	98	87.879	Rattus_norvegicus
ENSAMEG00000011208	PARN	52	89.521	ENSRBIG00000018726	PARN	100	89.521	Rhinopithecus_bieti
ENSAMEG00000011208	PARN	52	89.521	ENSRROG00000011162	-	100	89.521	Rhinopithecus_roxellana
ENSAMEG00000011208	PARN	100	90.781	ENSSBOG00000034726	PARN	100	96.610	Saimiri_boliviensis_boliviensis
ENSAMEG00000011208	PARN	66	92.601	ENSSHAG00000008493	PARN	94	92.601	Sarcophilus_harrisii
ENSAMEG00000011208	PARN	96	72.104	ENSSFOG00015014165	parn	92	73.090	Scleropages_formosus
ENSAMEG00000011208	PARN	100	61.846	ENSSMAG00000000685	parn	100	62.154	Scophthalmus_maximus
ENSAMEG00000011208	PARN	86	75.495	ENSSDUG00000014555	parn	80	75.495	Seriola_dumerili
ENSAMEG00000011208	PARN	91	80.690	ENSSARG00000014339	PARN	100	80.690	Sorex_araneus
ENSAMEG00000011208	PARN	100	83.725	ENSSPUG00000007719	PARN	100	83.725	Sphenodon_punctatus
ENSAMEG00000011208	PARN	91	73.445	ENSSPAG00000007095	parn	86	74.206	Stegastes_partitus
ENSAMEG00000011208	PARN	100	93.427	ENSSSCG00000007878	PARN	89	93.427	Sus_scrofa
ENSAMEG00000011208	PARN	55	30.833	ENSTGUG00000011418	PNLDC1	69	30.833	Taeniopygia_guttata
ENSAMEG00000011208	PARN	99	81.546	ENSTGUG00000004971	PARN	99	81.546	Taeniopygia_guttata
ENSAMEG00000011208	PARN	100	68.006	ENSTNIG00000008252	parn	100	68.161	Tetraodon_nigroviridis
ENSAMEG00000011208	PARN	91	78.448	ENSTBEG00000010407	PARN	100	78.448	Tupaia_belangeri
ENSAMEG00000011208	PARN	99	89.082	ENSTTRG00000002843	PARN	100	89.082	Tursiops_truncatus
ENSAMEG00000011208	PARN	68	85.355	ENSUAMG00000008283	PARN	90	85.355	Ursus_americanus
ENSAMEG00000011208	PARN	100	98.905	ENSUMAG00000004527	PARN	100	98.905	Ursus_maritimus
ENSAMEG00000011208	PARN	96	90.569	ENSVPAG00000008968	PARN	100	90.569	Vicugna_pacos
ENSAMEG00000011208	PARN	100	97.027	ENSVVUG00000019509	PARN	100	97.027	Vulpes_vulpes
ENSAMEG00000011208	PARN	100	74.259	ENSXETG00000010994	parn	100	82.163	Xenopus_tropicalis
ENSAMEG00000011208	PARN	90	68.782	ENSXCOG00000015990	parn	96	68.020	Xiphophorus_couchianus
ENSAMEG00000011208	PARN	90	72.384	ENSXMAG00000014783	parn	83	72.384	Xiphophorus_maculatus