EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000011353 (Gene tree)
Gene ID: 100466329
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 6594 bases
Position: chrGL192628.1:1275259-1281852
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000011948	LSM	PF01423.22	5.5e-20	1	1
ENSAMEP00000011955	LSM	PF01423.22	7.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000012460	SNRPB-202	846	-	ENSAMEP00000011955	282 (aa)	-	G1LXZ9
ENSAMET00000012453	SNRPB-201	732	-	ENSAMEP00000011948	243 (aa)	-	G1LXZ2

Gene Model

Click here to download ENSAMEG00000011353's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG
aml05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000011353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000011353	SNRPB	92	91.518	ENSAMEG00000007034	SNRPN	91	92.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000011353	SNRPB	98	100.000	ENSG00000125835	SNRPB	99	100.000	Homo_sapiens
ENSAMEG00000011353	SNRPB	74	92.778	ENSAPOG00000019606	snrpb	56	94.611	Acanthochromis_polyacanthus
ENSAMEG00000011353	SNRPB	72	92.571	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSAMEG00000011353	SNRPB	74	92.778	ENSAOCG00000006876	snrpb	69	94.611	Amphiprion_ocellaris
ENSAMEG00000011353	SNRPB	74	92.778	ENSAPEG00000021585	snrpb	71	94.611	Amphiprion_percula
ENSAMEG00000011353	SNRPB	74	92.222	ENSATEG00000009836	snrpb	69	94.012	Anabas_testudineus
ENSAMEG00000011353	SNRPB	88	95.305	ENSACAG00000002053	SNRPB	92	95.305	Anolis_carolinensis
ENSAMEG00000011353	SNRPB	98	100.000	ENSANAG00000024443	-	99	100.000	Aotus_nancymaae
ENSAMEG00000011353	SNRPB	95	92.609	ENSANAG00000036271	-	76	93.085	Aotus_nancymaae
ENSAMEG00000011353	SNRPB	74	92.778	ENSACLG00000014707	snrpb	69	94.611	Astatotilapia_calliptera
ENSAMEG00000011353	SNRPB	75	92.857	ENSAMXG00000029434	snrpb	70	94.012	Astyanax_mexicanus
ENSAMEG00000011353	SNRPB	94	99.561	ENSBTAG00000001038	SNRPB	99	99.561	Bos_taurus
ENSAMEG00000011353	SNRPB	88	92.019	ENSCJAG00000023097	-	78	92.021	Callithrix_jacchus
ENSAMEG00000011353	SNRPB	94	100.000	ENSCJAG00000020971	-	99	100.000	Callithrix_jacchus
ENSAMEG00000011353	SNRPB	78	87.958	ENSCAFG00000031109	-	79	84.293	Canis_familiaris
ENSAMEG00000011353	SNRPB	94	100.000	ENSCAFG00000006693	-	99	100.000	Canis_familiaris
ENSAMEG00000011353	SNRPB	98	100.000	ENSCAFG00020016981	-	99	100.000	Canis_lupus_dingo
ENSAMEG00000011353	SNRPB	94	99.561	ENSCHIG00000025449	-	99	99.561	Capra_hircus
ENSAMEG00000011353	SNRPB	94	100.000	ENSTSYG00000014498	-	99	100.000	Carlito_syrichta
ENSAMEG00000011353	SNRPB	95	75.758	ENSTSYG00000032303	-	54	80.272	Carlito_syrichta
ENSAMEG00000011353	SNRPB	99	99.585	ENSCAPG00000012669	SNRPB	100	99.585	Cavia_aperea
ENSAMEG00000011353	SNRPB	94	100.000	ENSCPOG00000039408	SNRPB	99	100.000	Cavia_porcellus
ENSAMEG00000011353	SNRPB	98	100.000	ENSCCAG00000026002	SNRPB	99	100.000	Cebus_capucinus
ENSAMEG00000011353	SNRPB	99	69.580	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSAMEG00000011353	SNRPB	94	100.000	ENSCATG00000030230	SNRPB	99	100.000	Cercocebus_atys
ENSAMEG00000011353	SNRPB	98	98.745	ENSCLAG00000012442	SNRPB	99	98.745	Chinchilla_lanigera
ENSAMEG00000011353	SNRPB	94	100.000	ENSCSAG00000010840	SNRPB	99	100.000	Chlorocebus_sabaeus
ENSAMEG00000011353	SNRPB	98	96.653	ENSCPBG00000026801	SNRPB	99	96.653	Chrysemys_picta_bellii
ENSAMEG00000011353	SNRPB	98	100.000	ENSCANG00000019461	SNRPB	99	100.000	Colobus_angolensis_palliatus
ENSAMEG00000011353	SNRPB	94	100.000	ENSCGRG00001023046	Snrpb	99	100.000	Cricetulus_griseus_chok1gshd
ENSAMEG00000011353	SNRPB	91	100.000	ENSCGRG00000010423	Snrpb	98	100.000	Cricetulus_griseus_crigri
ENSAMEG00000011353	SNRPB	75	92.308	ENSCSEG00000020328	snrpb	69	94.611	Cynoglossus_semilaevis
ENSAMEG00000011353	SNRPB	69	92.814	ENSDARG00000011125	snrpb	69	94.611	Danio_rerio
ENSAMEG00000011353	SNRPB	72	93.750	ENSDNOG00000007896	-	71	94.767	Dasypus_novemcinctus
ENSAMEG00000011353	SNRPB	98	100.000	ENSDNOG00000015545	-	99	100.000	Dasypus_novemcinctus
ENSAMEG00000011353	SNRPB	95	99.565	ENSDORG00000029558	Snrpb	100	99.565	Dipodomys_ordii
ENSAMEG00000011353	SNRPB	61	70.270	FBgn0262601	SmB	73	70.270	Drosophila_melanogaster
ENSAMEG00000011353	SNRPB	75	78.571	ENSETEG00000006830	SNRPB	73	77.246	Echinops_telfairi
ENSAMEG00000011353	SNRPB	74	80.000	ENSEBUG00000007467	SNRPB	62	88.514	Eptatretus_burgeri
ENSAMEG00000011353	SNRPB	94	99.561	ENSEASG00005012991	SNRPB	99	99.561	Equus_asinus_asinus
ENSAMEG00000011353	SNRPB	94	100.000	ENSECAG00000011944	SNRPB	99	100.000	Equus_caballus
ENSAMEG00000011353	SNRPB	95	98.268	ENSEEUG00000015568	SNRPB	81	98.268	Erinaceus_europaeus
ENSAMEG00000011353	SNRPB	59	95.833	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSAMEG00000011353	SNRPB	94	100.000	ENSFCAG00000034090	-	99	100.000	Felis_catus
ENSAMEG00000011353	SNRPB	95	96.121	ENSFALG00000004866	SNRPB	100	96.121	Ficedula_albicollis
ENSAMEG00000011353	SNRPB	100	98.354	ENSFDAG00000009937	SNRPB	99	100.000	Fukomys_damarensis
ENSAMEG00000011353	SNRPB	98	96.234	ENSGALG00000035421	SNRPN	99	96.234	Gallus_gallus
ENSAMEG00000011353	SNRPB	72	93.103	ENSGAFG00000019558	snrpb	73	94.083	Gambusia_affinis
ENSAMEG00000011353	SNRPB	75	91.209	ENSGACG00000003262	snrpb	69	94.611	Gasterosteus_aculeatus
ENSAMEG00000011353	SNRPB	98	96.653	ENSGAGG00000001308	SNRPB	99	96.653	Gopherus_agassizii
ENSAMEG00000011353	SNRPB	94	100.000	ENSGGOG00000016138	SNRPB	99	100.000	Gorilla_gorilla
ENSAMEG00000011353	SNRPB	74	92.778	ENSHBUG00000008369	snrpb	69	94.611	Haplochromis_burtoni
ENSAMEG00000011353	SNRPB	61	90.541	ENSHGLG00000016505	-	71	90.541	Heterocephalus_glaber_female
ENSAMEG00000011353	SNRPB	94	100.000	ENSHGLG00000016241	-	99	100.000	Heterocephalus_glaber_female
ENSAMEG00000011353	SNRPB	61	90.541	ENSHGLG00100004178	-	71	90.541	Heterocephalus_glaber_male
ENSAMEG00000011353	SNRPB	98	100.000	ENSHGLG00100012877	-	99	100.000	Heterocephalus_glaber_male
ENSAMEG00000011353	SNRPB	75	92.308	ENSHCOG00000014888	snrpb	69	94.611	Hippocampus_comes
ENSAMEG00000011353	SNRPB	69	92.814	ENSIPUG00000024569	SNRPB	69	94.611	Ictalurus_punctatus
ENSAMEG00000011353	SNRPB	98	98.326	ENSSTOG00000033664	-	99	98.326	Ictidomys_tridecemlineatus
ENSAMEG00000011353	SNRPB	89	81.944	ENSSTOG00000027821	-	62	99.265	Ictidomys_tridecemlineatus
ENSAMEG00000011353	SNRPB	94	100.000	ENSJJAG00000024170	Snrpb	99	100.000	Jaculus_jaculus
ENSAMEG00000011353	SNRPB	71	94.186	ENSKMAG00000014494	snrpb	68	95.210	Kryptolebias_marmoratus
ENSAMEG00000011353	SNRPB	75	92.308	ENSLBEG00000005678	snrpb	69	94.611	Labrus_bergylta
ENSAMEG00000011353	SNRPB	91	93.182	ENSLACG00000011459	SNRPB	92	93.182	Latimeria_chalumnae
ENSAMEG00000011353	SNRPB	69	94.012	ENSLOCG00000002687	snrpb	69	95.210	Lepisosteus_oculatus
ENSAMEG00000011353	SNRPB	94	96.070	ENSLAFG00000017588	SNRPB	99	96.070	Loxodonta_africana
ENSAMEG00000011353	SNRPB	94	100.000	ENSMFAG00000038756	SNRPB	99	100.000	Macaca_fascicularis
ENSAMEG00000011353	SNRPB	94	100.000	ENSMMUG00000010050	SNRPB	99	100.000	Macaca_mulatta
ENSAMEG00000011353	SNRPB	94	100.000	ENSMNEG00000027954	SNRPB	99	100.000	Macaca_nemestrina
ENSAMEG00000011353	SNRPB	98	100.000	ENSMLEG00000022346	SNRPB	99	100.000	Mandrillus_leucophaeus
ENSAMEG00000011353	SNRPB	76	91.304	ENSMAMG00000009294	snrpb	69	92.982	Mastacembelus_armatus
ENSAMEG00000011353	SNRPB	74	92.778	ENSMZEG00005011856	snrpb	69	94.611	Maylandia_zebra
ENSAMEG00000011353	SNRPB	98	82.700	ENSMICG00000015983	-	86	89.894	Microcebus_murinus
ENSAMEG00000011353	SNRPB	94	99.561	ENSMICG00000016519	SNRPB	99	99.561	Microcebus_murinus
ENSAMEG00000011353	SNRPB	68	69.880	ENSMOCG00000021362	-	71	73.256	Microtus_ochrogaster
ENSAMEG00000011353	SNRPB	94	99.561	ENSMOCG00000002892	-	99	99.561	Microtus_ochrogaster
ENSAMEG00000011353	SNRPB	77	91.398	ENSMMOG00000013226	snrpb	73	93.567	Mola_mola
ENSAMEG00000011353	SNRPB	74	92.222	ENSMALG00000020839	snrpb	56	94.012	Monopterus_albus
ENSAMEG00000011353	SNRPB	94	99.561	MGP_CAROLIEiJ_G0024293	Snrpb	99	99.561	Mus_caroli
ENSAMEG00000011353	SNRPB	94	99.561	ENSMUSG00000027404	Snrpb	99	99.561	Mus_musculus
ENSAMEG00000011353	SNRPB	94	99.561	MGP_PahariEiJ_G0025738	Snrpb	99	99.561	Mus_pahari
ENSAMEG00000011353	SNRPB	94	99.561	MGP_SPRETEiJ_G0025213	Snrpb	99	99.561	Mus_spretus
ENSAMEG00000011353	SNRPB	94	100.000	ENSMPUG00000009283	SNRPB	99	100.000	Mustela_putorius_furo
ENSAMEG00000011353	SNRPB	98	96.653	ENSMLUG00000016951	SNRPB	99	96.653	Myotis_lucifugus
ENSAMEG00000011353	SNRPB	94	100.000	ENSNGAG00000012051	Snrpb	99	100.000	Nannospalax_galili
ENSAMEG00000011353	SNRPB	73	91.525	ENSNBRG00000006353	snrpb	61	94.444	Neolamprologus_brichardi
ENSAMEG00000011353	SNRPB	98	100.000	ENSNLEG00000029067	SNRPB	99	100.000	Nomascus_leucogenys
ENSAMEG00000011353	SNRPB	93	97.333	ENSMEUG00000015625	SNRPB	100	97.333	Notamacropus_eugenii
ENSAMEG00000011353	SNRPB	98	96.234	ENSODEG00000004305	-	99	100.000	Octodon_degus
ENSAMEG00000011353	SNRPB	98	95.397	ENSODEG00000016060	-	99	95.397	Octodon_degus
ENSAMEG00000011353	SNRPB	74	92.778	ENSONIG00000000248	snrpb	69	94.611	Oreochromis_niloticus
ENSAMEG00000011353	SNRPB	88	94.860	ENSOCUG00000021456	-	78	95.745	Oryctolagus_cuniculus
ENSAMEG00000011353	SNRPB	98	99.582	ENSOCUG00000014042	-	99	99.582	Oryctolagus_cuniculus
ENSAMEG00000011353	SNRPB	88	71.628	ENSOCUG00000026813	-	71	72.289	Oryctolagus_cuniculus
ENSAMEG00000011353	SNRPB	98	97.071	ENSOCUG00000028215	-	99	97.071	Oryctolagus_cuniculus
ENSAMEG00000011353	SNRPB	73	93.258	ENSOCUG00000022423	-	86	96.407	Oryctolagus_cuniculus
ENSAMEG00000011353	SNRPB	74	92.265	ENSORLG00000021862	snrpb	69	94.611	Oryzias_latipes
ENSAMEG00000011353	SNRPB	98	100.000	ENSOGAG00000016149	SNRPB	99	100.000	Otolemur_garnettii
ENSAMEG00000011353	SNRPB	94	99.561	ENSOARG00000006740	SNRPB	99	99.561	Ovis_aries
ENSAMEG00000011353	SNRPB	94	100.000	ENSPPAG00000036314	SNRPB	99	100.000	Pan_paniscus
ENSAMEG00000011353	SNRPB	98	100.000	ENSPPRG00000003233	-	99	100.000	Panthera_pardus
ENSAMEG00000011353	SNRPB	98	100.000	ENSPTIG00000007468	SNRPB	99	100.000	Panthera_tigris_altaica
ENSAMEG00000011353	SNRPB	94	100.000	ENSPTRG00000013176	SNRPB	99	100.000	Pan_troglodytes
ENSAMEG00000011353	SNRPB	98	100.000	ENSPANG00000020362	SNRPB	99	100.000	Papio_anubis
ENSAMEG00000011353	SNRPB	69	92.216	ENSPKIG00000002865	snrpb	69	94.012	Paramormyrops_kingsleyae
ENSAMEG00000011353	SNRPB	100	96.296	ENSPSIG00000014125	SNRPB	100	96.296	Pelodiscus_sinensis
ENSAMEG00000011353	SNRPB	73	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSAMEG00000011353	SNRPB	94	100.000	ENSPEMG00000007948	Snrpb	99	100.000	Peromyscus_maniculatus_bairdii
ENSAMEG00000011353	SNRPB	99	97.095	ENSPCIG00000004694	SNRPB	100	97.095	Phascolarctos_cinereus
ENSAMEG00000011353	SNRPB	76	67.907	ENSPLAG00000014130	snrpb	59	95.556	Poecilia_latipinna
ENSAMEG00000011353	SNRPB	67	76.842	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSAMEG00000011353	SNRPB	94	100.000	ENSPPYG00000010841	SNRPB	99	100.000	Pongo_abelii
ENSAMEG00000011353	SNRPB	94	100.000	ENSPCOG00000013686	SNRPB	99	100.000	Propithecus_coquereli
ENSAMEG00000011353	SNRPB	99	95.439	ENSPVAG00000017013	SNRPB	99	95.439	Pteropus_vampyrus
ENSAMEG00000011353	SNRPB	74	92.778	ENSPNYG00000014788	snrpb	69	94.611	Pundamilia_nyererei
ENSAMEG00000011353	SNRPB	75	92.857	ENSPNAG00000016126	snrpb	69	94.611	Pygocentrus_nattereri
ENSAMEG00000011353	SNRPB	94	100.000	ENSRNOG00000006961	Snrpb	99	100.000	Rattus_norvegicus
ENSAMEG00000011353	SNRPB	98	99.582	ENSRBIG00000040505	SNRPB	99	99.582	Rhinopithecus_bieti
ENSAMEG00000011353	SNRPB	98	100.000	ENSRROG00000036094	SNRPB	99	100.000	Rhinopithecus_roxellana
ENSAMEG00000011353	SNRPB	98	100.000	ENSSBOG00000027310	SNRPB	99	100.000	Saimiri_boliviensis_boliviensis
ENSAMEG00000011353	SNRPB	98	98.326	ENSSHAG00000010394	SNRPB	99	98.326	Sarcophilus_harrisii
ENSAMEG00000011353	SNRPB	69	92.216	ENSSFOG00015002870	snrpb	70	93.413	Scleropages_formosus
ENSAMEG00000011353	SNRPB	75	91.758	ENSSMAG00000006766	snrpb	69	94.012	Scophthalmus_maximus
ENSAMEG00000011353	SNRPB	74	92.778	ENSSDUG00000018539	snrpb	69	94.611	Seriola_dumerili
ENSAMEG00000011353	SNRPB	74	92.778	ENSSLDG00000022391	snrpb	69	94.611	Seriola_lalandi_dorsalis
ENSAMEG00000011353	SNRPB	71	84.884	ENSSARG00000003084	SNRPB	74	84.884	Sorex_araneus
ENSAMEG00000011353	SNRPB	98	96.653	ENSSPUG00000015659	SNRPB	100	96.653	Sphenodon_punctatus
ENSAMEG00000011353	SNRPB	74	92.778	ENSSPAG00000021992	snrpb	69	94.611	Stegastes_partitus
ENSAMEG00000011353	SNRPB	95	99.138	ENSSSCG00000040857	-	99	99.561	Sus_scrofa
ENSAMEG00000011353	SNRPB	94	80.263	ENSSSCG00000011966	-	90	76.303	Sus_scrofa
ENSAMEG00000011353	SNRPB	73	79.661	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSAMEG00000011353	SNRPB	75	91.758	ENSTRUG00000023094	snrpb	72	94.012	Takifugu_rubripes
ENSAMEG00000011353	SNRPB	75	91.758	ENSTNIG00000002991	snrpb	69	94.012	Tetraodon_nigroviridis
ENSAMEG00000011353	SNRPB	71	100.000	ENSUAMG00000005984	-	82	100.000	Ursus_americanus
ENSAMEG00000011353	SNRPB	56	99.270	ENSUMAG00000002123	-	63	99.270	Ursus_maritimus
ENSAMEG00000011353	SNRPB	98	76.569	ENSVVUG00000010086	-	84	81.026	Vulpes_vulpes
ENSAMEG00000011353	SNRPB	95	40.972	ENSVVUG00000018297	-	86	40.972	Vulpes_vulpes
ENSAMEG00000011353	SNRPB	98	99.582	ENSVVUG00000025654	-	99	99.582	Vulpes_vulpes
ENSAMEG00000011353	SNRPB	91	95.455	ENSXETG00000027266	snrpb	93	95.455	Xenopus_tropicalis
ENSAMEG00000011353	SNRPB	92	65.022	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus