EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000011401 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 22089 bases
Position: chrGL194119.1:125339-147427
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000012016	Nop52	PF05997.12	3.2e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000012523	RRP1B-201	2184	-	ENSAMEP00000012016	727 (aa)	-	G1LY60

Gene Model

Click here to download ENSAMEG00000011401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000011401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000011401	RRP1B	98	63.325	ENSG00000160208	RRP1B	71	81.890	Homo_sapiens
ENSAMEG00000011401	RRP1B	58	52.632	ENSAOCG00000017894	-	98	54.737	Amphiprion_ocellaris
ENSAMEG00000011401	RRP1B	62	64.463	ENSAPLG00000004310	RRP1B	84	58.982	Anas_platyrhynchos
ENSAMEG00000011401	RRP1B	70	59.055	ENSACAG00000017851	RRP1B	66	60.156	Anolis_carolinensis
ENSAMEG00000011401	RRP1B	98	62.812	ENSANAG00000034889	RRP1B	73	79.612	Aotus_nancymaae
ENSAMEG00000011401	RRP1B	50	48.913	ENSBTAG00000003981	RRP1	79	50.136	Bos_taurus
ENSAMEG00000011401	RRP1B	76	76.190	ENSBTAG00000017418	RRP1B	73	76.190	Bos_taurus
ENSAMEG00000011401	RRP1B	98	60.260	ENSCJAG00000017077	RRP1B	71	80.101	Callithrix_jacchus
ENSAMEG00000011401	RRP1B	59	44.875	ENSCAFG00000010646	RRP1	95	43.226	Canis_familiaris
ENSAMEG00000011401	RRP1B	74	90.000	ENSCAFG00000010621	RRP1B	73	90.000	Canis_familiaris
ENSAMEG00000011401	RRP1B	77	88.462	ENSCAFG00020018901	RRP1B	73	89.604	Canis_lupus_dingo
ENSAMEG00000011401	RRP1B	59	44.875	ENSCAFG00020018979	RRP1	76	51.567	Canis_lupus_dingo
ENSAMEG00000011401	RRP1B	50	48.780	ENSCHIG00000020948	RRP1	80	49.593	Capra_hircus
ENSAMEG00000011401	RRP1B	74	78.571	ENSCHIG00000021519	RRP1B	73	78.571	Capra_hircus
ENSAMEG00000011401	RRP1B	58	64.733	ENSCPOG00000002396	RRP1B	58	65.468	Cavia_porcellus
ENSAMEG00000011401	RRP1B	58	47.418	ENSCCAG00000029828	RRP1	78	50.685	Cebus_capucinus
ENSAMEG00000011401	RRP1B	98	63.081	ENSCCAG00000029384	RRP1B	64	79.009	Cebus_capucinus
ENSAMEG00000011401	RRP1B	98	63.399	ENSCATG00000017423	RRP1B	71	81.890	Cercocebus_atys
ENSAMEG00000011401	RRP1B	76	76.190	ENSCLAG00000005622	RRP1B	98	53.985	Chinchilla_lanigera
ENSAMEG00000011401	RRP1B	98	63.351	ENSCSAG00000007961	RRP1B	71	81.890	Chlorocebus_sabaeus
ENSAMEG00000011401	RRP1B	66	63.920	ENSCPBG00000010310	RRP1B	65	63.068	Chrysemys_picta_bellii
ENSAMEG00000011401	RRP1B	53	32.737	ENSCING00000003304	-	79	32.976	Ciona_intestinalis
ENSAMEG00000011401	RRP1B	80	82.812	ENSCANG00000040952	RRP1B	71	81.102	Colobus_angolensis_palliatus
ENSAMEG00000011401	RRP1B	98	55.946	ENSCGRG00001023882	-	55	67.797	Cricetulus_griseus_chok1gshd
ENSAMEG00000011401	RRP1B	98	55.946	ENSCGRG00001010889	-	55	67.797	Cricetulus_griseus_chok1gshd
ENSAMEG00000011401	RRP1B	94	55.337	ENSCGRG00000001553	Rrp1b	53	67.358	Cricetulus_griseus_crigri
ENSAMEG00000011401	RRP1B	61	55.682	ENSCSEG00000020711	-	78	49.451	Cynoglossus_semilaevis
ENSAMEG00000011401	RRP1B	60	44.308	ENSDARG00000103337	rrp1	60	44.304	Danio_rerio
ENSAMEG00000011401	RRP1B	83	70.175	ENSDNOG00000032774	RRP1B	71	75.182	Dasypus_novemcinctus
ENSAMEG00000011401	RRP1B	53	50.904	ENSDNOG00000019880	RRP1	80	52.186	Dasypus_novemcinctus
ENSAMEG00000011401	RRP1B	64	85.714	ENSETEG00000019489	RRP1B	64	85.714	Echinops_telfairi
ENSAMEG00000011401	RRP1B	50	49.727	ENSEASG00005001673	RRP1	81	50.546	Equus_asinus_asinus
ENSAMEG00000011401	RRP1B	76	84.496	ENSEASG00005001687	RRP1B	72	84.496	Equus_asinus_asinus
ENSAMEG00000011401	RRP1B	50	50.000	ENSECAG00000015703	RRP1	81	51.093	Equus_caballus
ENSAMEG00000011401	RRP1B	76	83.721	ENSECAG00000018018	RRP1B	72	83.721	Equus_caballus
ENSAMEG00000011401	RRP1B	64	51.613	ENSELUG00000015885	-	96	42.466	Esox_lucius
ENSAMEG00000011401	RRP1B	98	66.532	ENSFCAG00000010272	RRP1B	98	64.683	Felis_catus
ENSAMEG00000011401	RRP1B	50	50.543	ENSFCAG00000008434	RRP1	79	51.099	Felis_catus
ENSAMEG00000011401	RRP1B	76	58.781	ENSFALG00000002024	RRP1B	84	56.075	Ficedula_albicollis
ENSAMEG00000011401	RRP1B	59	43.213	ENSFDAG00000013728	RRP1	85	45.685	Fukomys_damarensis
ENSAMEG00000011401	RRP1B	69	76.984	ENSFDAG00000010899	RRP1B	69	76.984	Fukomys_damarensis
ENSAMEG00000011401	RRP1B	56	52.632	ENSFHEG00000016314	-	51	51.579	Fundulus_heteroclitus
ENSAMEG00000011401	RRP1B	64	45.872	ENSGMOG00000001953	-	68	45.455	Gadus_morhua
ENSAMEG00000011401	RRP1B	70	57.218	ENSGALG00000035696	RRP1B	66	57.218	Gallus_gallus
ENSAMEG00000011401	RRP1B	66	45.736	ENSGACG00000001438	rrp1	72	45.385	Gasterosteus_aculeatus
ENSAMEG00000011401	RRP1B	67	62.050	ENSGAGG00000000375	RRP1B	68	60.759	Gopherus_agassizii
ENSAMEG00000011401	RRP1B	98	63.325	ENSGGOG00000012069	RRP1B	71	81.890	Gorilla_gorilla
ENSAMEG00000011401	RRP1B	70	73.282	ENSHGLG00000004968	RRP1B	71	73.282	Heterocephalus_glaber_female
ENSAMEG00000011401	RRP1B	65	73.282	ENSHGLG00100002232	RRP1B	64	73.282	Heterocephalus_glaber_male
ENSAMEG00000011401	RRP1B	65	45.299	ENSHCOG00000018388	-	60	43.590	Hippocampus_comes
ENSAMEG00000011401	RRP1B	59	45.370	ENSIPUG00000000673	-	71	42.328	Ictalurus_punctatus
ENSAMEG00000011401	RRP1B	56	47.722	ENSSTOG00000011116	RRP1	73	54.799	Ictidomys_tridecemlineatus
ENSAMEG00000011401	RRP1B	56	75.787	ENSSTOG00000011790	RRP1B	60	74.710	Ictidomys_tridecemlineatus
ENSAMEG00000011401	RRP1B	65	76.866	ENSJJAG00000021279	Rrp1b	72	75.758	Jaculus_jaculus
ENSAMEG00000011401	RRP1B	61	49.206	ENSKMAG00000005539	rrp1	72	47.581	Kryptolebias_marmoratus
ENSAMEG00000011401	RRP1B	68	51.989	ENSLACG00000017332	-	68	51.989	Latimeria_chalumnae
ENSAMEG00000011401	RRP1B	65	50.394	ENSLOCG00000004064	-	69	48.252	Lepisosteus_oculatus
ENSAMEG00000011401	RRP1B	88	54.440	ENSLAFG00000000766	RRP1B	92	68.056	Loxodonta_africana
ENSAMEG00000011401	RRP1B	52	49.616	ENSLAFG00000022901	RRP1	86	49.490	Loxodonta_africana
ENSAMEG00000011401	RRP1B	98	63.613	ENSMFAG00000039152	RRP1B	71	82.677	Macaca_fascicularis
ENSAMEG00000011401	RRP1B	98	61.008	ENSMMUG00000000104	RRP1B	72	81.022	Macaca_mulatta
ENSAMEG00000011401	RRP1B	98	63.351	ENSMNEG00000034269	RRP1B	71	81.102	Macaca_nemestrina
ENSAMEG00000011401	RRP1B	97	61.133	ENSMLEG00000040044	RRP1B	71	82.677	Mandrillus_leucophaeus
ENSAMEG00000011401	RRP1B	70	56.693	ENSMGAG00000014591	RRP1B	66	56.693	Meleagris_gallopavo
ENSAMEG00000011401	RRP1B	98	52.894	ENSMAUG00000021508	Rrp1b	98	53.235	Mesocricetus_auratus
ENSAMEG00000011401	RRP1B	76	80.620	ENSMICG00000004686	RRP1B	74	81.010	Microcebus_murinus
ENSAMEG00000011401	RRP1B	57	62.802	ENSMOCG00000001117	Rrp1b	54	64.461	Microtus_ochrogaster
ENSAMEG00000011401	RRP1B	59	47.696	ENSMODG00000021036	-	54	54.144	Monodelphis_domestica
ENSAMEG00000011401	RRP1B	76	73.402	ENSMODG00000021033	RRP1B	72	73.402	Monodelphis_domestica
ENSAMEG00000011401	RRP1B	50	44.800	ENSMALG00000010310	rrp1	95	44.800	Monopterus_albus
ENSAMEG00000011401	RRP1B	98	53.635	MGP_CAROLIEiJ_G0021376	Rrp1b	98	53.635	Mus_caroli
ENSAMEG00000011401	RRP1B	99	53.117	ENSMUSG00000058392	Rrp1b	98	54.025	Mus_musculus
ENSAMEG00000011401	RRP1B	99	54.830	MGP_PahariEiJ_G0023695	Rrp1b	98	55.328	Mus_pahari
ENSAMEG00000011401	RRP1B	54	53.846	MGP_SPRETEiJ_G0016321	Rrp1	94	40.380	Mus_spretus
ENSAMEG00000011401	RRP1B	99	54.309	MGP_SPRETEiJ_G0022290	Rrp1b	98	54.883	Mus_spretus
ENSAMEG00000011401	RRP1B	63	83.824	ENSMPUG00000009810	RRP1B	70	84.469	Mustela_putorius_furo
ENSAMEG00000011401	RRP1B	77	84.921	ENSMLUG00000007738	RRP1B	73	84.127	Myotis_lucifugus
ENSAMEG00000011401	RRP1B	53	44.796	ENSMLUG00000017788	RRP1	82	45.952	Myotis_lucifugus
ENSAMEG00000011401	RRP1B	57	78.436	ENSNLEG00000001490	RRP1B	56	79.805	Nomascus_leucogenys
ENSAMEG00000011401	RRP1B	58	82.143	ENSMEUG00000003226	-	61	85.714	Notamacropus_eugenii
ENSAMEG00000011401	RRP1B	98	52.668	ENSODEG00000013177	RRP1B	77	67.347	Octodon_degus
ENSAMEG00000011401	RRP1B	63	50.877	ENSONIG00000004264	rrp1	64	50.000	Oreochromis_niloticus
ENSAMEG00000011401	RRP1B	68	67.692	ENSOANG00000006470	RRP1B	67	67.692	Ornithorhynchus_anatinus
ENSAMEG00000011401	RRP1B	68	46.457	ENSORLG00020007199	-	56	51.087	Oryzias_latipes_hni
ENSAMEG00000011401	RRP1B	68	44.800	ENSORLG00015004425	-	56	45.600	Oryzias_latipes_hsok
ENSAMEG00000011401	RRP1B	59	56.790	ENSOMEG00000016910	-	54	56.790	Oryzias_melastigma
ENSAMEG00000011401	RRP1B	73	78.070	ENSOGAG00000009872	RRP1B	78	79.798	Otolemur_garnettii
ENSAMEG00000011401	RRP1B	70	74.674	ENSOARG00000011314	RRP1B	73	74.674	Ovis_aries
ENSAMEG00000011401	RRP1B	94	61.781	ENSPPAG00000035319	RRP1B	71	81.102	Pan_paniscus
ENSAMEG00000011401	RRP1B	80	83.969	ENSPPRG00000010356	RRP1B	73	84.185	Panthera_pardus
ENSAMEG00000011401	RRP1B	70	83.969	ENSPTIG00000016894	RRP1B	88	83.206	Panthera_tigris_altaica
ENSAMEG00000011401	RRP1B	99	62.696	ENSPTRG00000013958	RRP1B	71	80.535	Pan_troglodytes
ENSAMEG00000011401	RRP1B	98	63.612	ENSPANG00000011090	RRP1B	71	81.890	Papio_anubis
ENSAMEG00000011401	RRP1B	58	47.552	ENSPANG00000015097	RRP1	72	53.731	Papio_anubis
ENSAMEG00000011401	RRP1B	65	51.261	ENSPKIG00000003422	-	66	50.420	Paramormyrops_kingsleyae
ENSAMEG00000011401	RRP1B	65	63.277	ENSPSIG00000008152	RRP1B	63	61.518	Pelodiscus_sinensis
ENSAMEG00000011401	RRP1B	98	54.582	ENSPEMG00000022490	Rrp1b	55	66.180	Peromyscus_maniculatus_bairdii
ENSAMEG00000011401	RRP1B	99	56.978	ENSPCIG00000015513	RRP1B	71	87.500	Phascolarctos_cinereus
ENSAMEG00000011401	RRP1B	59	49.184	ENSPCIG00000015523	-	80	53.887	Phascolarctos_cinereus
ENSAMEG00000011401	RRP1B	73	44.755	ENSPFOG00000007424	-	68	42.143	Poecilia_formosa
ENSAMEG00000011401	RRP1B	62	39.207	ENSPLAG00000016684	-	52	43.836	Poecilia_latipinna
ENSAMEG00000011401	RRP1B	80	42.949	ENSPMEG00000007042	-	60	43.889	Poecilia_mexicana
ENSAMEG00000011401	RRP1B	67	44.134	ENSPREG00000015673	-	53	52.000	Poecilia_reticulata
ENSAMEG00000011401	RRP1B	98	63.373	ENSPPYG00000011470	RRP1B	71	81.890	Pongo_abelii
ENSAMEG00000011401	RRP1B	85	84.211	ENSPCAG00000013723	RRP1B	62	84.211	Procavia_capensis
ENSAMEG00000011401	RRP1B	76	82.308	ENSPCOG00000017927	RRP1B	75	82.308	Propithecus_coquereli
ENSAMEG00000011401	RRP1B	79	76.984	ENSPVAG00000001436	RRP1B	71	76.984	Pteropus_vampyrus
ENSAMEG00000011401	RRP1B	68	62.500	ENSPNAG00000007718	-	53	58.750	Pygocentrus_nattereri
ENSAMEG00000011401	RRP1B	99	54.654	ENSRNOG00000001194	Rrp1b	100	54.727	Rattus_norvegicus
ENSAMEG00000011401	RRP1B	80	81.890	ENSRBIG00000041689	RRP1B	70	81.890	Rhinopithecus_bieti
ENSAMEG00000011401	RRP1B	80	81.890	ENSRROG00000031499	RRP1B	71	81.890	Rhinopithecus_roxellana
ENSAMEG00000011401	RRP1B	50	49.587	ENSSBOG00000034689	RRP1	79	49.587	Saimiri_boliviensis_boliviensis
ENSAMEG00000011401	RRP1B	94	59.043	ENSSBOG00000034727	RRP1B	54	74.010	Saimiri_boliviensis_boliviensis
ENSAMEG00000011401	RRP1B	99	57.474	ENSSHAG00000017789	RRP1B	77	70.258	Sarcophilus_harrisii
ENSAMEG00000011401	RRP1B	66	49.580	ENSSFOG00015003932	-	62	50.413	Scleropages_formosus
ENSAMEG00000011401	RRP1B	65	47.692	ENSSMAG00000016847	-	86	43.889	Scophthalmus_maximus
ENSAMEG00000011401	RRP1B	68	45.588	ENSSDUG00000000551	-	54	45.144	Seriola_dumerili
ENSAMEG00000011401	RRP1B	68	47.059	ENSSLDG00000002538	-	54	45.407	Seriola_lalandi_dorsalis
ENSAMEG00000011401	RRP1B	57	74.615	ENSSARG00000003108	-	61	72.093	Sorex_araneus
ENSAMEG00000011401	RRP1B	65	54.790	ENSSPUG00000002834	RRP1B	68	52.956	Sphenodon_punctatus
ENSAMEG00000011401	RRP1B	64	48.819	ENSSPAG00000005370	-	50	48.819	Stegastes_partitus
ENSAMEG00000011401	RRP1B	68	83.333	ENSSSCG00000021698	RRP1B	73	83.333	Sus_scrofa
ENSAMEG00000011401	RRP1B	61	60.450	ENSTGUG00000005926	RRP1B	63	59.692	Taeniopygia_guttata
ENSAMEG00000011401	RRP1B	60	50.000	ENSTNIG00000005053	rrp1	71	44.340	Tetraodon_nigroviridis
ENSAMEG00000011401	RRP1B	64	81.361	ENSTBEG00000000422	RRP1B	81	81.361	Tupaia_belangeri
ENSAMEG00000011401	RRP1B	74	76.499	ENSTTRG00000000723	RRP1B	74	79.126	Tursiops_truncatus
ENSAMEG00000011401	RRP1B	99	77.702	ENSUAMG00000026765	RRP1B	79	96.829	Ursus_americanus
ENSAMEG00000011401	RRP1B	66	95.930	ENSUMAG00000025510	RRP1B	91	96.154	Ursus_maritimus
ENSAMEG00000011401	RRP1B	94	68.776	ENSVVUG00000024509	RRP1B	73	90.000	Vulpes_vulpes
ENSAMEG00000011401	RRP1B	61	46.178	ENSXETG00000013683	rrp1b	65	46.497	Xenopus_tropicalis
ENSAMEG00000011401	RRP1B	61	55.446	ENSXMAG00000023123	-	58	51.485	Xiphophorus_maculatus