EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000011817 (Gene tree)
Gene ID: 100479487
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 90283 bases
Position: chrGL192825.1:310263-400545
Accession: 17575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000012429	RRM_5	PF13893.6	3.9e-07	1	2
ENSAMEP00000012429	RRM_5	PF13893.6	3.9e-07	2	2
ENSAMEP00000012429	RRM_1	PF00076.22	4e-42	1	4
ENSAMEP00000012429	RRM_1	PF00076.22	4e-42	2	4
ENSAMEP00000012429	RRM_1	PF00076.22	4e-42	3	4
ENSAMEP00000012429	RRM_1	PF00076.22	4e-42	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000012962	SPEN-201	10989	-	ENSAMEP00000012429	3663 (aa)	-	G1LZC1

Gene Model

Click here to download ENSAMEG00000011817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000011817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000011817	SPEN	100	88.250	ENSG00000065526	SPEN	99	99.663	Homo_sapiens
ENSAMEG00000011817	SPEN	92	81.319	ENSAPOG00000009853	-	91	74.157	Acanthochromis_polyacanthus
ENSAMEG00000011817	SPEN	75	75.758	ENSAPOG00000011411	si:ch1073-335m2.2	62	76.289	Acanthochromis_polyacanthus
ENSAMEG00000011817	SPEN	92	81.319	ENSAOCG00000014505	-	69	57.563	Amphiprion_ocellaris
ENSAMEG00000011817	SPEN	69	77.778	ENSAOCG00000008077	si:ch1073-335m2.2	59	77.778	Amphiprion_ocellaris
ENSAMEG00000011817	SPEN	92	81.319	ENSAPEG00000010288	-	69	57.563	Amphiprion_percula
ENSAMEG00000011817	SPEN	77	77.778	ENSAPEG00000013515	si:ch1073-335m2.2	73	83.626	Amphiprion_percula
ENSAMEG00000011817	SPEN	96	81.461	ENSATEG00000005627	-	99	46.560	Anabas_testudineus
ENSAMEG00000011817	SPEN	79	84.615	ENSATEG00000007674	si:ch1073-335m2.2	89	84.615	Anabas_testudineus
ENSAMEG00000011817	SPEN	96	63.586	ENSACAG00000013761	SPEN	100	63.520	Anolis_carolinensis
ENSAMEG00000011817	SPEN	99	87.130	ENSANAG00000034428	SPEN	99	86.855	Aotus_nancymaae
ENSAMEG00000011817	SPEN	96	80.337	ENSACLG00000016922	-	69	56.898	Astatotilapia_calliptera
ENSAMEG00000011817	SPEN	64	84.211	ENSACLG00000021433	si:ch1073-335m2.2	67	84.211	Astatotilapia_calliptera
ENSAMEG00000011817	SPEN	96	82.123	ENSAMXG00000012485	spen	69	58.768	Astyanax_mexicanus
ENSAMEG00000011817	SPEN	100	89.065	ENSBTAG00000018729	SPEN	100	89.174	Bos_taurus
ENSAMEG00000011817	SPEN	100	87.027	ENSCJAG00000008527	SPEN	100	86.834	Callithrix_jacchus
ENSAMEG00000011817	SPEN	88	92.842	ENSCAFG00000016132	-	97	96.134	Canis_familiaris
ENSAMEG00000011817	SPEN	100	89.449	ENSCHIG00000025070	SPEN	100	89.558	Capra_hircus
ENSAMEG00000011817	SPEN	92	86.552	ENSTSYG00000036016	SPEN	99	86.556	Carlito_syrichta
ENSAMEG00000011817	SPEN	99	83.286	ENSCAPG00000013803	SPEN	100	80.027	Cavia_aperea
ENSAMEG00000011817	SPEN	99	80.839	ENSCPOG00000014036	SPEN	100	80.647	Cavia_porcellus
ENSAMEG00000011817	SPEN	100	82.751	ENSCCAG00000020258	SPEN	99	85.022	Cebus_capucinus
ENSAMEG00000011817	SPEN	95	98.519	ENSCATG00000015079	SPEN	99	97.794	Cercocebus_atys
ENSAMEG00000011817	SPEN	99	81.953	ENSCLAG00000002018	SPEN	100	81.788	Chinchilla_lanigera
ENSAMEG00000011817	SPEN	100	88.025	ENSCSAG00000000841	SPEN	100	87.696	Chlorocebus_sabaeus
ENSAMEG00000011817	SPEN	97	71.941	ENSCPBG00000010477	SPEN	100	71.994	Chrysemys_picta_bellii
ENSAMEG00000011817	SPEN	99	86.370	ENSCANG00000034547	SPEN	99	86.234	Colobus_angolensis_palliatus
ENSAMEG00000011817	SPEN	99	80.282	ENSCGRG00001007725	Spen	100	80.092	Cricetulus_griseus_chok1gshd
ENSAMEG00000011817	SPEN	99	79.428	ENSCGRG00000010581	Spen	100	78.937	Cricetulus_griseus_crigri
ENSAMEG00000011817	SPEN	68	83.146	ENSCSEG00000003915	-	99	45.596	Cynoglossus_semilaevis
ENSAMEG00000011817	SPEN	84	60.417	ENSCVAG00000009075	si:ch1073-335m2.2	68	84.795	Cyprinodon_variegatus
ENSAMEG00000011817	SPEN	96	45.676	ENSCVAG00000016346	-	69	56.789	Cyprinodon_variegatus
ENSAMEG00000011817	SPEN	72	67.089	ENSDARG00000074332	si:ch1073-335m2.2	67	74.000	Danio_rerio
ENSAMEG00000011817	SPEN	96	46.854	ENSDARG00000074245	spen	100	87.407	Danio_rerio
ENSAMEG00000011817	SPEN	100	87.025	ENSDNOG00000041948	SPEN	100	86.835	Dasypus_novemcinctus
ENSAMEG00000011817	SPEN	99	79.220	ENSDORG00000023909	Spen	99	79.470	Dipodomys_ordii
ENSAMEG00000011817	SPEN	67	97.479	ENSETEG00000016692	-	67	97.490	Echinops_telfairi
ENSAMEG00000011817	SPEN	96	98.519	ENSEASG00005015911	SPEN	99	98.519	Equus_asinus_asinus
ENSAMEG00000011817	SPEN	96	98.519	ENSECAG00000008833	SPEN	99	98.519	Equus_caballus
ENSAMEG00000011817	SPEN	71	95.349	ENSEEUG00000010255	SPEN	76	95.349	Erinaceus_europaeus
ENSAMEG00000011817	SPEN	73	80.328	ENSELUG00000007726	si:ch1073-335m2.2	82	80.328	Esox_lucius
ENSAMEG00000011817	SPEN	99	81.527	ENSFDAG00000010212	SPEN	100	81.724	Fukomys_damarensis
ENSAMEG00000011817	SPEN	87	82.456	ENSFHEG00000004544	si:ch1073-335m2.2	68	82.456	Fundulus_heteroclitus
ENSAMEG00000011817	SPEN	80	66.667	ENSGMOG00000008397	-	95	65.737	Gadus_morhua
ENSAMEG00000011817	SPEN	85	80.447	ENSGMOG00000008156	si:ch1073-335m2.2	68	80.447	Gadus_morhua
ENSAMEG00000011817	SPEN	96	45.404	ENSGAFG00000015819	-	91	73.408	Gambusia_affinis
ENSAMEG00000011817	SPEN	70	84.024	ENSGAFG00000021570	si:ch1073-335m2.2	77	84.024	Gambusia_affinis
ENSAMEG00000011817	SPEN	96	46.879	ENSGACG00000005341	-	70	58.140	Gasterosteus_aculeatus
ENSAMEG00000011817	SPEN	97	97.065	ENSGAGG00000020785	SPEN	100	97.065	Gopherus_agassizii
ENSAMEG00000011817	SPEN	100	88.243	ENSGGOG00000012041	SPEN	100	88.077	Gorilla_gorilla
ENSAMEG00000011817	SPEN	96	80.337	ENSHBUG00000020626	-	69	56.898	Haplochromis_burtoni
ENSAMEG00000011817	SPEN	81	84.211	ENSHBUG00000023253	si:ch1073-335m2.2	69	84.211	Haplochromis_burtoni
ENSAMEG00000011817	SPEN	100	81.544	ENSHGLG00000019259	SPEN	100	81.309	Heterocephalus_glaber_female
ENSAMEG00000011817	SPEN	88	84.860	ENSHGLG00100019294	SPEN	89	92.959	Heterocephalus_glaber_male
ENSAMEG00000011817	SPEN	75	65.730	ENSHCOG00000006004	si:ch1073-335m2.2	64	81.250	Hippocampus_comes
ENSAMEG00000011817	SPEN	77	73.684	ENSIPUG00000018212	si:ch1073-335m2.2	67	73.684	Ictalurus_punctatus
ENSAMEG00000011817	SPEN	96	81.667	ENSIPUG00000021668	spen	69	80.874	Ictalurus_punctatus
ENSAMEG00000011817	SPEN	99	86.590	ENSSTOG00000021428	SPEN	100	87.490	Ictidomys_tridecemlineatus
ENSAMEG00000011817	SPEN	100	82.218	ENSJJAG00000010882	Spen	100	82.375	Jaculus_jaculus
ENSAMEG00000011817	SPEN	72	83.041	ENSKMAG00000021725	si:ch1073-335m2.2	68	83.041	Kryptolebias_marmoratus
ENSAMEG00000011817	SPEN	96	79.775	ENSKMAG00000003882	-	69	56.000	Kryptolebias_marmoratus
ENSAMEG00000011817	SPEN	73	72.000	ENSLBEG00000020855	si:ch1073-335m2.2	60	81.065	Labrus_bergylta
ENSAMEG00000011817	SPEN	83	41.183	ENSLBEG00000019129	-	64	46.987	Labrus_bergylta
ENSAMEG00000011817	SPEN	83	96.273	ENSLACG00000003258	SPEN	90	96.273	Latimeria_chalumnae
ENSAMEG00000011817	SPEN	100	52.620	ENSLOCG00000007896	si:ch1073-335m2.2	70	66.667	Lepisosteus_oculatus
ENSAMEG00000011817	SPEN	99	87.172	ENSLAFG00000004524	SPEN	99	87.336	Loxodonta_africana
ENSAMEG00000011817	SPEN	100	87.656	ENSMFAG00000041974	SPEN	100	87.625	Macaca_fascicularis
ENSAMEG00000011817	SPEN	100	87.903	ENSMMUG00000008026	SPEN	100	87.765	Macaca_mulatta
ENSAMEG00000011817	SPEN	100	87.656	ENSMNEG00000042402	SPEN	100	87.625	Macaca_nemestrina
ENSAMEG00000011817	SPEN	100	87.412	ENSMLEG00000039293	SPEN	99	87.273	Mandrillus_leucophaeus
ENSAMEG00000011817	SPEN	89	73.171	ENSMAMG00000023870	si:ch1073-335m2.2	75	83.832	Mastacembelus_armatus
ENSAMEG00000011817	SPEN	64	84.211	ENSMZEG00005011762	si:ch1073-335m2.2	67	84.211	Maylandia_zebra
ENSAMEG00000011817	SPEN	87	42.523	ENSMZEG00005021491	-	65	53.781	Maylandia_zebra
ENSAMEG00000011817	SPEN	98	82.560	ENSMAUG00000008318	Spen	100	78.020	Mesocricetus_auratus
ENSAMEG00000011817	SPEN	100	88.311	ENSMICG00000030994	SPEN	100	88.093	Microcebus_murinus
ENSAMEG00000011817	SPEN	100	80.119	ENSMOCG00000016083	Spen	100	80.211	Microtus_ochrogaster
ENSAMEG00000011817	SPEN	97	70.994	ENSMODG00000003411	SPEN	100	70.737	Monodelphis_domestica
ENSAMEG00000011817	SPEN	96	80.899	ENSMALG00000008625	-	69	57.286	Monopterus_albus
ENSAMEG00000011817	SPEN	100	79.236	MGP_CAROLIEiJ_G0026745	Spen	100	79.350	Mus_caroli
ENSAMEG00000011817	SPEN	100	78.933	ENSMUSG00000040761	Spen	100	79.167	Mus_musculus
ENSAMEG00000011817	SPEN	100	78.618	MGP_PahariEiJ_G0029076	Spen	100	78.846	Mus_pahari
ENSAMEG00000011817	SPEN	100	79.296	MGP_SPRETEiJ_G0027724	Spen	100	79.410	Mus_spretus
ENSAMEG00000011817	SPEN	98	93.779	ENSMPUG00000016317	SPEN	100	93.835	Mustela_putorius_furo
ENSAMEG00000011817	SPEN	94	88.663	ENSMLUG00000010144	SPEN	99	94.129	Myotis_lucifugus
ENSAMEG00000011817	SPEN	100	77.799	ENSNGAG00000000641	Spen	95	84.031	Nannospalax_galili
ENSAMEG00000011817	SPEN	55	84.211	ENSNBRG00000005733	si:ch1073-335m2.2	64	84.211	Neolamprologus_brichardi
ENSAMEG00000011817	SPEN	80	68.145	ENSNBRG00000022090	-	62	67.742	Neolamprologus_brichardi
ENSAMEG00000011817	SPEN	99	87.868	ENSNLEG00000007652	SPEN	99	87.704	Nomascus_leucogenys
ENSAMEG00000011817	SPEN	86	93.750	ENSMEUG00000002422	SPEN	90	93.750	Notamacropus_eugenii
ENSAMEG00000011817	SPEN	93	89.890	ENSOPRG00000015800	SPEN	93	89.890	Ochotona_princeps
ENSAMEG00000011817	SPEN	100	80.287	ENSODEG00000016644	SPEN	100	79.563	Octodon_degus
ENSAMEG00000011817	SPEN	93	67.742	ENSONIG00000006573	-	99	80.909	Oreochromis_niloticus
ENSAMEG00000011817	SPEN	99	83.103	ENSOCUG00000010840	SPEN	99	82.832	Oryctolagus_cuniculus
ENSAMEG00000011817	SPEN	68	81.667	ENSORLG00000028894	-	89	81.667	Oryzias_latipes
ENSAMEG00000011817	SPEN	82	81.667	ENSORLG00020007735	-	63	81.667	Oryzias_latipes_hni
ENSAMEG00000011817	SPEN	93	81.667	ENSORLG00015022085	-	67	81.667	Oryzias_latipes_hsok
ENSAMEG00000011817	SPEN	70	81.988	ENSORLG00015005537	si:ch1073-335m2.2	82	81.988	Oryzias_latipes_hsok
ENSAMEG00000011817	SPEN	86	83.908	ENSOMEG00000007639	-	91	83.908	Oryzias_melastigma
ENSAMEG00000011817	SPEN	70	82.209	ENSOMEG00000004509	si:ch1073-335m2.2	86	81.871	Oryzias_melastigma
ENSAMEG00000011817	SPEN	100	87.911	ENSOGAG00000025110	SPEN	100	87.857	Otolemur_garnettii
ENSAMEG00000011817	SPEN	99	88.674	ENSOARG00000008477	SPEN	99	88.783	Ovis_aries
ENSAMEG00000011817	SPEN	99	88.074	ENSPPAG00000035690	SPEN	100	87.965	Pan_paniscus
ENSAMEG00000011817	SPEN	100	88.111	ENSPTRG00000000210	SPEN	100	88.002	Pan_troglodytes
ENSAMEG00000011817	SPEN	100	86.706	ENSPANG00000006293	SPEN	100	86.567	Papio_anubis
ENSAMEG00000011817	SPEN	87	52.337	ENSPKIG00000002617	SPEN	91	80.370	Paramormyrops_kingsleyae
ENSAMEG00000011817	SPEN	94	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	67	92.857	Paramormyrops_kingsleyae
ENSAMEG00000011817	SPEN	96	69.593	ENSPSIG00000008026	SPEN	100	69.470	Pelodiscus_sinensis
ENSAMEG00000011817	SPEN	99	80.513	ENSPEMG00000022997	Spen	100	80.300	Peromyscus_maniculatus_bairdii
ENSAMEG00000011817	SPEN	56	85.207	ENSPFOG00000017986	si:ch1073-335m2.2	64	85.207	Poecilia_formosa
ENSAMEG00000011817	SPEN	69	85.207	ENSPLAG00000016625	si:ch1073-335m2.2	64	85.207	Poecilia_latipinna
ENSAMEG00000011817	SPEN	96	45.048	ENSPMEG00000006764	-	91	73.034	Poecilia_mexicana
ENSAMEG00000011817	SPEN	78	85.207	ENSPREG00000005357	si:ch1073-335m2.2	64	85.207	Poecilia_reticulata
ENSAMEG00000011817	SPEN	96	45.486	ENSPREG00000010399	-	91	73.408	Poecilia_reticulata
ENSAMEG00000011817	SPEN	100	88.515	ENSPPYG00000001834	SPEN	100	88.403	Pongo_abelii
ENSAMEG00000011817	SPEN	88	91.459	ENSPCAG00000009543	SPEN	92	88.889	Procavia_capensis
ENSAMEG00000011817	SPEN	100	87.636	ENSPCOG00000021735	SPEN	100	87.473	Propithecus_coquereli
ENSAMEG00000011817	SPEN	84	95.915	ENSPVAG00000013794	SPEN	84	95.939	Pteropus_vampyrus
ENSAMEG00000011817	SPEN	96	80.337	ENSPNYG00000012379	-	69	56.898	Pundamilia_nyererei
ENSAMEG00000011817	SPEN	64	84.211	ENSPNYG00000009042	si:ch1073-335m2.2	67	84.211	Pundamilia_nyererei
ENSAMEG00000011817	SPEN	81	79.545	ENSPNAG00000011452	si:ch1073-335m2.2	68	79.545	Pygocentrus_nattereri
ENSAMEG00000011817	SPEN	96	83.051	ENSPNAG00000020795	spen	86	77.444	Pygocentrus_nattereri
ENSAMEG00000011817	SPEN	99	79.383	ENSRNOG00000033556	Spen	100	79.274	Rattus_norvegicus
ENSAMEG00000011817	SPEN	99	88.251	ENSRBIG00000039654	SPEN	100	88.083	Rhinopithecus_bieti
ENSAMEG00000011817	SPEN	99	87.909	ENSRROG00000035686	SPEN	100	87.628	Rhinopithecus_roxellana
ENSAMEG00000011817	SPEN	99	85.452	ENSSBOG00000028770	SPEN	99	85.228	Saimiri_boliviensis_boliviensis
ENSAMEG00000011817	SPEN	72	70.794	ENSSHAG00000004960	SPEN	98	94.444	Sarcophilus_harrisii
ENSAMEG00000011817	SPEN	84	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	Scleropages_formosus
ENSAMEG00000011817	SPEN	85	84.211	ENSSFOG00015010267	si:ch1073-335m2.2	92	84.211	Scleropages_formosus
ENSAMEG00000011817	SPEN	96	80.899	ENSSMAG00000008996	-	69	57.236	Scophthalmus_maximus
ENSAMEG00000011817	SPEN	83	76.142	ENSSMAG00000000125	si:ch1073-335m2.2	68	78.804	Scophthalmus_maximus
ENSAMEG00000011817	SPEN	96	81.461	ENSSDUG00000003476	-	91	75.093	Seriola_dumerili
ENSAMEG00000011817	SPEN	79	83.626	ENSSDUG00000008416	si:ch1073-335m2.2	64	83.626	Seriola_dumerili
ENSAMEG00000011817	SPEN	76	83.626	ENSSLDG00000023347	si:ch1073-335m2.2	51	83.626	Seriola_lalandi_dorsalis
ENSAMEG00000011817	SPEN	96	81.461	ENSSLDG00000012950	-	91	75.093	Seriola_lalandi_dorsalis
ENSAMEG00000011817	SPEN	86	67.475	ENSSPUG00000001866	-	100	67.588	Sphenodon_punctatus
ENSAMEG00000011817	SPEN	86	80.337	ENSSPAG00000006014	-	91	74.157	Stegastes_partitus
ENSAMEG00000011817	SPEN	81	76.000	ENSSPAG00000012454	si:ch1073-335m2.2	65	76.923	Stegastes_partitus
ENSAMEG00000011817	SPEN	86	89.882	ENSSSCG00000034484	SPEN	99	89.634	Sus_scrofa
ENSAMEG00000011817	SPEN	65	74.619	ENSTRUG00000021008	si:ch1073-335m2.2	63	80.226	Takifugu_rubripes
ENSAMEG00000011817	SPEN	96	44.203	ENSTRUG00000024350	-	70	56.649	Takifugu_rubripes
ENSAMEG00000011817	SPEN	93	77.312	ENSTNIG00000010907	-	70	77.559	Tetraodon_nigroviridis
ENSAMEG00000011817	SPEN	77	93.925	ENSTBEG00000003628	SPEN	77	97.436	Tupaia_belangeri
ENSAMEG00000011817	SPEN	79	95.751	ENSTTRG00000015704	SPEN	79	95.751	Tursiops_truncatus
ENSAMEG00000011817	SPEN	100	97.714	ENSUAMG00000009600	SPEN	100	97.714	Ursus_americanus
ENSAMEG00000011817	SPEN	100	95.959	ENSUMAG00000021641	SPEN	100	95.959	Ursus_maritimus
ENSAMEG00000011817	SPEN	96	98.519	ENSVVUG00000028951	SPEN	99	98.519	Vulpes_vulpes
ENSAMEG00000011817	SPEN	97	57.566	ENSXETG00000023114	SPEN	99	57.599	Xenopus_tropicalis
ENSAMEG00000011817	SPEN	66	84.024	ENSXCOG00000004516	si:ch1073-335m2.2	75	84.024	Xiphophorus_couchianus
ENSAMEG00000011817	SPEN	96	44.997	ENSXMAG00000021384	-	90	71.698	Xiphophorus_maculatus
ENSAMEG00000011817	SPEN	73	59.516	ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	Xiphophorus_maculatus