EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000011998 (Gene tree)
Gene ID: 100477607
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 67322 bases
Position: chrGL194156.1:244977-312298
Accession: 100477607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000012659	Npa1	PF11707.8	5.6e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000013195	URB1-201	6816	XM_002929345	ENSAMEP00000012659	2272 (aa)	XP_002929391	G1LZZ9

Gene Model

Click here to download ENSAMEG00000011998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000011998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000011998	URB1	99	82.501	ENSG00000142207	URB1	100	82.306	Homo_sapiens
ENSAMEG00000011998	URB1	96	48.196	ENSAPOG00000020308	urb1	99	43.000	Acanthochromis_polyacanthus
ENSAMEG00000011998	URB1	96	44.777	ENSACIG00000003248	urb1	98	44.596	Amphilophus_citrinellus
ENSAMEG00000011998	URB1	99	41.358	ENSAOCG00000010364	urb1	99	41.358	Amphiprion_ocellaris
ENSAMEG00000011998	URB1	97	52.892	ENSAPEG00000010758	urb1	99	52.892	Amphiprion_percula
ENSAMEG00000011998	URB1	98	44.936	ENSATEG00000011790	urb1	97	44.931	Anabas_testudineus
ENSAMEG00000011998	URB1	97	56.182	ENSAPLG00000012791	URB1	100	56.137	Anas_platyrhynchos
ENSAMEG00000011998	URB1	99	51.658	ENSACAG00000002817	URB1	99	51.831	Anolis_carolinensis
ENSAMEG00000011998	URB1	99	81.390	ENSANAG00000024617	URB1	100	81.346	Aotus_nancymaae
ENSAMEG00000011998	URB1	99	45.035	ENSACLG00000024865	urb1	99	44.551	Astatotilapia_calliptera
ENSAMEG00000011998	URB1	99	39.710	ENSAMXG00000012306	urb1	99	39.640	Astyanax_mexicanus
ENSAMEG00000011998	URB1	99	79.684	ENSBTAG00000012412	URB1	99	79.772	Bos_taurus
ENSAMEG00000011998	URB1	99	81.371	ENSCJAG00000009118	URB1	100	81.327	Callithrix_jacchus
ENSAMEG00000011998	URB1	99	88.757	ENSCAFG00000008892	URB1	100	88.757	Canis_familiaris
ENSAMEG00000011998	URB1	99	87.539	ENSCAFG00020025994	-	100	87.494	Canis_lupus_dingo
ENSAMEG00000011998	URB1	99	88.463	ENSCAFG00020025987	-	100	88.463	Canis_lupus_dingo
ENSAMEG00000011998	URB1	99	78.982	ENSCHIG00000015645	URB1	99	78.982	Capra_hircus
ENSAMEG00000011998	URB1	99	80.766	ENSTSYG00000013286	URB1	100	80.678	Carlito_syrichta
ENSAMEG00000011998	URB1	98	75.349	ENSCAPG00000015589	URB1	99	75.349	Cavia_aperea
ENSAMEG00000011998	URB1	99	76.673	ENSCPOG00000006748	URB1	99	76.673	Cavia_porcellus
ENSAMEG00000011998	URB1	99	81.998	ENSCCAG00000021299	URB1	100	82.042	Cebus_capucinus
ENSAMEG00000011998	URB1	99	81.778	ENSCATG00000042630	URB1	100	81.734	Cercocebus_atys
ENSAMEG00000011998	URB1	99	78.462	ENSCLAG00000005262	URB1	100	78.374	Chinchilla_lanigera
ENSAMEG00000011998	URB1	99	79.711	ENSCSAG00000009584	URB1	100	79.667	Chlorocebus_sabaeus
ENSAMEG00000011998	URB1	99	58.344	ENSCPBG00000006454	URB1	99	58.257	Chrysemys_picta_bellii
ENSAMEG00000011998	URB1	99	81.558	ENSCANG00000031088	URB1	100	81.514	Colobus_angolensis_palliatus
ENSAMEG00000011998	URB1	98	75.100	ENSCGRG00001010616	Urb1	99	74.890	Cricetulus_griseus_chok1gshd
ENSAMEG00000011998	URB1	97	74.730	ENSCGRG00000015840	Urb1	99	74.730	Cricetulus_griseus_crigri
ENSAMEG00000011998	URB1	97	48.889	ENSCSEG00000012616	urb1	99	48.889	Cynoglossus_semilaevis
ENSAMEG00000011998	URB1	96	55.709	ENSCVAG00000009076	urb1	96	55.709	Cyprinodon_variegatus
ENSAMEG00000011998	URB1	99	43.440	ENSDARG00000060308	urb1	99	43.308	Danio_rerio
ENSAMEG00000011998	URB1	85	80.269	ENSDNOG00000015586	URB1	99	80.269	Dasypus_novemcinctus
ENSAMEG00000011998	URB1	99	77.553	ENSDORG00000006735	Urb1	100	77.465	Dipodomys_ordii
ENSAMEG00000011998	URB1	92	80.000	ENSETEG00000009080	URB1	92	80.000	Echinops_telfairi
ENSAMEG00000011998	URB1	99	83.260	ENSEASG00005007711	URB1	100	83.260	Equus_asinus_asinus
ENSAMEG00000011998	URB1	97	91.827	ENSECAG00000013206	URB1	99	92.635	Equus_caballus
ENSAMEG00000011998	URB1	58	85.000	ENSEEUG00000003626	-	55	85.000	Erinaceus_europaeus
ENSAMEG00000011998	URB1	99	44.787	ENSELUG00000020516	urb1	99	44.703	Esox_lucius
ENSAMEG00000011998	URB1	99	86.211	ENSFCAG00000002177	URB1	100	86.211	Felis_catus
ENSAMEG00000011998	URB1	97	50.817	ENSFALG00000004636	URB1	99	50.597	Ficedula_albicollis
ENSAMEG00000011998	URB1	99	77.997	ENSFDAG00000007288	URB1	95	77.910	Fukomys_damarensis
ENSAMEG00000011998	URB1	99	41.950	ENSFHEG00000000202	urb1	99	42.921	Fundulus_heteroclitus
ENSAMEG00000011998	URB1	92	47.695	ENSGMOG00000001838	urb1	93	47.695	Gadus_morhua
ENSAMEG00000011998	URB1	99	55.986	ENSGALG00000015887	URB1	99	55.942	Gallus_gallus
ENSAMEG00000011998	URB1	94	52.604	ENSGAFG00000020694	urb1	98	52.604	Gambusia_affinis
ENSAMEG00000011998	URB1	98	45.319	ENSGACG00000011703	urb1	99	45.158	Gasterosteus_aculeatus
ENSAMEG00000011998	URB1	99	57.771	ENSGAGG00000022544	URB1	99	57.640	Gopherus_agassizii
ENSAMEG00000011998	URB1	99	82.350	ENSGGOG00000000285	URB1	100	82.306	Gorilla_gorilla
ENSAMEG00000011998	URB1	99	45.007	ENSHBUG00000001904	urb1	99	44.638	Haplochromis_burtoni
ENSAMEG00000011998	URB1	99	76.810	ENSHGLG00000004907	URB1	99	76.723	Heterocephalus_glaber_female
ENSAMEG00000011998	URB1	99	77.383	ENSHGLG00100010749	URB1	99	77.295	Heterocephalus_glaber_male
ENSAMEG00000011998	URB1	71	52.031	ENSHCOG00000018683	urb1	97	52.998	Hippocampus_comes
ENSAMEG00000011998	URB1	99	40.731	ENSIPUG00000014721	urb1	99	40.555	Ictalurus_punctatus
ENSAMEG00000011998	URB1	99	79.429	ENSSTOG00000004539	URB1	100	79.341	Ictidomys_tridecemlineatus
ENSAMEG00000011998	URB1	99	41.557	ENSKMAG00000006001	urb1	99	47.649	Kryptolebias_marmoratus
ENSAMEG00000011998	URB1	97	41.933	ENSLBEG00000027208	urb1	99	51.895	Labrus_bergylta
ENSAMEG00000011998	URB1	99	48.055	ENSLACG00000017059	URB1	100	48.012	Latimeria_chalumnae
ENSAMEG00000011998	URB1	98	46.339	ENSLOCG00000009190	urb1	99	46.178	Lepisosteus_oculatus
ENSAMEG00000011998	URB1	99	78.227	ENSLAFG00000010407	URB1	99	78.183	Loxodonta_africana
ENSAMEG00000011998	URB1	99	81.646	ENSMFAG00000034391	URB1	97	81.602	Macaca_fascicularis
ENSAMEG00000011998	URB1	99	81.382	ENSMMUG00000010295	URB1	100	81.338	Macaca_mulatta
ENSAMEG00000011998	URB1	99	80.238	ENSMNEG00000032981	URB1	100	80.194	Macaca_nemestrina
ENSAMEG00000011998	URB1	99	81.778	ENSMLEG00000041435	URB1	100	81.734	Mandrillus_leucophaeus
ENSAMEG00000011998	URB1	99	42.969	ENSMAMG00000011238	urb1	99	42.476	Mastacembelus_armatus
ENSAMEG00000011998	URB1	99	40.533	ENSMZEG00005011862	urb1	99	40.320	Maylandia_zebra
ENSAMEG00000011998	URB1	98	56.253	ENSMGAG00000014512	URB1	99	56.208	Meleagris_gallopavo
ENSAMEG00000011998	URB1	93	79.416	ENSMAUG00000010516	Urb1	99	79.708	Mesocricetus_auratus
ENSAMEG00000011998	URB1	99	80.713	ENSMICG00000016424	URB1	99	80.669	Microcebus_murinus
ENSAMEG00000011998	URB1	99	72.795	ENSMOCG00000012613	Urb1	99	72.795	Microtus_ochrogaster
ENSAMEG00000011998	URB1	99	63.361	ENSMODG00000021076	URB1	99	63.361	Monodelphis_domestica
ENSAMEG00000011998	URB1	99	42.563	ENSMALG00000017411	urb1	99	52.687	Monopterus_albus
ENSAMEG00000011998	URB1	99	73.592	MGP_CAROLIEiJ_G0020948	Urb1	99	73.592	Mus_caroli
ENSAMEG00000011998	URB1	99	73.592	ENSMUSG00000039929	Urb1	99	73.592	Mus_musculus
ENSAMEG00000011998	URB1	99	73.636	MGP_PahariEiJ_G0016653	Urb1	99	73.636	Mus_pahari
ENSAMEG00000011998	URB1	99	73.415	MGP_SPRETEiJ_G0021854	Urb1	99	73.415	Mus_spretus
ENSAMEG00000011998	URB1	99	87.930	ENSMPUG00000001123	URB1	100	87.930	Mustela_putorius_furo
ENSAMEG00000011998	URB1	99	74.483	ENSNGAG00000001905	Urb1	99	74.307	Nannospalax_galili
ENSAMEG00000011998	URB1	82	44.946	ENSNBRG00000001049	urb1	99	44.835	Neolamprologus_brichardi
ENSAMEG00000011998	URB1	99	79.982	ENSNLEG00000026872	URB1	100	79.886	Nomascus_leucogenys
ENSAMEG00000011998	URB1	96	58.200	ENSMEUG00000010828	URB1	96	58.269	Notamacropus_eugenii
ENSAMEG00000011998	URB1	99	73.099	ENSOPRG00000013482	URB1	99	73.099	Ochotona_princeps
ENSAMEG00000011998	URB1	99	76.967	ENSODEG00000002587	URB1	99	76.879	Octodon_degus
ENSAMEG00000011998	URB1	99	45.096	ENSONIG00000005599	urb1	99	45.096	Oreochromis_niloticus
ENSAMEG00000011998	URB1	99	78.811	ENSOCUG00000009381	URB1	99	78.811	Oryctolagus_cuniculus
ENSAMEG00000011998	URB1	99	44.173	ENSORLG00000003429	urb1	99	44.148	Oryzias_latipes
ENSAMEG00000011998	URB1	99	44.038	ENSORLG00020013785	urb1	99	43.927	Oryzias_latipes_hni
ENSAMEG00000011998	URB1	99	42.770	ENSORLG00015019421	urb1	98	49.300	Oryzias_latipes_hsok
ENSAMEG00000011998	URB1	78	52.241	ENSOMEG00000002094	urb1	97	52.241	Oryzias_melastigma
ENSAMEG00000011998	URB1	99	80.529	ENSOGAG00000017140	URB1	100	80.352	Otolemur_garnettii
ENSAMEG00000011998	URB1	97	79.864	ENSOARG00000013679	URB1	99	79.609	Ovis_aries
ENSAMEG00000011998	URB1	99	82.482	ENSPPAG00000003423	URB1	100	82.438	Pan_paniscus
ENSAMEG00000011998	URB1	99	86.476	ENSPPRG00000023131	URB1	100	86.476	Panthera_pardus
ENSAMEG00000011998	URB1	92	85.052	ENSPTIG00000016125	URB1	97	85.104	Panthera_tigris_altaica
ENSAMEG00000011998	URB1	99	82.350	ENSPTRG00000013852	URB1	100	82.306	Pan_troglodytes
ENSAMEG00000011998	URB1	99	81.778	ENSPANG00000021964	URB1	100	81.734	Papio_anubis
ENSAMEG00000011998	URB1	98	46.195	ENSPKIG00000003683	urb1	98	46.297	Paramormyrops_kingsleyae
ENSAMEG00000011998	URB1	100	73.980	ENSPEMG00000021205	Urb1	99	73.980	Peromyscus_maniculatus_bairdii
ENSAMEG00000011998	URB1	79	34.305	ENSPMAG00000009733	URB1	99	34.526	Petromyzon_marinus
ENSAMEG00000011998	URB1	99	63.130	ENSPCIG00000016350	URB1	99	63.493	Phascolarctos_cinereus
ENSAMEG00000011998	URB1	96	43.600	ENSPLAG00000004371	urb1	99	43.504	Poecilia_latipinna
ENSAMEG00000011998	URB1	99	43.953	ENSPMEG00000006634	urb1	99	43.816	Poecilia_mexicana
ENSAMEG00000011998	URB1	99	44.123	ENSPREG00000013453	urb1	99	44.030	Poecilia_reticulata
ENSAMEG00000011998	URB1	99	81.706	ENSPPYG00000011359	URB1	100	81.470	Pongo_abelii
ENSAMEG00000011998	URB1	99	67.417	ENSPCAG00000007430	URB1	99	67.373	Procavia_capensis
ENSAMEG00000011998	URB1	99	81.550	ENSPCOG00000022695	URB1	100	81.594	Propithecus_coquereli
ENSAMEG00000011998	URB1	99	81.366	ENSPVAG00000000889	URB1	100	81.366	Pteropus_vampyrus
ENSAMEG00000011998	URB1	99	43.979	ENSPNYG00000010589	urb1	99	43.750	Pundamilia_nyererei
ENSAMEG00000011998	URB1	99	40.308	ENSPNAG00000019324	urb1	99	40.203	Pygocentrus_nattereri
ENSAMEG00000011998	URB1	99	73.295	ENSRNOG00000002080	Urb1	99	73.471	Rattus_norvegicus
ENSAMEG00000011998	URB1	99	81.162	ENSRBIG00000033122	URB1	100	81.118	Rhinopithecus_bieti
ENSAMEG00000011998	URB1	99	81.030	ENSRROG00000040237	URB1	100	80.986	Rhinopithecus_roxellana
ENSAMEG00000011998	URB1	99	81.522	ENSSBOG00000027672	URB1	100	81.478	Saimiri_boliviensis_boliviensis
ENSAMEG00000011998	URB1	99	63.075	ENSSHAG00000005140	URB1	100	63.075	Sarcophilus_harrisii
ENSAMEG00000011998	URB1	93	46.208	ENSSFOG00015000339	urb1	99	46.059	Scleropages_formosus
ENSAMEG00000011998	URB1	99	44.440	ENSSMAG00000003782	urb1	99	44.615	Scophthalmus_maximus
ENSAMEG00000011998	URB1	99	45.048	ENSSDUG00000012313	urb1	99	44.913	Seriola_dumerili
ENSAMEG00000011998	URB1	99	44.961	ENSSLDG00000023179	urb1	99	44.826	Seriola_lalandi_dorsalis
ENSAMEG00000011998	URB1	99	54.989	ENSSPUG00000012447	URB1	99	55.009	Sphenodon_punctatus
ENSAMEG00000011998	URB1	99	44.038	ENSSPAG00000006325	urb1	99	43.951	Stegastes_partitus
ENSAMEG00000011998	URB1	99	80.730	ENSSSCG00000032024	URB1	100	80.554	Sus_scrofa
ENSAMEG00000011998	URB1	73	57.203	ENSTGUG00000013442	URB1	100	57.143	Taeniopygia_guttata
ENSAMEG00000011998	URB1	99	43.431	ENSTRUG00000009372	urb1	99	43.088	Takifugu_rubripes
ENSAMEG00000011998	URB1	99	43.453	ENSTNIG00000016277	urb1	99	43.140	Tetraodon_nigroviridis
ENSAMEG00000011998	URB1	81	84.058	ENSTBEG00000010044	URB1	81	84.058	Tupaia_belangeri
ENSAMEG00000011998	URB1	90	82.827	ENSTTRG00000007712	URB1	92	82.827	Tursiops_truncatus
ENSAMEG00000011998	URB1	100	96.347	ENSUAMG00000012231	URB1	99	96.347	Ursus_americanus
ENSAMEG00000011998	URB1	95	94.691	ENSUMAG00000017419	URB1	99	96.774	Ursus_maritimus
ENSAMEG00000011998	URB1	68	91.270	ENSVPAG00000001164	URB1	68	91.270	Vicugna_pacos
ENSAMEG00000011998	URB1	99	88.077	ENSVVUG00000000551	URB1	100	88.077	Vulpes_vulpes
ENSAMEG00000011998	URB1	99	49.546	ENSXETG00000009895	urb1	99	49.375	Xenopus_tropicalis
ENSAMEG00000011998	URB1	99	41.553	ENSXCOG00000005500	urb1	97	45.947	Xiphophorus_couchianus
ENSAMEG00000011998	URB1	99	41.414	ENSXMAG00000007253	urb1	97	45.919	Xiphophorus_maculatus