EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000012006 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: FLJ90396
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 3085 bases
Position: chrGL192799.1:82138-85222
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	1	10
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	2	10
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	3	10
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	4	10
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	5	10
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	6	10
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	7	10
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	8	10
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	9	10
ENSAMEP00000012635	zf-C2H2	PF00096.26	3e-56	10	10
ENSAMEP00000012637	zf-C2H2	PF00096.26	1.2e-54	1	9
ENSAMEP00000012637	zf-C2H2	PF00096.26	1.2e-54	2	9
ENSAMEP00000012637	zf-C2H2	PF00096.26	1.2e-54	3	9
ENSAMEP00000012637	zf-C2H2	PF00096.26	1.2e-54	4	9
ENSAMEP00000012637	zf-C2H2	PF00096.26	1.2e-54	5	9
ENSAMEP00000012637	zf-C2H2	PF00096.26	1.2e-54	6	9
ENSAMEP00000012637	zf-C2H2	PF00096.26	1.2e-54	7	9
ENSAMEP00000012637	zf-C2H2	PF00096.26	1.2e-54	8	9
ENSAMEP00000012637	zf-C2H2	PF00096.26	1.2e-54	9	9
ENSAMEP00000012637	zf-met	PF12874.7	2.7e-08	1	2
ENSAMEP00000012637	zf-met	PF12874.7	2.7e-08	2	2
ENSAMEP00000012635	zf-met	PF12874.7	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000013170	-	1623	-	ENSAMEP00000012635	540 (aa)	-	G1LZX5
ENSAMET00000013172	-	1494	-	ENSAMEP00000012637	498 (aa)	-	G1LZX7

Gene Model

Click here to download ENSAMEG00000012006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000012006's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000012006	-	92	44.880	ENSAMEG00000007308	ZNF668	95	46.182
ENSAMEG00000012006	-	99	48.029	ENSAMEG00000002368	-	97	48.029
ENSAMEG00000012006	-	91	39.552	ENSAMEG00000005557	CPSF1	77	39.552
ENSAMEG00000012006	-	84	37.975	ENSAMEG00000006481	ZNF423	89	37.975
ENSAMEG00000012006	-	99	46.465	ENSAMEG00000008136	ZNF317	98	46.465
ENSAMEG00000012006	-	99	44.523	ENSAMEG00000006122	ZNF233	99	44.710
ENSAMEG00000012006	-	84	39.806	ENSAMEG00000010549	ZNF236	61	41.333
ENSAMEG00000012006	-	99	53.250	ENSAMEG00000000176	ZNF599	99	53.250
ENSAMEG00000012006	-	84	40.238	ENSAMEG00000003482	ZNF628	58	40.238
ENSAMEG00000012006	-	99	48.485	ENSAMEG00000012925	ZNF112	99	48.301
ENSAMEG00000012006	-	92	33.571	ENSAMEG00000015824	GTF3A	82	33.571
ENSAMEG00000012006	-	84	46.018	ENSAMEG00000003802	-	100	38.244
ENSAMEG00000012006	-	85	34.500	ENSAMEG00000020255	ZNF574	95	36.165
ENSAMEG00000012006	-	84	38.140	ENSAMEG00000012387	ZNF652	51	36.744
ENSAMEG00000012006	-	82	37.198	ENSAMEG00000013237	ZFP64	51	40.217
ENSAMEG00000012006	-	99	44.917	ENSAMEG00000007611	-	99	51.532
ENSAMEG00000012006	-	84	31.727	ENSAMEG00000007074	PATZ1	53	31.727
ENSAMEG00000012006	-	86	52.027	ENSAMEG00000014454	-	99	52.027
ENSAMEG00000012006	-	88	35.613	ENSAMEG00000017202	ZNF319	95	35.613
ENSAMEG00000012006	-	99	43.284	ENSAMEG00000007292	ZNF646	100	34.706
ENSAMEG00000012006	-	82	43.137	ENSAMEG00000010206	SALL3	51	43.137
ENSAMEG00000012006	-	82	40.909	ENSAMEG00000013858	-	93	41.176
ENSAMEG00000012006	-	90	43.284	ENSAMEG00000009606	SNAI2	62	43.284
ENSAMEG00000012006	-	97	43.558	ENSAMEG00000001261	ZFP1	98	43.558
ENSAMEG00000012006	-	97	54.296	ENSAMEG00000009560	ZNF582	97	51.986
ENSAMEG00000012006	-	85	39.241	ENSAMEG00000014151	ZNF521	91	39.241
ENSAMEG00000012006	-	89	35.294	ENSAMEG00000016750	ZFAT	59	35.294
ENSAMEG00000012006	-	99	50.134	ENSAMEG00000012930	ZNF235	98	50.134
ENSAMEG00000012006	-	84	32.338	ENSAMEG00000003050	PRDM5	82	33.154
ENSAMEG00000012006	-	82	55.102	ENSAMEG00000013250	-	53	55.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000012006	-	99	57.784	ENSG00000196757	ZNF700	99	58.006	Homo_sapiens
ENSAMEG00000012006	-	89	52.265	ENSBTAG00000049339	-	96	50.347	Bos_taurus
ENSAMEG00000012006	-	94	94.832	ENSBTAG00000016721	-	99	94.832	Bos_taurus
ENSAMEG00000012006	-	86	56.444	ENSCJAG00000005453	-	99	56.444	Callithrix_jacchus
ENSAMEG00000012006	-	97	63.140	ENSCAFG00000032123	-	99	54.309	Canis_familiaris
ENSAMEG00000012006	-	100	96.593	ENSCAFG00000031471	-	97	96.593	Canis_familiaris
ENSAMEG00000012006	-	83	60.514	ENSCAFG00020005065	-	99	61.823	Canis_lupus_dingo
ENSAMEG00000012006	-	87	98.148	ENSCAFG00020005083	-	99	98.148	Canis_lupus_dingo
ENSAMEG00000012006	-	99	90.141	ENSCHIG00000008992	-	99	90.141	Capra_hircus
ENSAMEG00000012006	-	99	64.259	ENSCHIG00000020779	-	99	60.432	Capra_hircus
ENSAMEG00000012006	-	86	57.647	ENSCCAG00000024419	-	97	57.647	Cebus_capucinus
ENSAMEG00000012006	-	99	61.240	ENSCCAG00000027336	ZNF791	99	69.679	Cebus_capucinus
ENSAMEG00000012006	-	99	61.499	ENSCATG00000041735	ZNF791	99	69.076	Cercocebus_atys
ENSAMEG00000012006	-	100	57.186	ENSCATG00000025335	ZNF700	98	57.186	Cercocebus_atys
ENSAMEG00000012006	-	91	64.130	ENSCSAG00000006632	ZNF791	99	67.763	Chlorocebus_sabaeus
ENSAMEG00000012006	-	99	57.186	ENSCSAG00000006686	ZNF700	97	57.186	Chlorocebus_sabaeus
ENSAMEG00000012006	-	99	49.081	ENSCGRG00001001639	Zfp882	100	49.729	Cricetulus_griseus_chok1gshd
ENSAMEG00000012006	-	97	57.623	ENSCGRG00000013919	Zfp709	99	57.623	Cricetulus_griseus_crigri
ENSAMEG00000012006	-	86	60.917	ENSEASG00005004288	-	99	59.353	Equus_asinus_asinus
ENSAMEG00000012006	-	96	57.955	ENSEASG00005004284	-	99	56.422	Equus_asinus_asinus
ENSAMEG00000012006	-	89	59.517	ENSEASG00005014394	-	96	59.517	Equus_asinus_asinus
ENSAMEG00000012006	-	85	60.000	ENSEASG00005004225	-	99	59.302	Equus_asinus_asinus
ENSAMEG00000012006	-	90	59.055	ENSEASG00005004229	-	96	60.166	Equus_asinus_asinus
ENSAMEG00000012006	-	86	60.703	ENSEASG00005004242	-	89	62.539	Equus_asinus_asinus
ENSAMEG00000012006	-	87	53.543	ENSEASG00005004237	-	83	56.592	Equus_asinus_asinus
ENSAMEG00000012006	-	99	55.462	ENSEASG00005022060	-	99	55.370	Equus_asinus_asinus
ENSAMEG00000012006	-	85	64.052	ENSEASG00005011546	-	100	63.317	Equus_asinus_asinus
ENSAMEG00000012006	-	87	89.590	ENSECAG00000034536	-	91	89.590	Equus_caballus
ENSAMEG00000012006	-	86	62.500	ENSECAG00000018881	-	99	57.447	Equus_caballus
ENSAMEG00000012006	-	91	55.263	ENSECAG00000032997	-	98	55.333	Equus_caballus
ENSAMEG00000012006	-	87	57.208	ENSECAG00000009346	-	99	59.584	Equus_caballus
ENSAMEG00000012006	-	99	54.032	ENSECAG00000031831	-	99	55.364	Equus_caballus
ENSAMEG00000012006	-	93	59.813	ENSECAG00000024804	-	98	59.813	Equus_caballus
ENSAMEG00000012006	-	99	56.707	ENSECAG00000000636	-	97	57.576	Equus_caballus
ENSAMEG00000012006	-	87	53.893	ENSECAG00000018175	-	100	57.298	Equus_caballus
ENSAMEG00000012006	-	86	60.428	ENSECAG00000005497	-	99	61.443	Equus_caballus
ENSAMEG00000012006	-	98	55.415	ENSECAG00000036480	-	96	56.513	Equus_caballus
ENSAMEG00000012006	-	84	55.128	ENSEEUG00000013556	-	99	55.128	Erinaceus_europaeus
ENSAMEG00000012006	-	91	51.903	ENSEEUG00000008954	-	99	53.543	Erinaceus_europaeus
ENSAMEG00000012006	-	99	55.401	ENSEEUG00000009480	-	99	56.250	Erinaceus_europaeus
ENSAMEG00000012006	-	99	95.573	ENSFCAG00000039667	-	100	95.573	Felis_catus
ENSAMEG00000012006	-	98	58.084	ENSGGOG00000038420	ZNF700	97	58.084	Gorilla_gorilla
ENSAMEG00000012006	-	98	58.945	ENSGGOG00000011661	ZNF878	99	58.945	Gorilla_gorilla
ENSAMEG00000012006	-	99	56.533	ENSJJAG00000012972	Zfp709	100	56.533	Jaculus_jaculus
ENSAMEG00000012006	-	99	51.625	ENSJJAG00000014350	Zfp961	99	52.922	Jaculus_jaculus
ENSAMEG00000012006	-	99	61.499	ENSMFAG00000036181	ZNF791	99	69.076	Macaca_fascicularis
ENSAMEG00000012006	-	100	57.186	ENSMFAG00000034497	ZNF700	98	57.186	Macaca_fascicularis
ENSAMEG00000012006	-	100	61.499	ENSMMUG00000016862	ZNF791	99	68.800	Macaca_mulatta
ENSAMEG00000012006	-	100	57.186	ENSMMUG00000012587	ZNF700	98	57.186	Macaca_mulatta
ENSAMEG00000012006	-	99	55.556	ENSMNEG00000030711	ZNF700	99	56.250	Macaca_nemestrina
ENSAMEG00000012006	-	91	63.974	ENSMNEG00000045545	ZNF791	99	68.062	Macaca_nemestrina
ENSAMEG00000012006	-	99	61.499	ENSMLEG00000034449	ZNF791	99	69.014	Mandrillus_leucophaeus
ENSAMEG00000012006	-	98	50.162	ENSMAUG00000007713	Zfp868	99	50.162	Mesocricetus_auratus
ENSAMEG00000012006	-	98	49.097	ENSMAUG00000010647	Zfp882	100	53.149	Mesocricetus_auratus
ENSAMEG00000012006	-	98	58.156	ENSMICG00000044274	-	99	58.156	Microcebus_murinus
ENSAMEG00000012006	-	99	58.432	ENSMICG00000027210	-	96	58.670	Microcebus_murinus
ENSAMEG00000012006	-	99	58.876	ENSMICG00000042598	-	99	59.459	Microcebus_murinus
ENSAMEG00000012006	-	98	59.246	ENSMICG00000033630	-	99	59.246	Microcebus_murinus
ENSAMEG00000012006	-	100	47.651	ENSMOCG00000014774	Zfp961	97	48.355	Microtus_ochrogaster
ENSAMEG00000012006	-	98	50.510	ENSMOCG00000020165	Zfp101	98	50.510	Microtus_ochrogaster
ENSAMEG00000012006	-	97	65.116	MGP_CAROLIEiJ_G0016437	Zfp867	96	65.116	Mus_caroli
ENSAMEG00000012006	-	99	49.606	MGP_CAROLIEiJ_G0031203	Zfp882	99	50.000	Mus_caroli
ENSAMEG00000012006	-	98	58.270	ENSMUSG00000056019	Zfp709	99	58.270	Mus_musculus
ENSAMEG00000012006	-	97	64.729	ENSMUSG00000054519	Zfp867	96	64.729	Mus_musculus
ENSAMEG00000012006	-	99	49.606	ENSMUSG00000089857	Zfp882	99	50.182	Mus_musculus
ENSAMEG00000012006	-	97	63.953	MGP_PahariEiJ_G0017567	Zfp867	96	63.953	Mus_pahari
ENSAMEG00000012006	-	99	49.606	MGP_PahariEiJ_G0021668	Zfp882	99	50.000	Mus_pahari
ENSAMEG00000012006	-	98	64.729	MGP_SPRETEiJ_G0017272	Zfp867	96	64.729	Mus_spretus
ENSAMEG00000012006	-	99	97.189	ENSMPUG00000004877	-	99	97.189	Mustela_putorius_furo
ENSAMEG00000012006	-	99	57.480	ENSMPUG00000004901	-	99	56.295	Mustela_putorius_furo
ENSAMEG00000012006	-	99	80.522	ENSMLUG00000003693	-	100	80.522	Myotis_lucifugus
ENSAMEG00000012006	-	100	58.084	ENSNLEG00000012661	ZNF700	98	58.084	Nomascus_leucogenys
ENSAMEG00000012006	-	92	55.271	ENSOCUG00000029755	-	99	55.528	Oryctolagus_cuniculus
ENSAMEG00000012006	-	99	57.715	ENSOGAG00000002111	-	99	58.476	Otolemur_garnettii
ENSAMEG00000012006	-	99	89.960	ENSOARG00000012703	-	98	89.960	Ovis_aries
ENSAMEG00000012006	-	99	51.421	ENSOARG00000012765	-	99	50.329	Ovis_aries
ENSAMEG00000012006	-	95	94.737	ENSPPRG00000011201	-	100	94.737	Panthera_pardus
ENSAMEG00000012006	-	84	59.447	ENSPTIG00000009517	-	99	60.591	Panthera_tigris_altaica
ENSAMEG00000012006	-	99	94.769	ENSPTIG00000012277	-	100	94.769	Panthera_tigris_altaica
ENSAMEG00000012006	-	86	56.495	ENSPTIG00000009499	-	99	56.289	Panthera_tigris_altaica
ENSAMEG00000012006	-	98	57.784	ENSPTRG00000010515	ZNF700	97	57.784	Pan_troglodytes
ENSAMEG00000012006	-	100	57.485	ENSPANG00000004914	ZNF700	98	57.485	Papio_anubis
ENSAMEG00000012006	-	99	55.501	ENSPEMG00000022834	Zfp709	100	55.501	Peromyscus_maniculatus_bairdii
ENSAMEG00000012006	-	85	43.716	ENSPMAG00000006708	-	97	44.262	Petromyzon_marinus
ENSAMEG00000012006	-	98	68.102	ENSPPYG00000029413	-	97	66.265	Pongo_abelii
ENSAMEG00000012006	-	99	56.886	ENSPPYG00000009590	ZNF700	97	56.923	Pongo_abelii
ENSAMEG00000012006	-	99	61.290	ENSPPYG00000009596	ZNF791	99	66.129	Pongo_abelii
ENSAMEG00000012006	-	87	50.540	ENSPCAG00000007476	-	99	53.525	Procavia_capensis
ENSAMEG00000012006	-	93	54.398	ENSPCOG00000014758	-	99	56.686	Propithecus_coquereli
ENSAMEG00000012006	-	97	58.719	ENSPCOG00000025734	-	100	58.719	Propithecus_coquereli
ENSAMEG00000012006	-	99	62.703	ENSPCOG00000015720	ZNF791	100	68.675	Propithecus_coquereli
ENSAMEG00000012006	-	100	61.111	ENSPCOG00000024437	-	100	61.111	Propithecus_coquereli
ENSAMEG00000012006	-	99	90.361	ENSPVAG00000015563	-	100	90.361	Pteropus_vampyrus
ENSAMEG00000012006	-	91	57.097	ENSPVAG00000001626	-	100	57.556	Pteropus_vampyrus
ENSAMEG00000012006	-	97	79.032	ENSPVAG00000002257	-	89	79.032	Pteropus_vampyrus
ENSAMEG00000012006	-	99	58.859	ENSRNOG00000022431	Zfp867	97	66.260	Rattus_norvegicus
ENSAMEG00000012006	-	99	49.081	ENSRNOG00000016417	Zfp136	100	52.019	Rattus_norvegicus
ENSAMEG00000012006	-	98	59.847	ENSRBIG00000043636	ZNF700	99	59.847	Rhinopithecus_bieti
ENSAMEG00000012006	-	87	56.782	ENSRBIG00000041827	ZNF878	99	56.782	Rhinopithecus_bieti
ENSAMEG00000012006	-	99	61.757	ENSRROG00000031644	ZNF791	99	69.277	Rhinopithecus_roxellana
ENSAMEG00000012006	-	99	57.485	ENSRROG00000030540	ZNF700	99	57.485	Rhinopithecus_roxellana
ENSAMEG00000012006	-	99	64.072	ENSSBOG00000024486	ZNF791	99	67.203	Saimiri_boliviensis_boliviensis
ENSAMEG00000012006	-	99	57.995	ENSSSCG00000036608	-	99	56.461	Sus_scrofa
ENSAMEG00000012006	-	99	62.851	ENSSSCG00000022634	-	94	62.851	Sus_scrofa
ENSAMEG00000012006	-	98	60.777	ENSSSCG00000039774	-	99	60.777	Sus_scrofa
ENSAMEG00000012006	-	100	90.987	ENSSSCG00000029347	-	100	90.987	Sus_scrofa
ENSAMEG00000012006	-	91	64.833	ENSTTRG00000003482	-	100	64.096	Tursiops_truncatus
ENSAMEG00000012006	-	99	59.557	ENSTTRG00000000768	-	99	61.462	Tursiops_truncatus
ENSAMEG00000012006	-	86	67.857	ENSUAMG00000017817	-	99	64.539	Ursus_americanus
ENSAMEG00000012006	-	91	93.187	ENSUAMG00000019652	-	96	93.187	Ursus_americanus
ENSAMEG00000012006	-	86	67.857	ENSUMAG00000019496	-	99	64.539	Ursus_maritimus
ENSAMEG00000012006	-	87	99.074	ENSUMAG00000007577	-	99	99.074	Ursus_maritimus
ENSAMEG00000012006	-	97	66.471	ENSVPAG00000009652	-	100	65.795	Vicugna_pacos
ENSAMEG00000012006	-	83	60.514	ENSVVUG00000023811	-	99	61.823	Vulpes_vulpes
ENSAMEG00000012006	-	87	97.917	ENSVVUG00000023819	-	99	97.917	Vulpes_vulpes