EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000012146 (Gene tree)
Gene ID: 100466197
Gene Symbol: SAFB2
Alias: KIAA0138
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 31565 bases
Position: chrGL193677.1:362840-394404
Accession: 21605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000012854	RRM_1	PF00076.22	6.3e-13	1	1
ENSAMEP00000012889	RRM_1	PF00076.22	6.4e-13	1	1
ENSAMEP00000012854	SAP	PF02037.27	1e-10	1	1
ENSAMEP00000012889	SAP	PF02037.27	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000013397	SAFB2-201	2811	-	ENSAMEP00000012854	936 (aa)	-	G1M0J4
ENSAMET00000013432	SAFB2-202	2844	-	ENSAMEP00000012889	948 (aa)	-	G1M0M9

Gene Model

Click here to download ENSAMEG00000012146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000012146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000012146	SAFB2	68	73.155	ENSAMEG00000012254	SAFB	100	67.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000012146	SAFB2	100	86.149	ENSG00000130254	SAFB2	100	86.254	Homo_sapiens
ENSAMEG00000012146	SAFB2	100	86.359	ENSANAG00000031936	SAFB2	100	86.359	Aotus_nancymaae
ENSAMEG00000012146	SAFB2	100	82.780	ENSBTAG00000001790	SAFB2	100	86.268	Bos_taurus
ENSAMEG00000012146	SAFB2	100	94.561	ENSCAFG00000018814	SAFB2	100	94.561	Canis_familiaris
ENSAMEG00000012146	SAFB2	100	94.357	ENSCAFG00020018939	SAFB2	100	94.357	Canis_lupus_dingo
ENSAMEG00000012146	SAFB2	100	82.158	ENSCHIG00000024547	SAFB2	100	85.639	Capra_hircus
ENSAMEG00000012146	SAFB2	93	66.081	ENSCAPG00000011771	SAFB2	100	68.784	Cavia_aperea
ENSAMEG00000012146	SAFB2	100	77.902	ENSCPOG00000011394	SAFB2	100	78.106	Cavia_porcellus
ENSAMEG00000012146	SAFB2	100	86.015	ENSCCAG00000017348	SAFB2	100	86.015	Cebus_capucinus
ENSAMEG00000012146	SAFB2	100	85.504	ENSCATG00000039497	SAFB2	100	85.609	Cercocebus_atys
ENSAMEG00000012146	SAFB2	100	86.254	ENSCSAG00000009959	SAFB2	100	86.359	Chlorocebus_sabaeus
ENSAMEG00000012146	SAFB2	74	74.753	ENSCHOG00000010684	SAFB2	100	74.894	Choloepus_hoffmanni
ENSAMEG00000012146	SAFB2	100	83.001	ENSCANG00000024675	SAFB2	100	83.159	Colobus_angolensis_palliatus
ENSAMEG00000012146	SAFB2	100	68.214	ENSCGRG00001015833	Safb2	100	67.104	Cricetulus_griseus_chok1gshd
ENSAMEG00000012146	SAFB2	100	68.214	ENSCGRG00000011131	Safb2	100	67.104	Cricetulus_griseus_crigri
ENSAMEG00000012146	SAFB2	95	74.484	ENSDORG00000016199	Safb2	100	74.593	Dipodomys_ordii
ENSAMEG00000012146	SAFB2	87	84.242	ENSEASG00005022952	SAFB2	91	84.048	Equus_asinus_asinus
ENSAMEG00000012146	SAFB2	98	84.930	ENSECAG00000018978	SAFB2	100	84.454	Equus_caballus
ENSAMEG00000012146	SAFB2	100	91.736	ENSFCAG00000011834	SAFB2	100	91.736	Felis_catus
ENSAMEG00000012146	SAFB2	91	80.727	ENSFDAG00000020009	SAFB2	91	80.968	Fukomys_damarensis
ENSAMEG00000012146	SAFB2	99	82.434	ENSGGOG00000015093	SAFB2	100	81.439	Gorilla_gorilla
ENSAMEG00000012146	SAFB2	100	83.333	ENSHGLG00000017442	SAFB2	100	83.436	Heterocephalus_glaber_female
ENSAMEG00000012146	SAFB2	99	81.983	ENSLAFG00000003836	SAFB2	99	81.964	Loxodonta_africana
ENSAMEG00000012146	SAFB2	100	86.359	ENSMFAG00000039706	SAFB2	100	86.464	Macaca_fascicularis
ENSAMEG00000012146	SAFB2	100	86.674	ENSMMUG00000017968	SAFB2	100	86.779	Macaca_mulatta
ENSAMEG00000012146	SAFB2	100	80.564	ENSMNEG00000032042	SAFB2	100	80.669	Macaca_nemestrina
ENSAMEG00000012146	SAFB2	100	86.569	ENSMLEG00000034562	SAFB2	100	86.674	Mandrillus_leucophaeus
ENSAMEG00000012146	SAFB2	81	71.804	ENSMAUG00000011573	Safb2	92	71.942	Mesocricetus_auratus
ENSAMEG00000012146	SAFB2	100	85.177	ENSMICG00000008711	SAFB2	100	85.177	Microcebus_murinus
ENSAMEG00000012146	SAFB2	100	68.623	ENSMOCG00000006827	Safb2	100	67.510	Microtus_ochrogaster
ENSAMEG00000012146	SAFB2	98	71.323	ENSMODG00000001178	SAFB2	100	70.613	Monodelphis_domestica
ENSAMEG00000012146	SAFB2	100	68.531	MGP_CAROLIEiJ_G0021779	Safb2	100	67.333	Mus_caroli
ENSAMEG00000012146	SAFB2	100	68.800	ENSMUSG00000042625	Safb2	100	67.600	Mus_musculus
ENSAMEG00000012146	SAFB2	100	68.241	MGP_PahariEiJ_G0020768	Safb2	100	67.035	Mus_pahari
ENSAMEG00000012146	SAFB2	100	61.963	MGP_SPRETEiJ_G0022690	Safb2	100	63.934	Mus_spretus
ENSAMEG00000012146	SAFB2	100	92.880	ENSMPUG00000006106	SAFB2	93	92.880	Mustela_putorius_furo
ENSAMEG00000012146	SAFB2	100	85.983	ENSMLUG00000001050	SAFB2	100	86.254	Myotis_lucifugus
ENSAMEG00000012146	SAFB2	100	86.149	ENSNLEG00000013514	SAFB2	100	86.254	Nomascus_leucogenys
ENSAMEG00000012146	SAFB2	94	67.303	ENSMEUG00000002456	SAFB2	100	66.854	Notamacropus_eugenii
ENSAMEG00000012146	SAFB2	100	72.037	ENSOPRG00000011523	-	100	72.245	Ochotona_princeps
ENSAMEG00000012146	SAFB2	100	80.478	ENSODEG00000014751	SAFB2	100	80.478	Octodon_degus
ENSAMEG00000012146	SAFB2	100	84.342	ENSOGAG00000006855	SAFB2	100	84.238	Otolemur_garnettii
ENSAMEG00000012146	SAFB2	98	77.419	ENSOARG00000007982	SAFB2	67	89.739	Ovis_aries
ENSAMEG00000012146	SAFB2	100	86.674	ENSPPAG00000043392	SAFB2	100	86.779	Pan_paniscus
ENSAMEG00000012146	SAFB2	100	91.527	ENSPPRG00000011310	SAFB2	100	91.527	Panthera_pardus
ENSAMEG00000012146	SAFB2	100	80.483	ENSPTRG00000010334	SAFB2	100	80.483	Pan_troglodytes
ENSAMEG00000012146	SAFB2	100	86.464	ENSPANG00000007004	SAFB2	100	86.569	Papio_anubis
ENSAMEG00000012146	SAFB2	100	66.366	ENSPEMG00000016015	Safb2	100	65.265	Peromyscus_maniculatus_bairdii
ENSAMEG00000012146	SAFB2	64	73.934	ENSPCIG00000009518	-	99	76.427	Phascolarctos_cinereus
ENSAMEG00000012146	SAFB2	100	86.464	ENSPPYG00000009427	SAFB2	100	86.464	Pongo_abelii
ENSAMEG00000012146	SAFB2	100	78.892	ENSPCAG00000006352	SAFB2	100	79.624	Procavia_capensis
ENSAMEG00000012146	SAFB2	100	83.508	ENSPCOG00000023260	SAFB2	100	82.577	Propithecus_coquereli
ENSAMEG00000012146	SAFB2	59	91.304	ENSPVAG00000004902	-	70	91.304	Pteropus_vampyrus
ENSAMEG00000012146	SAFB2	82	67.482	ENSRNOG00000049511	AABR07066522.1	99	68.159	Rattus_norvegicus
ENSAMEG00000012146	SAFB2	81	90.368	ENSRBIG00000033446	SAFB2	99	90.543	Rhinopithecus_bieti
ENSAMEG00000012146	SAFB2	100	86.674	ENSRROG00000006606	SAFB2	100	86.779	Rhinopithecus_roxellana
ENSAMEG00000012146	SAFB2	100	85.414	ENSSBOG00000032315	SAFB2	100	85.414	Saimiri_boliviensis_boliviensis
ENSAMEG00000012146	SAFB2	97	71.243	ENSSHAG00000012703	SAFB2	100	69.675	Sarcophilus_harrisii
ENSAMEG00000012146	SAFB2	81	71.705	ENSSARG00000000649	SAFB2	100	71.907	Sorex_araneus
ENSAMEG00000012146	SAFB2	100	90.596	ENSSSCG00000013523	SAFB2	100	90.596	Sus_scrofa
ENSAMEG00000012146	SAFB2	77	77.358	ENSTBEG00000012709	SAFB2	85	77.083	Tupaia_belangeri
ENSAMEG00000012146	SAFB2	94	82.623	ENSTTRG00000013585	SAFB2	93	82.063	Tursiops_truncatus
ENSAMEG00000012146	SAFB2	99	95.903	ENSUAMG00000024695	SAFB2	99	95.903	Ursus_americanus
ENSAMEG00000012146	SAFB2	86	97.015	ENSUMAG00000009585	SAFB2	91	97.015	Ursus_maritimus
ENSAMEG00000012146	SAFB2	74	87.629	ENSVPAG00000012041	SAFB2	88	87.634	Vicugna_pacos
ENSAMEG00000012146	SAFB2	100	94.462	ENSVVUG00000013695	SAFB2	100	94.462	Vulpes_vulpes