EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000012254 (Gene tree)
Gene ID: 100466441
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 35224 bases
Position: chrGL193677.1:394887-430110
Accession: 100466441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000012958	RRM_5	PF13893.6	6.6e-07	1	1
ENSAMEP00000012958	RRM_1	PF00076.22	2.3e-13	1	1
ENSAMEP00000012958	SAP	PF02037.27	6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000013502	SAFB-201	2727	XM_011235422	ENSAMEP00000012958	908 (aa)	XP_011233724	G1M0U8

Gene Model

Click here to download ENSAMEG00000012254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000012254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000012254	SAFB	100	67.804	ENSAMEG00000012146	SAFB2	68	73.155

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000012254	SAFB	98	92.076	ENSG00000160633	SAFB	100	92.174	Homo_sapiens
ENSAMEG00000012254	SAFB	90	44.226	ENSAPOG00000022508	safb	66	43.506	Acanthochromis_polyacanthus
ENSAMEG00000012254	SAFB	98	38.950	ENSACIG00000006247	safb	73	42.265	Amphilophus_citrinellus
ENSAMEG00000012254	SAFB	93	43.367	ENSAOCG00000006308	safb	71	43.556	Amphiprion_ocellaris
ENSAMEG00000012254	SAFB	90	43.972	ENSAPEG00000023342	safb	66	43.112	Amphiprion_percula
ENSAMEG00000012254	SAFB	96	41.802	ENSATEG00000004998	safb	66	42.717	Anabas_testudineus
ENSAMEG00000012254	SAFB	94	64.747	ENSAPLG00000005780	-	67	61.313	Anas_platyrhynchos
ENSAMEG00000012254	SAFB	60	62.956	ENSAPLG00000006355	-	69	60.720	Anas_platyrhynchos
ENSAMEG00000012254	SAFB	98	91.964	ENSANAG00000028821	SAFB	100	92.065	Aotus_nancymaae
ENSAMEG00000012254	SAFB	90	42.204	ENSACLG00000001926	safb	65	42.484	Astatotilapia_calliptera
ENSAMEG00000012254	SAFB	91	44.759	ENSAMXG00000018154	safb	66	42.695	Astyanax_mexicanus
ENSAMEG00000012254	SAFB	98	90.737	ENSBTAG00000007875	SAFB	100	89.891	Bos_taurus
ENSAMEG00000012254	SAFB	81	95.745	ENSCJAG00000017081	SAFB	100	93.889	Callithrix_jacchus
ENSAMEG00000012254	SAFB	100	97.500	ENSCAFG00000018803	SAFB	87	97.500	Canis_familiaris
ENSAMEG00000012254	SAFB	100	97.500	ENSCAFG00020018943	SAFB	100	97.500	Canis_lupus_dingo
ENSAMEG00000012254	SAFB	98	89.397	ENSCHIG00000007262	SAFB	100	88.587	Capra_hircus
ENSAMEG00000012254	SAFB	59	79.065	ENSTSYG00000001851	-	50	92.885	Carlito_syrichta
ENSAMEG00000012254	SAFB	100	86.017	ENSCPOG00000026322	SAFB	100	86.653	Cavia_porcellus
ENSAMEG00000012254	SAFB	98	92.085	ENSCCAG00000020193	SAFB	100	92.182	Cebus_capucinus
ENSAMEG00000012254	SAFB	98	92.411	ENSCATG00000029994	SAFB	100	92.500	Cercocebus_atys
ENSAMEG00000012254	SAFB	100	86.581	ENSCLAG00000007734	SAFB	100	88.179	Chinchilla_lanigera
ENSAMEG00000012254	SAFB	98	92.411	ENSCSAG00000009949	SAFB	100	92.500	Chlorocebus_sabaeus
ENSAMEG00000012254	SAFB	87	92.857	ENSCHOG00000003208	SAFB	93	92.857	Choloepus_hoffmanni
ENSAMEG00000012254	SAFB	92	64.692	ENSCPBG00000010928	-	65	60.721	Chrysemys_picta_bellii
ENSAMEG00000012254	SAFB	94	95.025	ENSCANG00000004774	-	100	95.025	Colobus_angolensis_palliatus
ENSAMEG00000012254	SAFB	98	86.049	ENSCANG00000019754	-	70	85.423	Colobus_angolensis_palliatus
ENSAMEG00000012254	SAFB	98	82.770	ENSCGRG00001002254	Safb	100	82.997	Cricetulus_griseus_chok1gshd
ENSAMEG00000012254	SAFB	91	80.571	ENSCGRG00000011529	Safb	96	81.029	Cricetulus_griseus_crigri
ENSAMEG00000012254	SAFB	97	41.223	ENSCSEG00000019870	safb	69	40.260	Cynoglossus_semilaevis
ENSAMEG00000012254	SAFB	91	41.810	ENSDARG00000020467	safb	63	58.268	Danio_rerio
ENSAMEG00000012254	SAFB	98	91.527	ENSDNOG00000015746	SAFB	95	92.401	Dasypus_novemcinctus
ENSAMEG00000012254	SAFB	100	81.144	ENSDORG00000016200	Safb	100	82.135	Dipodomys_ordii
ENSAMEG00000012254	SAFB	74	84.286	ENSETEG00000018679	SAFB	74	86.498	Echinops_telfairi
ENSAMEG00000012254	SAFB	98	89.456	ENSEASG00005023019	SAFB	100	90.270	Equus_asinus_asinus
ENSAMEG00000012254	SAFB	98	91.518	ENSECAG00000018659	SAFB	89	91.739	Equus_caballus
ENSAMEG00000012254	SAFB	98	41.658	ENSELUG00000022327	safb	78	51.899	Esox_lucius
ENSAMEG00000012254	SAFB	100	97.283	ENSFCAG00000011835	SAFB	100	97.283	Felis_catus
ENSAMEG00000012254	SAFB	58	59.750	ENSFALG00000013881	-	68	59.160	Ficedula_albicollis
ENSAMEG00000012254	SAFB	100	64.795	ENSFALG00000013882	-	63	62.794	Ficedula_albicollis
ENSAMEG00000012254	SAFB	95	81.392	ENSFDAG00000020306	SAFB	100	85.933	Fukomys_damarensis
ENSAMEG00000012254	SAFB	60	46.726	ENSGMOG00000014280	safb	65	39.935	Gadus_morhua
ENSAMEG00000012254	SAFB	100	64.757	ENSGALG00000013365	-	69	62.579	Gallus_gallus
ENSAMEG00000012254	SAFB	98	42.066	ENSGACG00000011385	safb	67	42.419	Gasterosteus_aculeatus
ENSAMEG00000012254	SAFB	73	59.733	ENSGAGG00000017702	-	55	53.125	Gopherus_agassizii
ENSAMEG00000012254	SAFB	98	91.853	ENSGGOG00000015109	SAFB	100	91.957	Gorilla_gorilla
ENSAMEG00000012254	SAFB	98	38.521	ENSHBUG00000009218	safb	71	40.610	Haplochromis_burtoni
ENSAMEG00000012254	SAFB	100	88.889	ENSHGLG00000015883	SAFB	100	89.744	Heterocephalus_glaber_female
ENSAMEG00000012254	SAFB	92	37.225	ENSHCOG00000001705	safb	67	37.435	Hippocampus_comes
ENSAMEG00000012254	SAFB	94	90.482	ENSSTOG00000002783	SAFB	100	91.399	Ictidomys_tridecemlineatus
ENSAMEG00000012254	SAFB	100	84.681	ENSJJAG00000009021	Safb	100	84.894	Jaculus_jaculus
ENSAMEG00000012254	SAFB	98	41.251	ENSLBEG00000006015	safb	65	44.246	Labrus_bergylta
ENSAMEG00000012254	SAFB	64	52.649	ENSLACG00000018090	SAFB	68	51.398	Latimeria_chalumnae
ENSAMEG00000012254	SAFB	96	47.065	ENSLOCG00000003613	safb	76	45.852	Lepisosteus_oculatus
ENSAMEG00000012254	SAFB	99	89.359	ENSLAFG00000003840	SAFB	100	85.870	Loxodonta_africana
ENSAMEG00000012254	SAFB	98	92.308	ENSMFAG00000003885	SAFB	100	92.400	Macaca_fascicularis
ENSAMEG00000012254	SAFB	98	92.411	ENSMMUG00000017970	SAFB	100	92.500	Macaca_mulatta
ENSAMEG00000012254	SAFB	98	88.740	ENSMNEG00000035637	SAFB	100	88.925	Macaca_nemestrina
ENSAMEG00000012254	SAFB	98	86.333	ENSMLEG00000038637	SAFB	100	86.580	Mandrillus_leucophaeus
ENSAMEG00000012254	SAFB	97	40.847	ENSMAMG00000003357	safb	61	41.417	Mastacembelus_armatus
ENSAMEG00000012254	SAFB	96	41.323	ENSMZEG00005009120	safb	67	42.743	Maylandia_zebra
ENSAMEG00000012254	SAFB	89	56.951	ENSMGAG00000001051	-	78	54.784	Meleagris_gallopavo
ENSAMEG00000012254	SAFB	98	63.240	ENSMGAG00000001101	-	68	59.241	Meleagris_gallopavo
ENSAMEG00000012254	SAFB	53	89.733	ENSMAUG00000005013	Safb	100	90.554	Mesocricetus_auratus
ENSAMEG00000012254	SAFB	100	88.165	ENSMICG00000008739	-	100	89.034	Microcebus_murinus
ENSAMEG00000012254	SAFB	85	78.033	ENSMICG00000046795	-	98	85.106	Microcebus_murinus
ENSAMEG00000012254	SAFB	98	83.969	ENSMOCG00000014040	Safb	100	83.741	Microtus_ochrogaster
ENSAMEG00000012254	SAFB	100	73.617	ENSMODG00000001236	SAFB	100	74.043	Monodelphis_domestica
ENSAMEG00000012254	SAFB	94	40.798	ENSMALG00000020330	safb	70	41.262	Monopterus_albus
ENSAMEG00000012254	SAFB	100	82.484	MGP_CAROLIEiJ_G0021780	Safb	100	83.546	Mus_caroli
ENSAMEG00000012254	SAFB	100	82.590	ENSMUSG00000071054	Safb	100	83.652	Mus_musculus
ENSAMEG00000012254	SAFB	98	82.916	MGP_PahariEiJ_G0020769	Safb	100	83.351	Mus_pahari
ENSAMEG00000012254	SAFB	100	96.739	ENSMPUG00000006123	SAFB	94	96.739	Mustela_putorius_furo
ENSAMEG00000012254	SAFB	98	94.085	ENSMLUG00000001081	SAFB	100	92.717	Myotis_lucifugus
ENSAMEG00000012254	SAFB	100	80.403	ENSNGAG00000019882	Safb	100	80.508	Nannospalax_galili
ENSAMEG00000012254	SAFB	94	92.308	ENSNLEG00000013551	SAFB	100	92.404	Nomascus_leucogenys
ENSAMEG00000012254	SAFB	89	82.864	ENSOPRG00000011561	-	100	85.312	Ochotona_princeps
ENSAMEG00000012254	SAFB	100	89.031	ENSODEG00000014838	SAFB	100	89.883	Octodon_degus
ENSAMEG00000012254	SAFB	96	41.112	ENSONIG00000002318	safb	67	42.857	Oreochromis_niloticus
ENSAMEG00000012254	SAFB	91	81.032	ENSOCUG00000014628	SAFB	65	84.758	Oryctolagus_cuniculus
ENSAMEG00000012254	SAFB	90	42.940	ENSORLG00000016989	safb	66	40.777	Oryzias_latipes
ENSAMEG00000012254	SAFB	95	40.805	ENSORLG00020000404	safb	68	39.209	Oryzias_latipes_hni
ENSAMEG00000012254	SAFB	95	42.444	ENSORLG00015010733	safb	67	40.939	Oryzias_latipes_hsok
ENSAMEG00000012254	SAFB	79	84.379	ENSOARG00000007856	-	82	88.348	Ovis_aries
ENSAMEG00000012254	SAFB	98	86.719	ENSOARG00000007662	-	71	90.738	Ovis_aries
ENSAMEG00000012254	SAFB	98	91.862	ENSPPAG00000035129	SAFB	100	91.965	Pan_paniscus
ENSAMEG00000012254	SAFB	100	97.283	ENSPPRG00000017197	SAFB	100	97.283	Panthera_pardus
ENSAMEG00000012254	SAFB	98	91.862	ENSPTRG00000010335	SAFB	100	91.965	Pan_troglodytes
ENSAMEG00000012254	SAFB	98	92.196	ENSPANG00000007770	SAFB	100	92.291	Papio_anubis
ENSAMEG00000012254	SAFB	94	42.467	ENSPKIG00000009902	safb	87	42.241	Paramormyrops_kingsleyae
ENSAMEG00000012254	SAFB	99	60.824	ENSPSIG00000009367	-	67	59.113	Pelodiscus_sinensis
ENSAMEG00000012254	SAFB	100	62.091	ENSPSIG00000011679	-	70	59.181	Pelodiscus_sinensis
ENSAMEG00000012254	SAFB	98	83.716	ENSPEMG00000020428	Safb	100	83.919	Peromyscus_maniculatus_bairdii
ENSAMEG00000012254	SAFB	59	79.520	ENSPCIG00000009504	-	100	78.782	Phascolarctos_cinereus
ENSAMEG00000012254	SAFB	95	38.958	ENSPFOG00000007745	safb	74	40.484	Poecilia_formosa
ENSAMEG00000012254	SAFB	97	38.798	ENSPLAG00000001614	safb	68	39.452	Poecilia_latipinna
ENSAMEG00000012254	SAFB	95	38.958	ENSPMEG00000021023	safb	70	39.737	Poecilia_mexicana
ENSAMEG00000012254	SAFB	98	92.076	ENSPPYG00000009428	SAFB	100	92.174	Pongo_abelii
ENSAMEG00000012254	SAFB	100	84.324	ENSPCAG00000006475	SAFB	100	85.730	Procavia_capensis
ENSAMEG00000012254	SAFB	100	84.632	ENSPCOG00000014090	SAFB	100	82.717	Propithecus_coquereli
ENSAMEG00000012254	SAFB	98	86.176	ENSPVAG00000004913	SAFB	100	85.668	Pteropus_vampyrus
ENSAMEG00000012254	SAFB	100	82.011	ENSRNOG00000050543	Safb	100	83.492	Rattus_norvegicus
ENSAMEG00000012254	SAFB	98	78.818	ENSRBIG00000042509	SAFB	100	78.765	Rhinopithecus_bieti
ENSAMEG00000012254	SAFB	98	92.308	ENSRROG00000029278	SAFB	100	92.400	Rhinopithecus_roxellana
ENSAMEG00000012254	SAFB	98	92.188	ENSSBOG00000026291	SAFB	100	92.283	Saimiri_boliviensis_boliviensis
ENSAMEG00000012254	SAFB	96	43.991	ENSSFOG00015008156	safb	67	45.814	Scleropages_formosus
ENSAMEG00000012254	SAFB	98	40.598	ENSSMAG00000009316	safb	66	43.018	Scophthalmus_maximus
ENSAMEG00000012254	SAFB	98	42.225	ENSSDUG00000009652	safb	72	41.467	Seriola_dumerili
ENSAMEG00000012254	SAFB	98	42.796	ENSSLDG00000001670	safb	66	42.240	Seriola_lalandi_dorsalis
ENSAMEG00000012254	SAFB	94	86.114	ENSSARG00000010475	SAFB	100	87.515	Sorex_araneus
ENSAMEG00000012254	SAFB	58	57.845	ENSSPUG00000009747	-	70	56.452	Sphenodon_punctatus
ENSAMEG00000012254	SAFB	94	40.868	ENSSPAG00000015682	safb	97	37.832	Stegastes_partitus
ENSAMEG00000012254	SAFB	100	94.092	ENSSSCG00000013522	SAFB	99	94.872	Sus_scrofa
ENSAMEG00000012254	SAFB	66	63.036	ENSTGUG00000000489	-	73	61.215	Taeniopygia_guttata
ENSAMEG00000012254	SAFB	96	64.238	ENSTGUG00000000502	-	72	61.599	Taeniopygia_guttata
ENSAMEG00000012254	SAFB	90	40.883	ENSTRUG00000003567	safb	66	40.610	Takifugu_rubripes
ENSAMEG00000012254	SAFB	89	43.602	ENSTNIG00000015470	safb	76	41.232	Tetraodon_nigroviridis
ENSAMEG00000012254	SAFB	74	81.818	ENSTBEG00000013124	-	66	91.667	Tupaia_belangeri
ENSAMEG00000012254	SAFB	91	100.000	ENSTTRG00000013588	SAFB	92	93.011	Tursiops_truncatus
ENSAMEG00000012254	SAFB	79	96.823	ENSUAMG00000024543	SAFB	94	96.027	Ursus_americanus
ENSAMEG00000012254	SAFB	87	97.445	ENSUMAG00000009734	SAFB	97	96.129	Ursus_maritimus
ENSAMEG00000012254	SAFB	74	97.692	ENSVPAG00000012043	SAFB	79	97.692	Vicugna_pacos
ENSAMEG00000012254	SAFB	100	97.500	ENSVVUG00000013720	SAFB	87	97.500	Vulpes_vulpes
ENSAMEG00000012254	SAFB	66	50.577	ENSXETG00000008755	safb	73	64.356	Xenopus_tropicalis
ENSAMEG00000012254	SAFB	81	45.399	ENSXMAG00000003458	safb	53	51.071	Xiphophorus_maculatus