EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000012581 (Gene tree)
Gene ID: 100468930
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 83996 bases
Position: chrGL193000.1:258857-342852
Accession: 100468930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000013291	XRN_N	PF03159.18	8.1e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000013848	XRN2-201	2853	-	ENSAMEP00000013291	950 (aa)	XP_002923152	G1M1T0

Gene Model

Click here to download ENSAMEG00000012581's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03008	Ribosome biogenesis in eukaryotes	KEGG
aml03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000012581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000012581	XRN2	100	97.895	ENSG00000088930	XRN2	100	97.895	Homo_sapiens
ENSAMEG00000012581	XRN2	97	71.702	ENSAPOG00000009818	xrn2	100	70.438	Acanthochromis_polyacanthus
ENSAMEG00000012581	XRN2	90	70.387	ENSACIG00000015047	xrn2	95	74.664	Amphilophus_citrinellus
ENSAMEG00000012581	XRN2	97	72.115	ENSAOCG00000023632	xrn2	100	70.863	Amphiprion_ocellaris
ENSAMEG00000012581	XRN2	97	71.945	ENSAPEG00000014871	xrn2	100	70.672	Amphiprion_percula
ENSAMEG00000012581	XRN2	95	71.614	ENSATEG00000001273	xrn2	97	70.930	Anabas_testudineus
ENSAMEG00000012581	XRN2	97	83.315	ENSAPLG00000013869	XRN2	99	83.746	Anas_platyrhynchos
ENSAMEG00000012581	XRN2	100	80.952	ENSACAG00000005565	XRN2	100	80.952	Anolis_carolinensis
ENSAMEG00000012581	XRN2	100	97.579	ENSANAG00000020126	XRN2	100	97.579	Aotus_nancymaae
ENSAMEG00000012581	XRN2	90	73.757	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSAMEG00000012581	XRN2	100	71.122	ENSAMXG00000018301	xrn2	100	71.122	Astyanax_mexicanus
ENSAMEG00000012581	XRN2	100	96.425	ENSBTAG00000011304	XRN2	100	96.425	Bos_taurus
ENSAMEG00000012581	XRN2	87	56.163	WBGene00006964	xrn-2	89	55.430	Caenorhabditis_elegans
ENSAMEG00000012581	XRN2	100	97.684	ENSCJAG00000005611	XRN2	100	97.684	Callithrix_jacchus
ENSAMEG00000012581	XRN2	100	99.263	ENSCAFG00000005185	XRN2	100	99.263	Canis_familiaris
ENSAMEG00000012581	XRN2	100	99.263	ENSCAFG00020027479	XRN2	100	99.263	Canis_lupus_dingo
ENSAMEG00000012581	XRN2	100	96.635	ENSCHIG00000006921	XRN2	100	96.635	Capra_hircus
ENSAMEG00000012581	XRN2	100	97.158	ENSTSYG00000008315	XRN2	100	97.158	Carlito_syrichta
ENSAMEG00000012581	XRN2	97	82.309	ENSCAPG00000010773	XRN2	99	82.201	Cavia_aperea
ENSAMEG00000012581	XRN2	100	97.474	ENSCPOG00000009407	XRN2	100	97.474	Cavia_porcellus
ENSAMEG00000012581	XRN2	100	98.211	ENSCATG00000040350	XRN2	100	98.211	Cercocebus_atys
ENSAMEG00000012581	XRN2	100	97.895	ENSCLAG00000013419	XRN2	100	97.895	Chinchilla_lanigera
ENSAMEG00000012581	XRN2	100	98.211	ENSCSAG00000011094	XRN2	100	98.211	Chlorocebus_sabaeus
ENSAMEG00000012581	XRN2	68	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSAMEG00000012581	XRN2	100	84.792	ENSCPBG00000023533	XRN2	100	85.417	Chrysemys_picta_bellii
ENSAMEG00000012581	XRN2	86	60.501	ENSCING00000022336	-	100	60.859	Ciona_intestinalis
ENSAMEG00000012581	XRN2	87	59.308	ENSCSAVG00000011217	-	100	61.787	Ciona_savignyi
ENSAMEG00000012581	XRN2	100	98.211	ENSCANG00000040240	XRN2	100	98.211	Colobus_angolensis_palliatus
ENSAMEG00000012581	XRN2	98	96.340	ENSCGRG00001010676	Xrn2	99	96.340	Cricetulus_griseus_chok1gshd
ENSAMEG00000012581	XRN2	97	95.577	ENSCGRG00000006378	Xrn2	99	95.577	Cricetulus_griseus_crigri
ENSAMEG00000012581	XRN2	54	72.353	ENSCSEG00000005628	xrn2	100	72.353	Cynoglossus_semilaevis
ENSAMEG00000012581	XRN2	89	71.527	ENSCVAG00000018999	xrn2	98	76.952	Cyprinodon_variegatus
ENSAMEG00000012581	XRN2	100	69.918	ENSDARG00000101900	xrn2	96	78.203	Danio_rerio
ENSAMEG00000012581	XRN2	100	97.263	ENSDNOG00000001895	XRN2	100	97.263	Dasypus_novemcinctus
ENSAMEG00000012581	XRN2	100	95.053	ENSDORG00000005434	Xrn2	100	95.053	Dipodomys_ordii
ENSAMEG00000012581	XRN2	87	56.469	FBgn0031868	Rat1	89	55.948	Drosophila_melanogaster
ENSAMEG00000012581	XRN2	100	83.895	ENSETEG00000001740	XRN2	100	83.895	Echinops_telfairi
ENSAMEG00000012581	XRN2	84	71.394	ENSEBUG00000016136	xrn2	100	71.394	Eptatretus_burgeri
ENSAMEG00000012581	XRN2	100	98.000	ENSEASG00005002484	XRN2	100	98.000	Equus_asinus_asinus
ENSAMEG00000012581	XRN2	99	98.099	ENSECAG00000018988	XRN2	100	96.281	Equus_caballus
ENSAMEG00000012581	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSAMEG00000012581	XRN2	100	70.492	ENSELUG00000000552	xrn2	100	70.902	Esox_lucius
ENSAMEG00000012581	XRN2	100	99.263	ENSFCAG00000007970	XRN2	100	99.263	Felis_catus
ENSAMEG00000012581	XRN2	100	82.914	ENSFALG00000004508	XRN2	100	83.333	Ficedula_albicollis
ENSAMEG00000012581	XRN2	100	97.474	ENSFDAG00000016311	XRN2	100	97.474	Fukomys_damarensis
ENSAMEG00000012581	XRN2	54	69.847	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSAMEG00000012581	XRN2	86	73.026	ENSGMOG00000013436	xrn2	100	73.026	Gadus_morhua
ENSAMEG00000012581	XRN2	100	82.932	ENSGALG00000008372	XRN2	100	82.932	Gallus_gallus
ENSAMEG00000012581	XRN2	89	73.605	ENSGAFG00000014284	xrn2	98	73.605	Gambusia_affinis
ENSAMEG00000012581	XRN2	87	74.760	ENSGACG00000011870	xrn2	100	74.760	Gasterosteus_aculeatus
ENSAMEG00000012581	XRN2	100	84.479	ENSGAGG00000004884	XRN2	100	85.104	Gopherus_agassizii
ENSAMEG00000012581	XRN2	100	98.105	ENSGGOG00000013738	XRN2	100	98.105	Gorilla_gorilla
ENSAMEG00000012581	XRN2	54	74.664	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSAMEG00000012581	XRN2	100	96.526	ENSHGLG00000014831	XRN2	100	96.526	Heterocephalus_glaber_female
ENSAMEG00000012581	XRN2	100	96.526	ENSHGLG00100013130	XRN2	100	96.526	Heterocephalus_glaber_male
ENSAMEG00000012581	XRN2	99	68.283	ENSHCOG00000011994	xrn2	99	69.192	Hippocampus_comes
ENSAMEG00000012581	XRN2	100	69.592	ENSIPUG00000006639	xrn2	100	69.592	Ictalurus_punctatus
ENSAMEG00000012581	XRN2	100	98.211	ENSSTOG00000000589	XRN2	100	98.211	Ictidomys_tridecemlineatus
ENSAMEG00000012581	XRN2	100	96.632	ENSJJAG00000022128	Xrn2	100	96.632	Jaculus_jaculus
ENSAMEG00000012581	XRN2	54	79.688	ENSLBEG00000010041	xrn2	100	79.688	Labrus_bergylta
ENSAMEG00000012581	XRN2	94	77.308	ENSLACG00000008307	XRN2	99	79.877	Latimeria_chalumnae
ENSAMEG00000012581	XRN2	99	72.908	ENSLOCG00000016874	xrn2	100	72.908	Lepisosteus_oculatus
ENSAMEG00000012581	XRN2	100	97.158	ENSLAFG00000014624	XRN2	100	97.158	Loxodonta_africana
ENSAMEG00000012581	XRN2	100	98.211	ENSMFAG00000038122	XRN2	100	98.211	Macaca_fascicularis
ENSAMEG00000012581	XRN2	100	98.211	ENSMMUG00000011405	XRN2	100	98.211	Macaca_mulatta
ENSAMEG00000012581	XRN2	100	98.316	ENSMNEG00000040626	XRN2	100	98.316	Macaca_nemestrina
ENSAMEG00000012581	XRN2	100	98.105	ENSMLEG00000041897	XRN2	100	98.105	Mandrillus_leucophaeus
ENSAMEG00000012581	XRN2	95	72.797	ENSMAMG00000008633	xrn2	98	71.279	Mastacembelus_armatus
ENSAMEG00000012581	XRN2	90	75.723	ENSMZEG00005022362	xrn2	97	75.723	Maylandia_zebra
ENSAMEG00000012581	XRN2	99	81.354	ENSMGAG00000003196	XRN2	99	81.354	Meleagris_gallopavo
ENSAMEG00000012581	XRN2	100	96.526	ENSMAUG00000021842	Xrn2	100	96.526	Mesocricetus_auratus
ENSAMEG00000012581	XRN2	100	97.263	ENSMICG00000008126	XRN2	100	97.263	Microcebus_murinus
ENSAMEG00000012581	XRN2	100	96.105	ENSMOCG00000012588	Xrn2	100	96.105	Microtus_ochrogaster
ENSAMEG00000012581	XRN2	89	73.883	ENSMMOG00000017576	xrn2	96	74.432	Mola_mola
ENSAMEG00000012581	XRN2	100	90.947	ENSMODG00000006163	XRN2	100	90.947	Monodelphis_domestica
ENSAMEG00000012581	XRN2	91	72.360	ENSMALG00000011355	xrn2	99	72.360	Monopterus_albus
ENSAMEG00000012581	XRN2	100	95.478	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.478	Mus_caroli
ENSAMEG00000012581	XRN2	100	95.689	ENSMUSG00000027433	Xrn2	100	95.689	Mus_musculus
ENSAMEG00000012581	XRN2	100	95.478	MGP_PahariEiJ_G0025843	Xrn2	100	95.478	Mus_pahari
ENSAMEG00000012581	XRN2	100	95.689	MGP_SPRETEiJ_G0025318	Xrn2	100	95.689	Mus_spretus
ENSAMEG00000012581	XRN2	100	97.622	ENSMPUG00000001198	XRN2	93	97.622	Mustela_putorius_furo
ENSAMEG00000012581	XRN2	100	97.474	ENSMLUG00000001536	XRN2	100	97.474	Myotis_lucifugus
ENSAMEG00000012581	XRN2	100	96.842	ENSNGAG00000018138	Xrn2	100	96.842	Nannospalax_galili
ENSAMEG00000012581	XRN2	90	75.926	ENSNBRG00000008062	xrn2	97	75.926	Neolamprologus_brichardi
ENSAMEG00000012581	XRN2	100	98.105	ENSNLEG00000009991	XRN2	100	98.105	Nomascus_leucogenys
ENSAMEG00000012581	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSAMEG00000012581	XRN2	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSAMEG00000012581	XRN2	98	88.242	ENSODEG00000000860	-	99	88.673	Octodon_degus
ENSAMEG00000012581	XRN2	100	97.368	ENSODEG00000010745	-	100	97.368	Octodon_degus
ENSAMEG00000012581	XRN2	100	71.753	ENSONIG00000018720	xrn2	100	71.959	Oreochromis_niloticus
ENSAMEG00000012581	XRN2	100	91.176	ENSOANG00000015673	XRN2	100	91.176	Ornithorhynchus_anatinus
ENSAMEG00000012581	XRN2	100	98.211	ENSOCUG00000013468	XRN2	100	98.211	Oryctolagus_cuniculus
ENSAMEG00000012581	XRN2	98	70.405	ENSORLG00000017213	xrn2	97	75.058	Oryzias_latipes
ENSAMEG00000012581	XRN2	98	70.405	ENSORLG00020001824	xrn2	100	70.061	Oryzias_latipes_hni
ENSAMEG00000012581	XRN2	98	70.197	ENSORLG00015019747	xrn2	100	69.857	Oryzias_latipes_hsok
ENSAMEG00000012581	XRN2	90	74.104	ENSOMEG00000019820	xrn2	100	69.239	Oryzias_melastigma
ENSAMEG00000012581	XRN2	100	97.056	ENSOGAG00000001068	XRN2	100	97.056	Otolemur_garnettii
ENSAMEG00000012581	XRN2	97	96.544	ENSOARG00000004443	XRN2	100	96.544	Ovis_aries
ENSAMEG00000012581	XRN2	100	98.105	ENSPPAG00000033549	XRN2	100	98.105	Pan_paniscus
ENSAMEG00000012581	XRN2	100	99.263	ENSPPRG00000008732	XRN2	100	99.263	Panthera_pardus
ENSAMEG00000012581	XRN2	97	99.243	ENSPTIG00000015683	XRN2	97	99.243	Panthera_tigris_altaica
ENSAMEG00000012581	XRN2	100	98.105	ENSPTRG00000013308	XRN2	100	98.105	Pan_troglodytes
ENSAMEG00000012581	XRN2	100	98.211	ENSPANG00000018088	XRN2	100	98.211	Papio_anubis
ENSAMEG00000012581	XRN2	100	70.829	ENSPKIG00000016889	xrn2	100	70.829	Paramormyrops_kingsleyae
ENSAMEG00000012581	XRN2	81	87.370	ENSPSIG00000014666	XRN2	100	87.370	Pelodiscus_sinensis
ENSAMEG00000012581	XRN2	100	95.895	ENSPEMG00000000111	Xrn2	100	95.895	Peromyscus_maniculatus_bairdii
ENSAMEG00000012581	XRN2	100	69.886	ENSPFOG00000004182	xrn2	99	70.290	Poecilia_formosa
ENSAMEG00000012581	XRN2	89	74.186	ENSPLAG00000007351	xrn2	96	74.186	Poecilia_latipinna
ENSAMEG00000012581	XRN2	94	68.226	ENSPMEG00000011798	xrn2	99	69.097	Poecilia_mexicana
ENSAMEG00000012581	XRN2	89	74.070	ENSPREG00000012452	xrn2	99	72.503	Poecilia_reticulata
ENSAMEG00000012581	XRN2	100	97.684	ENSPPYG00000010755	XRN2	100	97.684	Pongo_abelii
ENSAMEG00000012581	XRN2	100	91.282	ENSPCAG00000011191	XRN2	100	91.282	Procavia_capensis
ENSAMEG00000012581	XRN2	100	90.421	ENSPCOG00000016468	XRN2	100	90.421	Propithecus_coquereli
ENSAMEG00000012581	XRN2	93	95.745	ENSPVAG00000004596	XRN2	93	95.745	Pteropus_vampyrus
ENSAMEG00000012581	XRN2	90	73.757	ENSPNYG00000001765	xrn2	97	73.757	Pundamilia_nyererei
ENSAMEG00000012581	XRN2	100	71.093	ENSPNAG00000010956	xrn2	99	71.093	Pygocentrus_nattereri
ENSAMEG00000012581	XRN2	100	96.425	ENSRNOG00000011785	Xrn2	100	96.425	Rattus_norvegicus
ENSAMEG00000012581	XRN2	86	98.411	ENSRBIG00000036193	XRN2	100	98.411	Rhinopithecus_bieti
ENSAMEG00000012581	XRN2	100	98.211	ENSRROG00000044400	XRN2	90	98.211	Rhinopithecus_roxellana
ENSAMEG00000012581	XRN2	77	48.069	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSAMEG00000012581	XRN2	100	97.895	ENSSBOG00000021014	XRN2	100	97.895	Saimiri_boliviensis_boliviensis
ENSAMEG00000012581	XRN2	100	72.033	ENSSFOG00015001091	xrn2	100	72.033	Scleropages_formosus
ENSAMEG00000012581	XRN2	92	73.363	ENSSMAG00000007834	xrn2	100	68.997	Scophthalmus_maximus
ENSAMEG00000012581	XRN2	91	72.059	ENSSDUG00000012802	xrn2	99	72.398	Seriola_dumerili
ENSAMEG00000012581	XRN2	93	73.785	ENSSLDG00000021273	xrn2	100	73.785	Seriola_lalandi_dorsalis
ENSAMEG00000012581	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSAMEG00000012581	XRN2	98	79.850	ENSSPUG00000005485	XRN2	96	79.915	Sphenodon_punctatus
ENSAMEG00000012581	XRN2	100	70.522	ENSSPAG00000016027	xrn2	99	70.522	Stegastes_partitus
ENSAMEG00000012581	XRN2	100	96.421	ENSSSCG00000007109	XRN2	100	96.421	Sus_scrofa
ENSAMEG00000012581	XRN2	100	81.733	ENSTGUG00000007535	XRN2	100	82.150	Taeniopygia_guttata
ENSAMEG00000012581	XRN2	100	67.879	ENSTRUG00000015489	xrn2	100	68.251	Takifugu_rubripes
ENSAMEG00000012581	XRN2	100	71.132	ENSTNIG00000010712	xrn2	100	71.132	Tetraodon_nigroviridis
ENSAMEG00000012581	XRN2	100	97.263	ENSTBEG00000004119	XRN2	100	97.263	Tupaia_belangeri
ENSAMEG00000012581	XRN2	93	98.198	ENSTTRG00000009087	XRN2	93	98.198	Tursiops_truncatus
ENSAMEG00000012581	XRN2	100	99.684	ENSUAMG00000024634	XRN2	100	99.684	Ursus_americanus
ENSAMEG00000012581	XRN2	97	99.459	ENSUMAG00000004012	XRN2	95	99.459	Ursus_maritimus
ENSAMEG00000012581	XRN2	89	90.296	ENSVPAG00000010694	XRN2	91	90.296	Vicugna_pacos
ENSAMEG00000012581	XRN2	100	99.368	ENSVVUG00000012178	XRN2	100	99.368	Vulpes_vulpes
ENSAMEG00000012581	XRN2	100	74.583	ENSXETG00000023501	xrn2	100	75.208	Xenopus_tropicalis
ENSAMEG00000012581	XRN2	100	68.243	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus