EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000012598 (Gene tree)
Gene ID: 100473704
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 6783 bases
Position: chrGL192799.1:445382-452164
Accession: 100473704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000013288	zf-CCCH	PF00642.24	2.9e-06	1	1
ENSAMEP00000013288	TRM	PF02005.16	2.5e-148	1	1
ENSAMEP00000013288	Met_10	PF02475.16	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000013845	TRMT1-201	2016	XM_011227225	ENSAMEP00000013288	671 (aa)	XP_011225527	G1M1S7

Gene Model

Click here to download ENSAMEG00000012598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000012598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000012598	TRMT1	96	88.300	ENSG00000104907	TRMT1	100	93.717	Homo_sapiens
ENSAMEG00000012598	TRMT1	85	58.885	ENSACIG00000018680	trmt1	88	58.885	Amphilophus_citrinellus
ENSAMEG00000012598	TRMT1	86	65.404	ENSAOCG00000006781	trmt1	86	65.404	Amphiprion_ocellaris
ENSAMEG00000012598	TRMT1	86	65.464	ENSAPEG00000007712	trmt1	86	65.464	Amphiprion_percula
ENSAMEG00000012598	TRMT1	87	67.065	ENSATEG00000001872	trmt1	86	67.065	Anabas_testudineus
ENSAMEG00000012598	TRMT1	89	65.677	ENSACAG00000003825	TRMT1	97	65.677	Anolis_carolinensis
ENSAMEG00000012598	TRMT1	97	83.333	ENSANAG00000023016	TRMT1	99	85.761	Aotus_nancymaae
ENSAMEG00000012598	TRMT1	85	64.808	ENSACLG00000010073	trmt1	92	64.808	Astatotilapia_calliptera
ENSAMEG00000012598	TRMT1	88	66.335	ENSAMXG00000012026	trmt1	89	66.335	Astyanax_mexicanus
ENSAMEG00000012598	TRMT1	100	88.376	ENSBTAG00000019325	TRMT1	95	88.376	Bos_taurus
ENSAMEG00000012598	TRMT1	77	40.720	WBGene00006613	trm-1	94	40.720	Caenorhabditis_elegans
ENSAMEG00000012598	TRMT1	96	83.231	ENSCJAG00000004566	TRMT1	99	83.231	Callithrix_jacchus
ENSAMEG00000012598	TRMT1	99	94.144	ENSCAFG00000017070	TRMT1	100	94.976	Canis_familiaris
ENSAMEG00000012598	TRMT1	97	92.956	ENSCAFG00020005397	TRMT1	100	90.181	Canis_lupus_dingo
ENSAMEG00000012598	TRMT1	99	88.235	ENSCHIG00000013569	TRMT1	100	88.235	Capra_hircus
ENSAMEG00000012598	TRMT1	96	82.426	ENSTSYG00000003207	TRMT1	99	82.165	Carlito_syrichta
ENSAMEG00000012598	TRMT1	84	80.000	ENSCAPG00000003355	TRMT1	99	80.000	Cavia_aperea
ENSAMEG00000012598	TRMT1	98	82.648	ENSCPOG00000011754	TRMT1	99	82.648	Cavia_porcellus
ENSAMEG00000012598	TRMT1	97	81.135	ENSCCAG00000022263	TRMT1	99	84.441	Cebus_capucinus
ENSAMEG00000012598	TRMT1	99	87.160	ENSCATG00000039850	TRMT1	100	87.160	Cercocebus_atys
ENSAMEG00000012598	TRMT1	83	73.362	ENSCATG00000038220	-	98	73.362	Cercocebus_atys
ENSAMEG00000012598	TRMT1	98	84.802	ENSCLAG00000015295	TRMT1	97	84.802	Chinchilla_lanigera
ENSAMEG00000012598	TRMT1	79	88.679	ENSCSAG00000006500	TRMT1	100	88.679	Chlorocebus_sabaeus
ENSAMEG00000012598	TRMT1	88	69.477	ENSCPBG00000023866	TRMT1	87	69.631	Chrysemys_picta_bellii
ENSAMEG00000012598	TRMT1	83	45.312	ENSCING00000002884	-	99	45.312	Ciona_intestinalis
ENSAMEG00000012598	TRMT1	82	45.848	ENSCSAVG00000010927	-	100	45.387	Ciona_savignyi
ENSAMEG00000012598	TRMT1	94	67.516	ENSCANG00000031650	-	98	67.551	Colobus_angolensis_palliatus
ENSAMEG00000012598	TRMT1	97	71.210	ENSCANG00000040631	TRMT1	99	71.210	Colobus_angolensis_palliatus
ENSAMEG00000012598	TRMT1	99	81.982	ENSCGRG00001022594	Trmt1	100	82.012	Cricetulus_griseus_chok1gshd
ENSAMEG00000012598	TRMT1	99	81.982	ENSCGRG00000017732	Trmt1	100	81.982	Cricetulus_griseus_crigri
ENSAMEG00000012598	TRMT1	87	65.695	ENSCSEG00000001643	trmt1	84	68.288	Cynoglossus_semilaevis
ENSAMEG00000012598	TRMT1	94	62.090	ENSCVAG00000011886	trmt1	96	62.090	Cyprinodon_variegatus
ENSAMEG00000012598	TRMT1	85	65.577	ENSDARG00000010978	trmt1	85	65.577	Danio_rerio
ENSAMEG00000012598	TRMT1	83	61.607	ENSDNOG00000048240	-	95	61.607	Dasypus_novemcinctus
ENSAMEG00000012598	TRMT1	97	80.428	ENSDORG00000014298	Trmt1	99	80.428	Dipodomys_ordii
ENSAMEG00000012598	TRMT1	77	47.736	FBgn0032430	CG6388	89	47.736	Drosophila_melanogaster
ENSAMEG00000012598	TRMT1	50	82.456	ENSETEG00000015483	-	52	82.456	Echinops_telfairi
ENSAMEG00000012598	TRMT1	90	50.000	ENSEBUG00000003449	trmt1	82	52.415	Eptatretus_burgeri
ENSAMEG00000012598	TRMT1	93	88.141	ENSEASG00005004050	TRMT1	100	87.912	Equus_asinus_asinus
ENSAMEG00000012598	TRMT1	93	88.462	ENSECAG00000016149	TRMT1	100	88.226	Equus_caballus
ENSAMEG00000012598	TRMT1	59	71.285	ENSEEUG00000014102	-	100	71.285	Erinaceus_europaeus
ENSAMEG00000012598	TRMT1	85	64.931	ENSELUG00000021659	trmt1	85	64.931	Esox_lucius
ENSAMEG00000012598	TRMT1	97	92.966	ENSFCAG00000000483	TRMT1	99	92.966	Felis_catus
ENSAMEG00000012598	TRMT1	99	82.628	ENSFDAG00000007386	TRMT1	99	82.628	Fukomys_damarensis
ENSAMEG00000012598	TRMT1	87	64.103	ENSFHEG00000012865	trmt1	90	67.037	Fundulus_heteroclitus
ENSAMEG00000012598	TRMT1	85	60.245	ENSGMOG00000006564	trmt1	98	60.771	Gadus_morhua
ENSAMEG00000012598	TRMT1	86	67.069	ENSGAFG00000011862	trmt1	89	67.470	Gambusia_affinis
ENSAMEG00000012598	TRMT1	89	62.104	ENSGACG00000000227	trmt1	96	62.104	Gasterosteus_aculeatus
ENSAMEG00000012598	TRMT1	90	68.309	ENSGAGG00000016432	TRMT1	88	68.309	Gopherus_agassizii
ENSAMEG00000012598	TRMT1	96	88.456	ENSGGOG00000014007	TRMT1	99	88.073	Gorilla_gorilla
ENSAMEG00000012598	TRMT1	85	57.168	ENSHBUG00000008821	trmt1	94	57.168	Haplochromis_burtoni
ENSAMEG00000012598	TRMT1	98	83.587	ENSHGLG00000015972	TRMT1	99	83.587	Heterocephalus_glaber_female
ENSAMEG00000012598	TRMT1	98	77.238	ENSHGLG00100018112	TRMT1	99	77.238	Heterocephalus_glaber_male
ENSAMEG00000012598	TRMT1	85	63.222	ENSHCOG00000009447	trmt1	88	63.222	Hippocampus_comes
ENSAMEG00000012598	TRMT1	86	65.593	ENSIPUG00000002899	trmt1	85	65.593	Ictalurus_punctatus
ENSAMEG00000012598	TRMT1	99	85.671	ENSSTOG00000012531	TRMT1	100	85.671	Ictidomys_tridecemlineatus
ENSAMEG00000012598	TRMT1	93	82.830	ENSJJAG00000017154	Trmt1	100	80.873	Jaculus_jaculus
ENSAMEG00000012598	TRMT1	88	64.805	ENSKMAG00000011809	trmt1	98	64.805	Kryptolebias_marmoratus
ENSAMEG00000012598	TRMT1	85	67.075	ENSLBEG00000012703	trmt1	84	67.075	Labrus_bergylta
ENSAMEG00000012598	TRMT1	86	57.363	ENSLACG00000014585	TRMT1	99	55.412	Latimeria_chalumnae
ENSAMEG00000012598	TRMT1	85	62.241	ENSLOCG00000006479	trmt1	97	62.759	Lepisosteus_oculatus
ENSAMEG00000012598	TRMT1	97	86.441	ENSLAFG00000014072	TRMT1	100	86.441	Loxodonta_africana
ENSAMEG00000012598	TRMT1	99	87.311	ENSMFAG00000033143	TRMT1	100	87.311	Macaca_fascicularis
ENSAMEG00000012598	TRMT1	97	81.126	ENSMMUG00000001167	TRMT1	99	81.126	Macaca_mulatta
ENSAMEG00000012598	TRMT1	99	87.160	ENSMNEG00000037867	TRMT1	100	87.160	Macaca_nemestrina
ENSAMEG00000012598	TRMT1	97	86.850	ENSMLEG00000016142	TRMT1	99	86.850	Mandrillus_leucophaeus
ENSAMEG00000012598	TRMT1	85	67.133	ENSMAMG00000004357	trmt1	85	67.133	Mastacembelus_armatus
ENSAMEG00000012598	TRMT1	85	64.808	ENSMZEG00005014510	trmt1	85	64.808	Maylandia_zebra
ENSAMEG00000012598	TRMT1	97	82.308	ENSMAUG00000011134	Trmt1	100	81.381	Mesocricetus_auratus
ENSAMEG00000012598	TRMT1	99	87.915	ENSMICG00000000793	TRMT1	100	87.915	Microcebus_murinus
ENSAMEG00000012598	TRMT1	97	81.902	ENSMOCG00000015895	Trmt1	100	81.109	Microtus_ochrogaster
ENSAMEG00000012598	TRMT1	85	66.725	ENSMMOG00000011097	trmt1	92	66.725	Mola_mola
ENSAMEG00000012598	TRMT1	92	75.566	ENSMODG00000011619	TRMT1	99	75.566	Monodelphis_domestica
ENSAMEG00000012598	TRMT1	99	81.532	MGP_CAROLIEiJ_G0031304	Trmt1	100	84.030	Mus_caroli
ENSAMEG00000012598	TRMT1	99	81.532	ENSMUSG00000001909	Trmt1	100	83.270	Mus_musculus
ENSAMEG00000012598	TRMT1	99	81.682	MGP_SPRETEiJ_G0032422	Trmt1	100	83.270	Mus_spretus
ENSAMEG00000012598	TRMT1	100	94.933	ENSMPUG00000004210	TRMT1	96	94.933	Mustela_putorius_furo
ENSAMEG00000012598	TRMT1	100	87.183	ENSMLUG00000012809	TRMT1	100	87.183	Myotis_lucifugus
ENSAMEG00000012598	TRMT1	96	82.582	ENSNGAG00000022486	Trmt1	97	82.582	Nannospalax_galili
ENSAMEG00000012598	TRMT1	74	67.359	ENSNBRG00000024376	trmt1	85	67.359	Neolamprologus_brichardi
ENSAMEG00000012598	TRMT1	77	86.095	ENSNLEG00000013019	-	99	86.095	Nomascus_leucogenys
ENSAMEG00000012598	TRMT1	88	75.211	ENSMEUG00000013756	TRMT1	99	75.211	Notamacropus_eugenii
ENSAMEG00000012598	TRMT1	81	85.393	ENSOPRG00000009471	-	82	85.393	Ochotona_princeps
ENSAMEG00000012598	TRMT1	97	84.202	ENSODEG00000010323	TRMT1	99	84.202	Octodon_degus
ENSAMEG00000012598	TRMT1	92	64.103	ENSONIG00000000400	trmt1	99	64.103	Oreochromis_niloticus
ENSAMEG00000012598	TRMT1	78	88.571	ENSOCUG00000021934	TRMT1	99	88.571	Oryctolagus_cuniculus
ENSAMEG00000012598	TRMT1	87	61.800	ENSORLG00000020074	trmt1	92	61.655	Oryzias_latipes
ENSAMEG00000012598	TRMT1	87	64.605	ENSORLG00020007561	trmt1	91	64.433	Oryzias_latipes_hni
ENSAMEG00000012598	TRMT1	87	65.120	ENSORLG00015006547	trmt1	88	64.948	Oryzias_latipes_hsok
ENSAMEG00000012598	TRMT1	85	65.499	ENSOMEG00000019343	trmt1	86	65.499	Oryzias_melastigma
ENSAMEG00000012598	TRMT1	93	85.463	ENSOGAG00000025576	TRMT1	98	85.463	Otolemur_garnettii
ENSAMEG00000012598	TRMT1	100	72.741	ENSOARG00000009397	TRMT1	95	73.037	Ovis_aries
ENSAMEG00000012598	TRMT1	97	84.462	ENSPPRG00000012117	TRMT1	100	84.462	Panthera_pardus
ENSAMEG00000012598	TRMT1	76	94.529	ENSPTIG00000008833	TRMT1	97	94.529	Panthera_tigris_altaica
ENSAMEG00000012598	TRMT1	96	88.300	ENSPTRG00000010557	TRMT1	99	87.920	Pan_troglodytes
ENSAMEG00000012598	TRMT1	94	68.304	ENSPTRG00000050421	-	96	68.304	Pan_troglodytes
ENSAMEG00000012598	TRMT1	98	87.367	ENSPANG00000009247	TRMT1	99	87.367	Papio_anubis
ENSAMEG00000012598	TRMT1	84	73.222	ENSPANG00000034058	-	96	73.222	Papio_anubis
ENSAMEG00000012598	TRMT1	87	66.438	ENSPKIG00000005309	trmt1	85	66.438	Paramormyrops_kingsleyae
ENSAMEG00000012598	TRMT1	84	59.752	ENSPSIG00000008762	TRMT1	89	56.613	Pelodiscus_sinensis
ENSAMEG00000012598	TRMT1	85	65.210	ENSPMGG00000019764	trmt1	90	65.210	Periophthalmus_magnuspinnatus
ENSAMEG00000012598	TRMT1	96	84.341	ENSPEMG00000016247	Trmt1	100	82.883	Peromyscus_maniculatus_bairdii
ENSAMEG00000012598	TRMT1	88	58.206	ENSPMAG00000004329	trmt1	92	58.206	Petromyzon_marinus
ENSAMEG00000012598	TRMT1	95	71.981	ENSPCIG00000019273	TRMT1	99	71.981	Phascolarctos_cinereus
ENSAMEG00000012598	TRMT1	94	63.480	ENSPFOG00000008527	trmt1	98	63.480	Poecilia_formosa
ENSAMEG00000012598	TRMT1	94	63.323	ENSPLAG00000018788	trmt1	98	65.404	Poecilia_latipinna
ENSAMEG00000012598	TRMT1	94	63.679	ENSPMEG00000013120	trmt1	97	63.679	Poecilia_mexicana
ENSAMEG00000012598	TRMT1	94	62.853	ENSPREG00000000211	trmt1	95	63.224	Poecilia_reticulata
ENSAMEG00000012598	TRMT1	96	88.300	ENSPPYG00000009622	TRMT1	99	87.920	Pongo_abelii
ENSAMEG00000012598	TRMT1	96	79.134	ENSPCAG00000003698	TRMT1	99	79.134	Procavia_capensis
ENSAMEG00000012598	TRMT1	98	87.994	ENSPCOG00000008653	TRMT1	99	87.994	Propithecus_coquereli
ENSAMEG00000012598	TRMT1	97	88.991	ENSPVAG00000015076	TRMT1	99	88.991	Pteropus_vampyrus
ENSAMEG00000012598	TRMT1	85	62.892	ENSPNYG00000013960	trmt1	92	62.892	Pundamilia_nyererei
ENSAMEG00000012598	TRMT1	79	68.685	ENSPNAG00000024859	trmt1	88	68.685	Pygocentrus_nattereri
ENSAMEG00000012598	TRMT1	95	83.619	ENSRNOG00000002914	Trmt1	100	83.619	Rattus_norvegicus
ENSAMEG00000012598	TRMT1	99	87.009	ENSRBIG00000038324	TRMT1	100	87.009	Rhinopithecus_bieti
ENSAMEG00000012598	TRMT1	94	68.095	ENSRBIG00000037505	-	99	68.118	Rhinopithecus_bieti
ENSAMEG00000012598	TRMT1	99	86.858	ENSRROG00000028599	TRMT1	100	86.858	Rhinopithecus_roxellana
ENSAMEG00000012598	TRMT1	94	67.302	ENSRROG00000031847	-	98	67.341	Rhinopithecus_roxellana
ENSAMEG00000012598	TRMT1	76	36.567	YDR120C	-	92	37.009	Saccharomyces_cerevisiae
ENSAMEG00000012598	TRMT1	97	82.055	ENSSBOG00000028861	TRMT1	99	84.117	Saimiri_boliviensis_boliviensis
ENSAMEG00000012598	TRMT1	87	77.342	ENSSHAG00000014381	TRMT1	97	75.993	Sarcophilus_harrisii
ENSAMEG00000012598	TRMT1	86	67.069	ENSSFOG00015004139	trmt1	85	67.185	Scleropages_formosus
ENSAMEG00000012598	TRMT1	87	67.009	ENSSMAG00000021136	trmt1	87	67.009	Scophthalmus_maximus
ENSAMEG00000012598	TRMT1	85	66.958	ENSSDUG00000012740	trmt1	84	66.783	Seriola_dumerili
ENSAMEG00000012598	TRMT1	85	66.608	ENSSLDG00000005971	trmt1	84	66.434	Seriola_lalandi_dorsalis
ENSAMEG00000012598	TRMT1	84	85.258	ENSSARG00000005138	TRMT1	99	85.258	Sorex_araneus
ENSAMEG00000012598	TRMT1	89	53.846	ENSSPUG00000001084	TRMT1	93	54.181	Sphenodon_punctatus
ENSAMEG00000012598	TRMT1	86	64.089	ENSSPAG00000007153	trmt1	95	64.089	Stegastes_partitus
ENSAMEG00000012598	TRMT1	95	90.752	ENSSSCG00000013744	TRMT1	100	90.752	Sus_scrofa
ENSAMEG00000012598	TRMT1	88	60.697	ENSTRUG00000010700	trmt1	89	61.157	Takifugu_rubripes
ENSAMEG00000012598	TRMT1	85	65.445	ENSTNIG00000018808	trmt1	98	65.445	Tetraodon_nigroviridis
ENSAMEG00000012598	TRMT1	96	86.739	ENSTTRG00000006379	TRMT1	99	86.391	Tursiops_truncatus
ENSAMEG00000012598	TRMT1	97	98.925	ENSUAMG00000022911	TRMT1	99	98.925	Ursus_americanus
ENSAMEG00000012598	TRMT1	95	98.430	ENSUMAG00000006027	TRMT1	100	98.430	Ursus_maritimus
ENSAMEG00000012598	TRMT1	99	94.109	ENSVVUG00000024177	TRMT1	100	94.109	Vulpes_vulpes
ENSAMEG00000012598	TRMT1	69	71.584	ENSXETG00000033863	TRMT1	92	71.584	Xenopus_tropicalis
ENSAMEG00000012598	TRMT1	94	62.656	ENSXCOG00000015733	trmt1	98	63.027	Xiphophorus_couchianus
ENSAMEG00000012598	TRMT1	86	67.301	ENSXMAG00000013823	trmt1	98	67.703	Xiphophorus_maculatus