EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000012997 (Gene tree)
Gene ID: 100475838
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 11106 bases
Position: chrGL193943.1:24877-35982
Accession: 21642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000013751	tRNA-synt_1g	PF09334.11	1.2e-14	1	1
ENSAMEP00000013751	Anticodon_1	PF08264.13	9.5e-31	1	1
ENSAMEP00000013751	tRNA-synt_1	PF00133.22	2.8e-185	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000014323	VARS2-201	3279	-	ENSAMEP00000013751	1092 (aa)	-	G1M340

Gene Model

Click here to download ENSAMEG00000012997's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000012997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000012997	VARS2	89	51.305	ENSAMEG00000006417	VARS	81	49.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000012997	VARS2	91	51.667	ENSAPOG00000007396	vars2	95	50.376	Acanthochromis_polyacanthus
ENSAMEG00000012997	VARS2	95	51.796	ENSACIG00000004344	vars2	97	51.796	Amphilophus_citrinellus
ENSAMEG00000012997	VARS2	91	51.272	ENSAOCG00000000476	vars2	95	50.379	Amphiprion_ocellaris
ENSAMEG00000012997	VARS2	92	51.062	ENSAPEG00000008646	vars2	93	50.379	Amphiprion_percula
ENSAMEG00000012997	VARS2	91	51.808	ENSATEG00000012291	vars2	95	51.895	Anabas_testudineus
ENSAMEG00000012997	VARS2	93	58.744	ENSACAG00000022093	VARS2	95	58.501	Anolis_carolinensis
ENSAMEG00000012997	VARS2	97	86.441	ENSANAG00000038018	VARS2	99	86.441	Aotus_nancymaae
ENSAMEG00000012997	VARS2	95	51.261	ENSACLG00000018673	vars2	97	51.261	Astatotilapia_calliptera
ENSAMEG00000012997	VARS2	92	52.576	ENSAMXG00000017773	vars2	95	52.576	Astyanax_mexicanus
ENSAMEG00000012997	VARS2	97	88.140	ENSBTAG00000010698	VARS2	99	87.925	Bos_taurus
ENSAMEG00000012997	VARS2	99	84.785	ENSCJAG00000019826	VARS2	99	86.064	Callithrix_jacchus
ENSAMEG00000012997	VARS2	97	89.454	ENSCAFG00000000454	VARS2	100	89.454	Canis_familiaris
ENSAMEG00000012997	VARS2	86	89.872	ENSCAFG00020019387	VARS2	96	89.904	Canis_lupus_dingo
ENSAMEG00000012997	VARS2	97	87.951	ENSCHIG00000007847	VARS2	99	87.736	Capra_hircus
ENSAMEG00000012997	VARS2	99	84.940	ENSTSYG00000009904	VARS2	99	86.415	Carlito_syrichta
ENSAMEG00000012997	VARS2	85	83.996	ENSCAPG00000017770	VARS2	99	83.996	Cavia_aperea
ENSAMEG00000012997	VARS2	98	82.881	ENSCPOG00000021834	VARS2	99	83.067	Cavia_porcellus
ENSAMEG00000012997	VARS2	97	86.560	ENSCCAG00000037907	VARS2	99	86.535	Cebus_capucinus
ENSAMEG00000012997	VARS2	99	85.583	ENSCATG00000032554	VARS2	99	87.075	Cercocebus_atys
ENSAMEG00000012997	VARS2	97	83.522	ENSCLAG00000002889	VARS2	99	83.522	Chinchilla_lanigera
ENSAMEG00000012997	VARS2	97	86.981	ENSCSAG00000008327	VARS2	99	86.981	Chlorocebus_sabaeus
ENSAMEG00000012997	VARS2	88	63.337	ENSCPBG00000021502	VARS2	96	63.337	Chrysemys_picta_bellii
ENSAMEG00000012997	VARS2	97	86.817	ENSCANG00000014991	VARS2	99	86.817	Colobus_angolensis_palliatus
ENSAMEG00000012997	VARS2	96	81.792	ENSCGRG00001021535	Vars2	100	81.544	Cricetulus_griseus_chok1gshd
ENSAMEG00000012997	VARS2	96	81.792	ENSCGRG00000014112	Vars2	100	81.544	Cricetulus_griseus_crigri
ENSAMEG00000012997	VARS2	79	57.275	ENSCSEG00000015432	vars2	90	57.275	Cynoglossus_semilaevis
ENSAMEG00000012997	VARS2	63	53.182	ENSCVAG00000017765	vars2	98	53.182	Cyprinodon_variegatus
ENSAMEG00000012997	VARS2	93	52.224	ENSDARG00000056717	vars2	97	52.224	Danio_rerio
ENSAMEG00000012997	VARS2	77	85.969	ENSDORG00000008516	Vars2	93	85.969	Dipodomys_ordii
ENSAMEG00000012997	VARS2	97	75.566	ENSETEG00000014844	VARS2	99	75.566	Echinops_telfairi
ENSAMEG00000012997	VARS2	99	88.029	ENSEASG00005019997	VARS2	99	88.029	Equus_asinus_asinus
ENSAMEG00000012997	VARS2	97	90.274	ENSECAG00000018202	VARS2	99	90.274	Equus_caballus
ENSAMEG00000012997	VARS2	65	84.466	ENSEEUG00000012591	-	67	84.466	Erinaceus_europaeus
ENSAMEG00000012997	VARS2	91	51.744	ENSELUG00000017824	vars2	97	51.270	Esox_lucius
ENSAMEG00000012997	VARS2	97	91.055	ENSFCAG00000010531	VARS2	100	91.055	Felis_catus
ENSAMEG00000012997	VARS2	97	82.703	ENSFDAG00000017216	VARS2	99	82.703	Fukomys_damarensis
ENSAMEG00000012997	VARS2	84	51.185	ENSFHEG00000013932	vars2	94	50.156	Fundulus_heteroclitus
ENSAMEG00000012997	VARS2	86	55.567	ENSGMOG00000018960	vars2	99	55.567	Gadus_morhua
ENSAMEG00000012997	VARS2	74	49.110	ENSGAFG00000004737	vars2	87	49.110	Gambusia_affinis
ENSAMEG00000012997	VARS2	89	53.955	ENSGACG00000001464	vars2	99	53.955	Gasterosteus_aculeatus
ENSAMEG00000012997	VARS2	87	63.093	ENSGAGG00000011652	VARS2	98	63.093	Gopherus_agassizii
ENSAMEG00000012997	VARS2	97	86.509	ENSGGOG00000014587	VARS2	99	86.509	Gorilla_gorilla
ENSAMEG00000012997	VARS2	87	52.658	ENSHBUG00000002448	vars2	92	52.658	Haplochromis_burtoni
ENSAMEG00000012997	VARS2	97	81.955	ENSHGLG00000012886	VARS2	96	81.955	Heterocephalus_glaber_female
ENSAMEG00000012997	VARS2	97	81.827	ENSHGLG00100016535	VARS2	99	81.827	Heterocephalus_glaber_male
ENSAMEG00000012997	VARS2	66	49.393	ENSHCOG00000017907	vars2	94	51.831	Hippocampus_comes
ENSAMEG00000012997	VARS2	89	54.254	ENSIPUG00000015573	Vars2	97	52.812	Ictalurus_punctatus
ENSAMEG00000012997	VARS2	97	86.119	ENSSTOG00000009924	VARS2	99	86.119	Ictidomys_tridecemlineatus
ENSAMEG00000012997	VARS2	97	81.930	ENSJJAG00000011144	Vars2	99	81.930	Jaculus_jaculus
ENSAMEG00000012997	VARS2	92	51.393	ENSKMAG00000001393	vars2	96	51.426	Kryptolebias_marmoratus
ENSAMEG00000012997	VARS2	92	51.594	ENSLBEG00000011949	vars2	96	51.333	Labrus_bergylta
ENSAMEG00000012997	VARS2	51	64.144	ENSLBEG00000005480	-	81	64.130	Labrus_bergylta
ENSAMEG00000012997	VARS2	92	53.107	ENSLACG00000001576	-	99	53.204	Latimeria_chalumnae
ENSAMEG00000012997	VARS2	97	85.389	ENSLAFG00000015183	VARS2	99	85.389	Loxodonta_africana
ENSAMEG00000012997	VARS2	97	86.509	ENSMFAG00000042367	VARS2	99	86.509	Macaca_fascicularis
ENSAMEG00000012997	VARS2	97	86.604	ENSMMUG00000018609	VARS2	99	86.604	Macaca_mulatta
ENSAMEG00000012997	VARS2	97	86.981	ENSMNEG00000043163	VARS2	99	86.981	Macaca_nemestrina
ENSAMEG00000012997	VARS2	99	85.767	ENSMLEG00000041728	VARS2	99	85.767	Mandrillus_leucophaeus
ENSAMEG00000012997	VARS2	93	51.147	ENSMAMG00000020339	vars2	97	50.615	Mastacembelus_armatus
ENSAMEG00000012997	VARS2	95	51.167	ENSMZEG00005017669	vars2	97	51.167	Maylandia_zebra
ENSAMEG00000012997	VARS2	97	82.220	ENSMAUG00000018946	Vars2	100	82.220	Mesocricetus_auratus
ENSAMEG00000012997	VARS2	82	87.892	ENSMICG00000005365	VARS2	100	87.892	Microcebus_murinus
ENSAMEG00000012997	VARS2	91	85.212	ENSMOCG00000014607	Vars2	100	85.212	Microtus_ochrogaster
ENSAMEG00000012997	VARS2	89	52.983	ENSMMOG00000012122	vars2	97	51.445	Mola_mola
ENSAMEG00000012997	VARS2	97	75.187	ENSMODG00000015848	VARS2	99	75.187	Monodelphis_domestica
ENSAMEG00000012997	VARS2	90	52.959	ENSMALG00000009217	vars2	98	52.794	Monopterus_albus
ENSAMEG00000012997	VARS2	97	82.015	MGP_CAROLIEiJ_G0021529	Vars2	100	82.015	Mus_caroli
ENSAMEG00000012997	VARS2	97	81.827	ENSMUSG00000038838	Vars2	100	81.827	Mus_musculus
ENSAMEG00000012997	VARS2	97	82.486	MGP_PahariEiJ_G0020523	Vars2	100	82.486	Mus_pahari
ENSAMEG00000012997	VARS2	97	81.921	MGP_SPRETEiJ_G0022436	Vars2	100	81.921	Mus_spretus
ENSAMEG00000012997	VARS2	97	92.373	ENSMPUG00000011643	VARS2	100	92.373	Mustela_putorius_furo
ENSAMEG00000012997	VARS2	97	84.407	ENSMLUG00000002356	VARS2	97	84.407	Myotis_lucifugus
ENSAMEG00000012997	VARS2	96	76.431	ENSNGAG00000020607	Vars2	100	75.985	Nannospalax_galili
ENSAMEG00000012997	VARS2	59	49.862	ENSNBRG00000001624	vars2	57	51.934	Neolamprologus_brichardi
ENSAMEG00000012997	VARS2	99	81.910	ENSNLEG00000005625	VARS2	99	81.910	Nomascus_leucogenys
ENSAMEG00000012997	VARS2	76	74.124	ENSMEUG00000014475	VARS2	89	74.124	Notamacropus_eugenii
ENSAMEG00000012997	VARS2	87	79.646	ENSOPRG00000000682	VARS2	90	79.646	Ochotona_princeps
ENSAMEG00000012997	VARS2	97	81.415	ENSODEG00000017965	VARS2	99	81.415	Octodon_degus
ENSAMEG00000012997	VARS2	90	38.335	ENSONIG00000004734	vars2	97	38.335	Oreochromis_niloticus
ENSAMEG00000012997	VARS2	73	94.118	ENSOANG00000000398	-	98	94.118	Ornithorhynchus_anatinus
ENSAMEG00000012997	VARS2	97	78.864	ENSOCUG00000021496	VARS2	64	78.864	Oryctolagus_cuniculus
ENSAMEG00000012997	VARS2	90	52.334	ENSORLG00000010632	vars2	95	51.231	Oryzias_latipes
ENSAMEG00000012997	VARS2	91	51.805	ENSORLG00020018584	vars2	95	50.992	Oryzias_latipes_hni
ENSAMEG00000012997	VARS2	91	51.707	ENSORLG00015010408	vars2	95	50.945	Oryzias_latipes_hsok
ENSAMEG00000012997	VARS2	90	52.438	ENSOMEG00000008360	vars2	95	51.084	Oryzias_melastigma
ENSAMEG00000012997	VARS2	99	85.165	ENSOGAG00000006087	VARS2	99	85.165	Otolemur_garnettii
ENSAMEG00000012997	VARS2	97	86.660	ENSOARG00000010844	VARS2	98	86.453	Ovis_aries
ENSAMEG00000012997	VARS2	99	84.658	ENSPPAG00000041141	VARS2	99	86.604	Pan_paniscus
ENSAMEG00000012997	VARS2	100	89.194	ENSPPRG00000006751	VARS2	100	89.194	Panthera_pardus
ENSAMEG00000012997	VARS2	100	89.103	ENSPTIG00000017799	VARS2	98	91.566	Panthera_tigris_altaica
ENSAMEG00000012997	VARS2	99	84.658	ENSPTRG00000034497	VARS2	99	86.604	Pan_troglodytes
ENSAMEG00000012997	VARS2	99	85.950	ENSPANG00000018481	VARS2	100	87.318	Papio_anubis
ENSAMEG00000012997	VARS2	92	54.501	ENSPKIG00000011372	vars2	97	54.083	Paramormyrops_kingsleyae
ENSAMEG00000012997	VARS2	57	68.938	ENSPSIG00000006206	VARS2	92	68.056	Pelodiscus_sinensis
ENSAMEG00000012997	VARS2	94	52.314	ENSPMGG00000000465	vars2	98	52.314	Periophthalmus_magnuspinnatus
ENSAMEG00000012997	VARS2	97	83.017	ENSPEMG00000014691	Vars2	99	83.017	Peromyscus_maniculatus_bairdii
ENSAMEG00000012997	VARS2	97	77.862	ENSPCIG00000015040	VARS2	99	77.862	Phascolarctos_cinereus
ENSAMEG00000012997	VARS2	89	52.291	ENSPFOG00000017616	vars2	95	51.406	Poecilia_formosa
ENSAMEG00000012997	VARS2	89	52.032	ENSPLAG00000019778	vars2	96	51.064	Poecilia_latipinna
ENSAMEG00000012997	VARS2	89	52.036	ENSPMEG00000011123	vars2	96	51.066	Poecilia_mexicana
ENSAMEG00000012997	VARS2	86	47.580	ENSPREG00000014998	vars2	94	46.368	Poecilia_reticulata
ENSAMEG00000012997	VARS2	97	86.698	ENSPPYG00000016424	VARS2	99	86.698	Pongo_abelii
ENSAMEG00000012997	VARS2	81	82.099	ENSPCAG00000006946	VARS2	83	82.099	Procavia_capensis
ENSAMEG00000012997	VARS2	99	84.615	ENSPCOG00000014839	VARS2	99	84.615	Propithecus_coquereli
ENSAMEG00000012997	VARS2	97	86.711	ENSPVAG00000004197	VARS2	99	86.711	Pteropus_vampyrus
ENSAMEG00000012997	VARS2	80	60.548	ENSPNYG00000010314	vars2	97	60.548	Pundamilia_nyererei
ENSAMEG00000012997	VARS2	92	53.595	ENSPNAG00000026793	vars2	95	53.595	Pygocentrus_nattereri
ENSAMEG00000012997	VARS2	97	82.298	ENSRNOG00000000833	Vars2	100	82.298	Rattus_norvegicus
ENSAMEG00000012997	VARS2	97	86.698	ENSRBIG00000032725	VARS2	99	86.698	Rhinopithecus_bieti
ENSAMEG00000012997	VARS2	97	86.698	ENSRROG00000043847	VARS2	99	86.698	Rhinopithecus_roxellana
ENSAMEG00000012997	VARS2	99	82.929	ENSSBOG00000033240	VARS2	99	82.929	Saimiri_boliviensis_boliviensis
ENSAMEG00000012997	VARS2	97	75.591	ENSSHAG00000009307	VARS2	99	75.591	Sarcophilus_harrisii
ENSAMEG00000012997	VARS2	93	53.230	ENSSFOG00015016187	vars2	98	52.292	Scleropages_formosus
ENSAMEG00000012997	VARS2	92	53.177	ENSSMAG00000020842	vars2	97	52.964	Scophthalmus_maximus
ENSAMEG00000012997	VARS2	92	52.085	ENSSDUG00000011598	vars2	95	51.625	Seriola_dumerili
ENSAMEG00000012997	VARS2	88	53.292	ENSSLDG00000015492	vars2	95	51.149	Seriola_lalandi_dorsalis
ENSAMEG00000012997	VARS2	56	90.511	ENSSARG00000003786	-	69	90.511	Sorex_araneus
ENSAMEG00000012997	VARS2	86	59.765	ENSSPUG00000014700	VARS2	94	59.765	Sphenodon_punctatus
ENSAMEG00000012997	VARS2	90	50.402	ENSSPAG00000004654	vars2	95	49.089	Stegastes_partitus
ENSAMEG00000012997	VARS2	97	87.571	ENSSSCG00000001384	VARS2	100	87.571	Sus_scrofa
ENSAMEG00000012997	VARS2	91	53.287	ENSTRUG00000005264	vars2	97	52.611	Takifugu_rubripes
ENSAMEG00000012997	VARS2	96	51.399	ENSTNIG00000005916	vars2	99	51.869	Tetraodon_nigroviridis
ENSAMEG00000012997	VARS2	51	95.522	ENSTBEG00000007976	-	53	95.522	Tupaia_belangeri
ENSAMEG00000012997	VARS2	97	75.518	ENSTTRG00000012243	VARS2	99	75.518	Tursiops_truncatus
ENSAMEG00000012997	VARS2	97	95.390	ENSUAMG00000026124	VARS2	100	96.312	Ursus_americanus
ENSAMEG00000012997	VARS2	97	96.234	ENSUMAG00000019894	VARS2	100	96.234	Ursus_maritimus
ENSAMEG00000012997	VARS2	97	90.132	ENSVVUG00000010754	VARS2	95	90.132	Vulpes_vulpes
ENSAMEG00000012997	VARS2	87	55.198	ENSXETG00000003036	vars2	99	55.198	Xenopus_tropicalis
ENSAMEG00000012997	VARS2	87	53.575	ENSXCOG00000003455	vars2	95	52.152	Xiphophorus_couchianus
ENSAMEG00000012997	VARS2	89	51.826	ENSXMAG00000013523	vars2	96	50.672	Xiphophorus_maculatus