EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000013756 (Gene tree)
Gene ID: 100475056
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 52974 bases
Position: chrGL192595.1:977105-1030078
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000014500	Ago_hook	PF10427.9	7.9e-21	1	1
ENSAMEP00000014500	RRM_1	PF00076.22	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000015105	TNRC6C-201	5388	-	ENSAMEP00000014500	1795 (aa)	-	G1M583

Gene Model

Click here to download ENSAMEG00000013756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000013756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000013756	TNRC6C	99	44.504	ENSAMEG00000009333	TNRC6A	92	44.290
ENSAMEG00000013756	TNRC6C	99	37.374	ENSAMEG00000011025	TNRC6B	91	37.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000013756	TNRC6C	99	89.583	ENSG00000078687	TNRC6C	100	92.632	Homo_sapiens
ENSAMEG00000013756	TNRC6C	77	52.683	ENSAPOG00000019749	tnrc6c1	98	48.576	Acanthochromis_polyacanthus
ENSAMEG00000013756	TNRC6C	97	52.338	ENSACIG00000008075	tnrc6c1	98	53.466	Amphilophus_citrinellus
ENSAMEG00000013756	TNRC6C	75	64.072	ENSAOCG00000023968	tnrc6c1	99	48.301	Amphiprion_ocellaris
ENSAMEG00000013756	TNRC6C	77	52.108	ENSAPEG00000009020	tnrc6c1	99	48.453	Amphiprion_percula
ENSAMEG00000013756	TNRC6C	100	87.431	ENSAPLG00000005456	TNRC6C	94	87.209	Anas_platyrhynchos
ENSAMEG00000013756	TNRC6C	100	86.022	ENSACAG00000016198	TNRC6C	92	86.022	Anolis_carolinensis
ENSAMEG00000013756	TNRC6C	99	88.628	ENSANAG00000021554	TNRC6C	100	87.014	Aotus_nancymaae
ENSAMEG00000013756	TNRC6C	99	47.597	ENSACLG00000000424	tnrc6c1	98	51.740	Astatotilapia_calliptera
ENSAMEG00000013756	TNRC6C	99	87.260	ENSBTAG00000018658	TNRC6C	100	87.622	Bos_taurus
ENSAMEG00000013756	TNRC6C	99	88.682	ENSCJAG00000019431	TNRC6C	100	87.128	Callithrix_jacchus
ENSAMEG00000013756	TNRC6C	99	94.772	ENSCAFG00000005224	TNRC6C	100	89.900	Canis_familiaris
ENSAMEG00000013756	TNRC6C	99	94.411	ENSCAFG00020006661	TNRC6C	100	91.284	Canis_lupus_dingo
ENSAMEG00000013756	TNRC6C	99	86.744	ENSCHIG00000026004	TNRC6C	100	84.558	Capra_hircus
ENSAMEG00000013756	TNRC6C	96	89.868	ENSTSYG00000005403	TNRC6C	100	89.983	Carlito_syrichta
ENSAMEG00000013756	TNRC6C	99	79.267	ENSCAPG00000007307	TNRC6C	93	79.539	Cavia_aperea
ENSAMEG00000013756	TNRC6C	99	84.465	ENSCPOG00000000467	TNRC6C	99	84.980	Cavia_porcellus
ENSAMEG00000013756	TNRC6C	99	89.120	ENSCCAG00000030524	TNRC6C	100	89.645	Cebus_capucinus
ENSAMEG00000013756	TNRC6C	99	89.120	ENSCATG00000033135	TNRC6C	100	89.667	Cercocebus_atys
ENSAMEG00000013756	TNRC6C	99	86.264	ENSCLAG00000011139	TNRC6C	93	86.264	Chinchilla_lanigera
ENSAMEG00000013756	TNRC6C	99	89.456	ENSCSAG00000005167	TNRC6C	93	89.697	Chlorocebus_sabaeus
ENSAMEG00000013756	TNRC6C	76	84.874	ENSCHOG00000000088	TNRC6C	75	84.874	Choloepus_hoffmanni
ENSAMEG00000013756	TNRC6C	99	84.517	ENSCPBG00000027960	TNRC6C	100	84.465	Chrysemys_picta_bellii
ENSAMEG00000013756	TNRC6C	99	88.846	ENSCANG00000041771	TNRC6C	100	89.245	Colobus_angolensis_palliatus
ENSAMEG00000013756	TNRC6C	99	84.308	ENSCGRG00001022686	Tnrc6c	100	83.600	Cricetulus_griseus_chok1gshd
ENSAMEG00000013756	TNRC6C	99	84.679	ENSCGRG00000018041	Tnrc6c	100	83.600	Cricetulus_griseus_crigri
ENSAMEG00000013756	TNRC6C	52	59.053	ENSCSEG00000012744	tnrc6c1	95	46.974	Cynoglossus_semilaevis
ENSAMEG00000013756	TNRC6C	99	51.868	ENSDARG00000076847	tnrc6c1	96	54.860	Danio_rerio
ENSAMEG00000013756	TNRC6C	99	88.029	ENSDNOG00000003247	TNRC6C	95	88.099	Dasypus_novemcinctus
ENSAMEG00000013756	TNRC6C	99	81.281	ENSDORG00000004558	Tnrc6c	100	82.155	Dipodomys_ordii
ENSAMEG00000013756	TNRC6C	89	76.515	ENSETEG00000005527	TNRC6C	89	76.949	Echinops_telfairi
ENSAMEG00000013756	TNRC6C	96	88.367	ENSEASG00005004799	TNRC6C	100	88.563	Equus_asinus_asinus
ENSAMEG00000013756	TNRC6C	99	90.319	ENSECAG00000012486	TNRC6C	94	90.568	Equus_caballus
ENSAMEG00000013756	TNRC6C	95	92.373	ENSEEUG00000010008	TNRC6C	96	92.373	Erinaceus_europaeus
ENSAMEG00000013756	TNRC6C	100	90.615	ENSFCAG00000028358	TNRC6C	100	88.889	Felis_catus
ENSAMEG00000013756	TNRC6C	96	85.520	ENSFALG00000000848	TNRC6C	100	85.236	Ficedula_albicollis
ENSAMEG00000013756	TNRC6C	99	86.414	ENSFDAG00000010368	TNRC6C	99	86.247	Fukomys_damarensis
ENSAMEG00000013756	TNRC6C	95	65.842	ENSFHEG00000002936	tnrc6c1	99	47.278	Fundulus_heteroclitus
ENSAMEG00000013756	TNRC6C	99	86.670	ENSGALG00000001725	TNRC6C	99	86.670	Gallus_gallus
ENSAMEG00000013756	TNRC6C	99	47.680	ENSGAFG00000019019	tnrc6c1	99	46.760	Gambusia_affinis
ENSAMEG00000013756	TNRC6C	77	51.480	ENSGACG00000012320	tnrc6c1	92	46.969	Gasterosteus_aculeatus
ENSAMEG00000013756	TNRC6C	99	86.253	ENSGAGG00000022043	TNRC6C	99	85.880	Gopherus_agassizii
ENSAMEG00000013756	TNRC6C	99	88.761	ENSGGOG00000011304	TNRC6C	100	88.985	Gorilla_gorilla
ENSAMEG00000013756	TNRC6C	99	47.872	ENSHBUG00000010846	tnrc6c1	98	52.294	Haplochromis_burtoni
ENSAMEG00000013756	TNRC6C	99	86.319	ENSHGLG00000004809	TNRC6C	93	86.154	Heterocephalus_glaber_female
ENSAMEG00000013756	TNRC6C	99	85.449	ENSHGLG00100012597	TNRC6C	93	85.558	Heterocephalus_glaber_male
ENSAMEG00000013756	TNRC6C	99	50.889	ENSIPUG00000000818	tnrc6c1	94	50.680	Ictalurus_punctatus
ENSAMEG00000013756	TNRC6C	99	85.587	ENSSTOG00000009101	TNRC6C	99	85.643	Ictidomys_tridecemlineatus
ENSAMEG00000013756	TNRC6C	99	83.324	ENSJJAG00000017055	Tnrc6c	93	83.270	Jaculus_jaculus
ENSAMEG00000013756	TNRC6C	98	48.188	ENSKMAG00000021023	tnrc6c1	97	48.691	Kryptolebias_marmoratus
ENSAMEG00000013756	TNRC6C	99	72.586	ENSLACG00000015283	TNRC6C	99	72.642	Latimeria_chalumnae
ENSAMEG00000013756	TNRC6C	100	53.177	ENSLOCG00000013377	tnrc6c1	93	54.268	Lepisosteus_oculatus
ENSAMEG00000013756	TNRC6C	100	87.674	ENSLAFG00000011122	TNRC6C	99	87.507	Loxodonta_africana
ENSAMEG00000013756	TNRC6C	99	89.174	ENSMFAG00000043943	TNRC6C	100	89.724	Macaca_fascicularis
ENSAMEG00000013756	TNRC6C	99	89.566	ENSMMUG00000011924	TNRC6C	100	87.643	Macaca_mulatta
ENSAMEG00000013756	TNRC6C	99	89.120	ENSMNEG00000030405	TNRC6C	100	87.586	Macaca_nemestrina
ENSAMEG00000013756	TNRC6C	99	89.120	ENSMLEG00000033436	TNRC6C	100	89.667	Mandrillus_leucophaeus
ENSAMEG00000013756	TNRC6C	90	52.417	ENSMAMG00000023613	tnrc6c1	97	49.914	Mastacembelus_armatus
ENSAMEG00000013756	TNRC6C	99	47.597	ENSMZEG00005010920	tnrc6c1	98	51.740	Maylandia_zebra
ENSAMEG00000013756	TNRC6C	100	80.609	ENSMGAG00000003906	TNRC6C	94	80.643	Meleagris_gallopavo
ENSAMEG00000013756	TNRC6C	96	84.514	ENSMAUG00000021618	Tnrc6c	100	84.514	Mesocricetus_auratus
ENSAMEG00000013756	TNRC6C	99	89.682	ENSMICG00000003952	TNRC6C	100	89.891	Microcebus_murinus
ENSAMEG00000013756	TNRC6C	99	86.366	ENSMOCG00000015879	Tnrc6c	99	86.265	Microtus_ochrogaster
ENSAMEG00000013756	TNRC6C	76	52.394	ENSMMOG00000005203	tnrc6c1	97	48.495	Mola_mola
ENSAMEG00000013756	TNRC6C	100	82.740	ENSMODG00000001785	TNRC6C	93	82.027	Monodelphis_domestica
ENSAMEG00000013756	TNRC6C	99	86.144	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	85.810	Mus_caroli
ENSAMEG00000013756	TNRC6C	99	85.754	ENSMUSG00000025571	Tnrc6c	99	85.420	Mus_musculus
ENSAMEG00000013756	TNRC6C	99	86.199	MGP_PahariEiJ_G0018593	Tnrc6c	99	85.865	Mus_pahari
ENSAMEG00000013756	TNRC6C	99	85.810	MGP_SPRETEiJ_G0018309	Tnrc6c	99	85.476	Mus_spretus
ENSAMEG00000013756	TNRC6C	99	92.231	ENSMPUG00000013348	TNRC6C	92	92.537	Mustela_putorius_furo
ENSAMEG00000013756	TNRC6C	99	83.379	ENSMLUG00000014431	TNRC6C	92	83.379	Myotis_lucifugus
ENSAMEG00000013756	TNRC6C	99	85.011	ENSNGAG00000012203	Tnrc6c	93	85.011	Nannospalax_galili
ENSAMEG00000013756	TNRC6C	99	48.419	ENSNBRG00000005344	tnrc6c1	98	52.706	Neolamprologus_brichardi
ENSAMEG00000013756	TNRC6C	99	86.823	ENSNLEG00000000047	TNRC6C	93	86.714	Nomascus_leucogenys
ENSAMEG00000013756	TNRC6C	96	77.050	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSAMEG00000013756	TNRC6C	96	86.491	ENSODEG00000012499	TNRC6C	100	86.262	Octodon_degus
ENSAMEG00000013756	TNRC6C	90	49.470	ENSONIG00000002210	tnrc6c1	96	52.120	Oreochromis_niloticus
ENSAMEG00000013756	TNRC6C	99	79.710	ENSOANG00000009758	-	94	79.710	Ornithorhynchus_anatinus
ENSAMEG00000013756	TNRC6C	98	46.558	ENSORLG00000009837	tnrc6c1	100	68.773	Oryzias_latipes
ENSAMEG00000013756	TNRC6C	98	47.321	ENSORLG00020016510	tnrc6c1	100	47.627	Oryzias_latipes_hni
ENSAMEG00000013756	TNRC6C	78	41.750	ENSORLG00015000171	tnrc6c1	98	42.779	Oryzias_latipes_hsok
ENSAMEG00000013756	TNRC6C	99	47.311	ENSOMEG00000000357	tnrc6c1	99	47.474	Oryzias_melastigma
ENSAMEG00000013756	TNRC6C	96	87.979	ENSOGAG00000007197	TNRC6C	100	88.094	Otolemur_garnettii
ENSAMEG00000013756	TNRC6C	96	83.821	ENSOARG00000006041	TNRC6C	91	83.908	Ovis_aries
ENSAMEG00000013756	TNRC6C	99	89.468	ENSPPAG00000027160	TNRC6C	100	89.724	Pan_paniscus
ENSAMEG00000013756	TNRC6C	100	90.670	ENSPPRG00000018881	TNRC6C	100	88.946	Panthera_pardus
ENSAMEG00000013756	TNRC6C	91	87.459	ENSPTIG00000008791	TNRC6C	87	87.459	Panthera_tigris_altaica
ENSAMEG00000013756	TNRC6C	99	89.468	ENSPTRG00000009699	TNRC6C	100	89.724	Pan_troglodytes
ENSAMEG00000013756	TNRC6C	99	89.174	ENSPANG00000019994	TNRC6C	100	87.715	Papio_anubis
ENSAMEG00000013756	TNRC6C	92	52.563	ENSPKIG00000005428	tnrc6c1	98	51.471	Paramormyrops_kingsleyae
ENSAMEG00000013756	TNRC6C	99	82.822	ENSPSIG00000018069	TNRC6C	99	82.711	Pelodiscus_sinensis
ENSAMEG00000013756	TNRC6C	63	58.351	ENSPMGG00000022911	tnrc6c1	97	63.265	Periophthalmus_magnuspinnatus
ENSAMEG00000013756	TNRC6C	99	85.238	ENSPEMG00000009785	Tnrc6c	100	83.429	Peromyscus_maniculatus_bairdii
ENSAMEG00000013756	TNRC6C	54	81.837	ENSPCIG00000017421	-	99	81.827	Phascolarctos_cinereus
ENSAMEG00000013756	TNRC6C	99	47.732	ENSPFOG00000012560	tnrc6c1	97	54.435	Poecilia_formosa
ENSAMEG00000013756	TNRC6C	93	49.741	ENSPLAG00000021055	tnrc6c1	97	49.280	Poecilia_latipinna
ENSAMEG00000013756	TNRC6C	99	89.786	ENSPPYG00000008679	TNRC6C	92	89.896	Pongo_abelii
ENSAMEG00000013756	TNRC6C	88	87.168	ENSPCAG00000012510	TNRC6C	90	87.554	Procavia_capensis
ENSAMEG00000013756	TNRC6C	96	90.160	ENSPCOG00000021451	TNRC6C	100	90.275	Propithecus_coquereli
ENSAMEG00000013756	TNRC6C	95	95.763	ENSPVAG00000002008	TNRC6C	95	95.763	Pteropus_vampyrus
ENSAMEG00000013756	TNRC6C	99	47.253	ENSPNYG00000014477	tnrc6c1	98	51.308	Pundamilia_nyererei
ENSAMEG00000013756	TNRC6C	96	85.657	ENSRNOG00000022395	Tnrc6c	100	85.486	Rattus_norvegicus
ENSAMEG00000013756	TNRC6C	99	89.010	ENSRBIG00000027777	TNRC6C	100	89.416	Rhinopithecus_bieti
ENSAMEG00000013756	TNRC6C	99	89.065	ENSRROG00000042912	TNRC6C	100	89.474	Rhinopithecus_roxellana
ENSAMEG00000013756	TNRC6C	99	88.354	ENSSBOG00000023981	TNRC6C	100	88.673	Saimiri_boliviensis_boliviensis
ENSAMEG00000013756	TNRC6C	52	88.806	ENSSHAG00000018330	-	100	88.060	Sarcophilus_harrisii
ENSAMEG00000013756	TNRC6C	87	56.367	ENSSFOG00015004735	-	99	59.250	Scleropages_formosus
ENSAMEG00000013756	TNRC6C	70	65.140	ENSSFOG00015006475	tnrc6c1	95	50.367	Scleropages_formosus
ENSAMEG00000013756	TNRC6C	99	45.928	ENSSMAG00000012761	tnrc6c1	99	48.394	Scophthalmus_maximus
ENSAMEG00000013756	TNRC6C	99	48.032	ENSSDUG00000002366	tnrc6c1	98	48.911	Seriola_dumerili
ENSAMEG00000013756	TNRC6C	52	60.103	ENSSLDG00000025613	tnrc6c1	97	48.635	Seriola_lalandi_dorsalis
ENSAMEG00000013756	TNRC6C	90	94.118	ENSSARG00000006816	TNRC6C	91	94.118	Sorex_araneus
ENSAMEG00000013756	TNRC6C	79	84.599	ENSSPUG00000007341	TNRC6C	91	84.599	Sphenodon_punctatus
ENSAMEG00000013756	TNRC6C	51	61.628	ENSSPAG00000014977	tnrc6c1	98	47.040	Stegastes_partitus
ENSAMEG00000013756	TNRC6C	96	83.963	ENSSSCG00000034373	TNRC6C	100	92.407	Sus_scrofa
ENSAMEG00000013756	TNRC6C	99	84.560	ENSTGUG00000007733	TNRC6C	99	84.448	Taeniopygia_guttata
ENSAMEG00000013756	TNRC6C	76	53.766	ENSTRUG00000011685	tnrc6c1	100	48.468	Takifugu_rubripes
ENSAMEG00000013756	TNRC6C	95	51.734	ENSTNIG00000005273	tnrc6c1	100	59.593	Tetraodon_nigroviridis
ENSAMEG00000013756	TNRC6C	62	81.235	ENSTBEG00000005046	TNRC6C	95	81.905	Tupaia_belangeri
ENSAMEG00000013756	TNRC6C	99	88.468	ENSTTRG00000010828	TNRC6C	99	88.245	Tursiops_truncatus
ENSAMEG00000013756	TNRC6C	99	93.366	ENSUMAG00000013614	TNRC6C	94	93.674	Ursus_maritimus
ENSAMEG00000013756	TNRC6C	51	76.073	ENSVPAG00000006765	-	99	76.160	Vicugna_pacos
ENSAMEG00000013756	TNRC6C	96	92.775	ENSVVUG00000015268	TNRC6C	100	93.038	Vulpes_vulpes
ENSAMEG00000013756	TNRC6C	96	71.900	ENSXETG00000019470	tnrc6c	100	71.388	Xenopus_tropicalis
ENSAMEG00000013756	TNRC6C	99	48.065	ENSXMAG00000025971	tnrc6c1	99	46.501	Xiphophorus_maculatus