EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000013809 (Gene tree)
Gene ID: 100477819
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 24077 bases
Position: chrGL192720.1:818032-842108
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000014570	SF3b1	PF08920.10	3.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000015176	SF3B1-201	3918	-	ENSAMEP00000014570	1305 (aa)	-	G1M5F2

Gene Model

Click here to download ENSAMEG00000013809's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000013809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000013809	SF3B1	99	99.923	ENSG00000115524	SF3B1	99	99.923	Homo_sapiens
ENSAMEG00000013809	SF3B1	99	93.645	ENSAPOG00000011894	sf3b1	99	93.506	Acanthochromis_polyacanthus
ENSAMEG00000013809	SF3B1	99	93.098	ENSACIG00000020910	sf3b1	96	92.945	Amphilophus_citrinellus
ENSAMEG00000013809	SF3B1	99	93.506	ENSAOCG00000004478	sf3b1	99	93.506	Amphiprion_ocellaris
ENSAMEG00000013809	SF3B1	99	93.506	ENSAPEG00000012937	sf3b1	99	93.506	Amphiprion_percula
ENSAMEG00000013809	SF3B1	99	93.640	ENSATEG00000020435	sf3b1	99	93.640	Anabas_testudineus
ENSAMEG00000013809	SF3B1	100	98.621	ENSAPLG00000003993	SF3B1	100	98.621	Anas_platyrhynchos
ENSAMEG00000013809	SF3B1	99	98.843	ENSACAG00000009612	SF3B1	99	98.843	Anolis_carolinensis
ENSAMEG00000013809	SF3B1	99	99.923	ENSANAG00000021577	SF3B1	100	100.000	Aotus_nancymaae
ENSAMEG00000013809	SF3B1	99	92.737	ENSACLG00000023470	sf3b1	99	92.584	Astatotilapia_calliptera
ENSAMEG00000013809	SF3B1	99	94.037	ENSAMXG00000002219	sf3b1	99	93.884	Astyanax_mexicanus
ENSAMEG00000013809	SF3B1	99	99.846	ENSBTAG00000008915	SF3B1	99	99.846	Bos_taurus
ENSAMEG00000013809	SF3B1	98	66.390	WBGene00011605	sftb-1	98	66.466	Caenorhabditis_elegans
ENSAMEG00000013809	SF3B1	99	99.923	ENSCJAG00000003902	SF3B1	99	99.923	Callithrix_jacchus
ENSAMEG00000013809	SF3B1	99	99.923	ENSCAFG00000010826	SF3B1	99	99.923	Canis_familiaris
ENSAMEG00000013809	SF3B1	99	99.923	ENSCAFG00020004750	SF3B1	99	99.923	Canis_lupus_dingo
ENSAMEG00000013809	SF3B1	99	99.846	ENSCHIG00000015226	SF3B1	99	99.846	Capra_hircus
ENSAMEG00000013809	SF3B1	99	99.846	ENSTSYG00000009214	SF3B1	99	99.846	Carlito_syrichta
ENSAMEG00000013809	SF3B1	99	99.923	ENSCAPG00000006547	SF3B1	99	99.923	Cavia_aperea
ENSAMEG00000013809	SF3B1	99	99.923	ENSCPOG00000009353	SF3B1	100	99.923	Cavia_porcellus
ENSAMEG00000013809	SF3B1	99	99.923	ENSCCAG00000020506	SF3B1	99	99.923	Cebus_capucinus
ENSAMEG00000013809	SF3B1	99	99.923	ENSCATG00000035735	SF3B1	99	99.923	Cercocebus_atys
ENSAMEG00000013809	SF3B1	99	99.693	ENSCLAG00000014767	SF3B1	99	99.693	Chinchilla_lanigera
ENSAMEG00000013809	SF3B1	99	99.923	ENSCSAG00000011505	SF3B1	99	99.923	Chlorocebus_sabaeus
ENSAMEG00000013809	SF3B1	75	98.214	ENSCHOG00000009860	SF3B1	75	98.182	Choloepus_hoffmanni
ENSAMEG00000013809	SF3B1	99	99.151	ENSCPBG00000021902	SF3B1	99	99.322	Chrysemys_picta_bellii
ENSAMEG00000013809	SF3B1	68	77.974	ENSCING00000002558	-	99	78.683	Ciona_intestinalis
ENSAMEG00000013809	SF3B1	99	80.000	ENSCSAVG00000002559	-	99	79.604	Ciona_savignyi
ENSAMEG00000013809	SF3B1	99	99.923	ENSCANG00000029415	SF3B1	99	99.923	Colobus_angolensis_palliatus
ENSAMEG00000013809	SF3B1	99	99.923	ENSCGRG00001016990	Sf3b1	99	99.923	Cricetulus_griseus_chok1gshd
ENSAMEG00000013809	SF3B1	99	99.923	ENSCGRG00000005301	Sf3b1	99	99.923	Cricetulus_griseus_crigri
ENSAMEG00000013809	SF3B1	99	89.954	ENSCSEG00000003860	sf3b1	99	89.877	Cynoglossus_semilaevis
ENSAMEG00000013809	SF3B1	95	93.556	ENSCVAG00000003680	sf3b1	99	93.556	Cyprinodon_variegatus
ENSAMEG00000013809	SF3B1	99	93.506	ENSDARG00000056138	sf3b1	99	93.430	Danio_rerio
ENSAMEG00000013809	SF3B1	99	100.000	ENSDNOG00000011754	SF3B1	99	100.000	Dasypus_novemcinctus
ENSAMEG00000013809	SF3B1	99	97.222	ENSDORG00000002399	Sf3b1	100	97.222	Dipodomys_ordii
ENSAMEG00000013809	SF3B1	99	76.701	FBgn0031266	Sf3b1	99	76.701	Drosophila_melanogaster
ENSAMEG00000013809	SF3B1	83	99.259	ENSETEG00000009188	SF3B1	100	99.259	Echinops_telfairi
ENSAMEG00000013809	SF3B1	99	87.013	ENSEBUG00000004325	sf3b1	100	90.191	Eptatretus_burgeri
ENSAMEG00000013809	SF3B1	99	99.846	ENSEASG00005020159	SF3B1	97	99.846	Equus_asinus_asinus
ENSAMEG00000013809	SF3B1	99	99.846	ENSECAG00000021657	SF3B1	97	99.846	Equus_caballus
ENSAMEG00000013809	SF3B1	86	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSAMEG00000013809	SF3B1	99	93.014	ENSELUG00000005977	sf3b1	97	92.863	Esox_lucius
ENSAMEG00000013809	SF3B1	99	99.923	ENSFCAG00000005038	SF3B1	99	99.923	Felis_catus
ENSAMEG00000013809	SF3B1	99	99.079	ENSFALG00000004281	SF3B1	99	99.079	Ficedula_albicollis
ENSAMEG00000013809	SF3B1	99	99.923	ENSFDAG00000017510	SF3B1	99	99.923	Fukomys_damarensis
ENSAMEG00000013809	SF3B1	99	92.819	ENSFHEG00000014333	sf3b1	99	92.819	Fundulus_heteroclitus
ENSAMEG00000013809	SF3B1	99	93.415	ENSGMOG00000006773	sf3b1	99	93.415	Gadus_morhua
ENSAMEG00000013809	SF3B1	99	99.306	ENSGALG00000008038	SF3B1	99	99.306	Gallus_gallus
ENSAMEG00000013809	SF3B1	98	93.369	ENSGAFG00000000704	sf3b1	99	93.369	Gambusia_affinis
ENSAMEG00000013809	SF3B1	99	93.558	ENSGACG00000008839	sf3b1	99	93.558	Gasterosteus_aculeatus
ENSAMEG00000013809	SF3B1	99	99.151	ENSGAGG00000017478	SF3B1	99	99.151	Gopherus_agassizii
ENSAMEG00000013809	SF3B1	99	93.098	ENSGGOG00000009264	SF3B1	99	94.158	Gorilla_gorilla
ENSAMEG00000013809	SF3B1	99	92.802	ENSHBUG00000007705	sf3b1	99	92.649	Haplochromis_burtoni
ENSAMEG00000013809	SF3B1	99	99.540	ENSHGLG00000008285	-	99	99.540	Heterocephalus_glaber_female
ENSAMEG00000013809	SF3B1	99	97.546	ENSHGLG00100005535	-	99	97.546	Heterocephalus_glaber_male
ENSAMEG00000013809	SF3B1	99	92.933	ENSHCOG00000016775	sf3b1	99	92.781	Hippocampus_comes
ENSAMEG00000013809	SF3B1	99	93.884	ENSIPUG00000013171	sf3b1	99	93.884	Ictalurus_punctatus
ENSAMEG00000013809	SF3B1	99	99.923	ENSSTOG00000011034	SF3B1	99	99.923	Ictidomys_tridecemlineatus
ENSAMEG00000013809	SF3B1	99	99.845	ENSJJAG00000010903	Sf3b1	99	99.845	Jaculus_jaculus
ENSAMEG00000013809	SF3B1	99	92.988	ENSKMAG00000004009	sf3b1	99	92.912	Kryptolebias_marmoratus
ENSAMEG00000013809	SF3B1	99	93.472	ENSLBEG00000022208	sf3b1	99	93.318	Labrus_bergylta
ENSAMEG00000013809	SF3B1	100	91.945	ENSLACG00000014832	SF3B1	99	91.945	Latimeria_chalumnae
ENSAMEG00000013809	SF3B1	99	94.958	ENSLOCG00000003899	sf3b1	99	94.805	Lepisosteus_oculatus
ENSAMEG00000013809	SF3B1	99	100.000	ENSLAFG00000001956	SF3B1	99	100.000	Loxodonta_africana
ENSAMEG00000013809	SF3B1	99	99.923	ENSMMUG00000022430	SF3B1	99	99.615	Macaca_mulatta
ENSAMEG00000013809	SF3B1	99	99.923	ENSMNEG00000042333	SF3B1	100	100.000	Macaca_nemestrina
ENSAMEG00000013809	SF3B1	95	93.403	ENSMLEG00000026141	SF3B1	99	93.952	Mandrillus_leucophaeus
ENSAMEG00000013809	SF3B1	99	93.502	ENSMAMG00000010241	sf3b1	99	93.502	Mastacembelus_armatus
ENSAMEG00000013809	SF3B1	99	92.737	ENSMZEG00005021254	sf3b1	99	92.584	Maylandia_zebra
ENSAMEG00000013809	SF3B1	99	98.537	ENSMGAG00000007017	SF3B1	99	98.537	Meleagris_gallopavo
ENSAMEG00000013809	SF3B1	99	95.542	ENSMAUG00000009071	Sf3b1	99	95.542	Mesocricetus_auratus
ENSAMEG00000013809	SF3B1	100	99.387	ENSMICG00000013879	SF3B1	99	99.846	Microcebus_murinus
ENSAMEG00000013809	SF3B1	99	95.525	ENSMOCG00000000455	Sf3b1	99	95.525	Microtus_ochrogaster
ENSAMEG00000013809	SF3B1	83	93.008	ENSMMOG00000000475	sf3b1	99	93.008	Mola_mola
ENSAMEG00000013809	SF3B1	99	99.228	ENSMODG00000012275	SF3B1	99	99.228	Monodelphis_domestica
ENSAMEG00000013809	SF3B1	99	93.425	ENSMALG00000017211	sf3b1	99	93.425	Monopterus_albus
ENSAMEG00000013809	SF3B1	99	99.923	MGP_CAROLIEiJ_G0014141	Sf3b1	99	99.923	Mus_caroli
ENSAMEG00000013809	SF3B1	99	99.923	ENSMUSG00000025982	Sf3b1	99	99.923	Mus_musculus
ENSAMEG00000013809	SF3B1	99	99.923	MGP_SPRETEiJ_G0014947	Sf3b1	99	99.923	Mus_spretus
ENSAMEG00000013809	SF3B1	99	99.923	ENSMPUG00000007799	SF3B1	99	99.923	Mustela_putorius_furo
ENSAMEG00000013809	SF3B1	99	98.688	ENSMLUG00000000840	SF3B1	99	98.688	Myotis_lucifugus
ENSAMEG00000013809	SF3B1	99	99.923	ENSNGAG00000021884	-	99	99.923	Nannospalax_galili
ENSAMEG00000013809	SF3B1	99	89.119	ENSNBRG00000015816	sf3b1	99	89.119	Neolamprologus_brichardi
ENSAMEG00000013809	SF3B1	99	99.923	ENSNLEG00000006861	SF3B1	99	99.923	Nomascus_leucogenys
ENSAMEG00000013809	SF3B1	70	100.000	ENSMEUG00000015848	-	67	100.000	Notamacropus_eugenii
ENSAMEG00000013809	SF3B1	99	87.963	ENSOPRG00000008596	SF3B1	99	87.963	Ochotona_princeps
ENSAMEG00000013809	SF3B1	99	99.923	ENSODEG00000011153	-	99	99.923	Octodon_degus
ENSAMEG00000013809	SF3B1	99	92.737	ENSONIG00000013758	sf3b1	99	92.584	Oreochromis_niloticus
ENSAMEG00000013809	SF3B1	83	98.985	ENSOCUG00000012722	-	96	98.985	Oryctolagus_cuniculus
ENSAMEG00000013809	SF3B1	99	93.272	ENSORLG00000020219	sf3b1	99	93.272	Oryzias_latipes
ENSAMEG00000013809	SF3B1	99	93.272	ENSORLG00020001746	sf3b1	99	93.272	Oryzias_latipes_hni
ENSAMEG00000013809	SF3B1	63	90.745	ENSORLG00015001759	sf3b1	97	90.745	Oryzias_latipes_hsok
ENSAMEG00000013809	SF3B1	99	93.277	ENSOMEG00000019231	sf3b1	99	93.277	Oryzias_melastigma
ENSAMEG00000013809	SF3B1	99	99.846	ENSOARG00000015374	SF3B1	99	99.846	Ovis_aries
ENSAMEG00000013809	SF3B1	99	99.923	ENSPPAG00000035007	SF3B1	99	99.923	Pan_paniscus
ENSAMEG00000013809	SF3B1	99	99.923	ENSPPRG00000009090	SF3B1	99	99.923	Panthera_pardus
ENSAMEG00000013809	SF3B1	99	99.923	ENSPTIG00000021557	SF3B1	99	99.923	Panthera_tigris_altaica
ENSAMEG00000013809	SF3B1	99	91.385	ENSPTRG00000012771	SF3B1	99	91.385	Pan_troglodytes
ENSAMEG00000013809	SF3B1	99	99.923	ENSPANG00000013417	SF3B1	99	99.923	Papio_anubis
ENSAMEG00000013809	SF3B1	99	94.946	ENSPKIG00000000784	sf3b1	99	94.793	Paramormyrops_kingsleyae
ENSAMEG00000013809	SF3B1	99	97.915	ENSPSIG00000017222	SF3B1	98	97.915	Pelodiscus_sinensis
ENSAMEG00000013809	SF3B1	90	93.893	ENSPMGG00000004330	sf3b1	98	93.723	Periophthalmus_magnuspinnatus
ENSAMEG00000013809	SF3B1	99	99.923	ENSPEMG00000010699	Sf3b1	100	99.923	Peromyscus_maniculatus_bairdii
ENSAMEG00000013809	SF3B1	99	90.145	ENSPMAG00000001311	sf3b1	99	90.298	Petromyzon_marinus
ENSAMEG00000013809	SF3B1	99	99.151	ENSPCIG00000010642	SF3B1	99	99.151	Phascolarctos_cinereus
ENSAMEG00000013809	SF3B1	99	93.206	ENSPFOG00000000073	sf3b1	99	93.206	Poecilia_formosa
ENSAMEG00000013809	SF3B1	99	93.277	ENSPLAG00000002293	sf3b1	99	93.277	Poecilia_latipinna
ENSAMEG00000013809	SF3B1	99	93.277	ENSPMEG00000000446	sf3b1	97	93.277	Poecilia_mexicana
ENSAMEG00000013809	SF3B1	99	93.354	ENSPREG00000019652	sf3b1	99	93.354	Poecilia_reticulata
ENSAMEG00000013809	SF3B1	99	98.814	ENSPPYG00000013044	SF3B1	96	98.814	Pongo_abelii
ENSAMEG00000013809	SF3B1	99	99.769	ENSPCAG00000009292	SF3B1	99	99.769	Procavia_capensis
ENSAMEG00000013809	SF3B1	99	99.846	ENSPCOG00000024074	SF3B1	99	99.846	Propithecus_coquereli
ENSAMEG00000013809	SF3B1	99	99.923	ENSPVAG00000008302	SF3B1	99	99.923	Pteropus_vampyrus
ENSAMEG00000013809	SF3B1	99	92.737	ENSPNYG00000014939	sf3b1	99	92.584	Pundamilia_nyererei
ENSAMEG00000013809	SF3B1	99	93.884	ENSPNAG00000008288	sf3b1	99	93.884	Pygocentrus_nattereri
ENSAMEG00000013809	SF3B1	99	99.923	ENSRNOG00000013516	Sf3b1	99	99.923	Rattus_norvegicus
ENSAMEG00000013809	SF3B1	99	96.376	ENSRBIG00000026096	SF3B1	99	96.376	Rhinopithecus_bieti
ENSAMEG00000013809	SF3B1	99	99.923	ENSRROG00000031308	SF3B1	99	99.923	Rhinopithecus_roxellana
ENSAMEG00000013809	SF3B1	99	99.923	ENSSBOG00000020080	SF3B1	99	99.923	Saimiri_boliviensis_boliviensis
ENSAMEG00000013809	SF3B1	99	99.228	ENSSHAG00000017564	SF3B1	99	99.228	Sarcophilus_harrisii
ENSAMEG00000013809	SF3B1	99	94.500	ENSSFOG00015021535	sf3b1	99	94.652	Scleropages_formosus
ENSAMEG00000013809	SF3B1	99	92.835	ENSSMAG00000013977	sf3b1	98	92.683	Scophthalmus_maximus
ENSAMEG00000013809	SF3B1	99	93.272	ENSSDUG00000017422	sf3b1	99	93.272	Seriola_dumerili
ENSAMEG00000013809	SF3B1	99	93.196	ENSSLDG00000019495	sf3b1	99	93.196	Seriola_lalandi_dorsalis
ENSAMEG00000013809	SF3B1	76	100.000	ENSSARG00000007016	SF3B1	76	100.000	Sorex_araneus
ENSAMEG00000013809	SF3B1	99	98.997	ENSSPUG00000000410	SF3B1	99	98.997	Sphenodon_punctatus
ENSAMEG00000013809	SF3B1	99	93.578	ENSSPAG00000010451	sf3b1	98	93.578	Stegastes_partitus
ENSAMEG00000013809	SF3B1	90	99.492	ENSSSCG00000016075	SF3B1	100	100.000	Sus_scrofa
ENSAMEG00000013809	SF3B1	99	99.228	ENSTGUG00000010553	SF3B1	99	99.228	Taeniopygia_guttata
ENSAMEG00000013809	SF3B1	99	93.349	ENSTRUG00000015534	sf3b1	99	93.196	Takifugu_rubripes
ENSAMEG00000013809	SF3B1	87	100.000	ENSTBEG00000008714	SF3B1	92	100.000	Tupaia_belangeri
ENSAMEG00000013809	SF3B1	92	94.185	ENSTTRG00000003414	SF3B1	92	94.185	Tursiops_truncatus
ENSAMEG00000013809	SF3B1	94	95.595	ENSUAMG00000018506	SF3B1	99	99.190	Ursus_americanus
ENSAMEG00000013809	SF3B1	99	99.923	ENSUMAG00000020945	SF3B1	99	99.923	Ursus_maritimus
ENSAMEG00000013809	SF3B1	99	91.744	ENSVPAG00000005798	SF3B1	99	91.744	Vicugna_pacos
ENSAMEG00000013809	SF3B1	99	99.923	ENSVVUG00000025948	SF3B1	94	99.923	Vulpes_vulpes
ENSAMEG00000013809	SF3B1	99	96.166	ENSXETG00000013339	sf3b1	99	96.166	Xenopus_tropicalis
ENSAMEG00000013809	SF3B1	99	89.769	ENSXCOG00000018086	sf3b1	99	89.655	Xiphophorus_couchianus
ENSAMEG00000013809	SF3B1	99	93.277	ENSXMAG00000007369	sf3b1	99	93.576	Xiphophorus_maculatus