EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000013856 (Gene tree)
Gene ID: 100479623
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 94528 bases
Position: chrGL193765.1:53916-148443
Accession: 100479623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000014665	rRNA_proc-arch	PF13234.6	3e-87	1	1
ENSAMEP00000014665	DEAD	PF00270.29	3.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000015272	MTREX-201	3132	XM_002928073	ENSAMEP00000014665	1043 (aa)	XP_002928119	G1M5P7

Gene Model

Click here to download ENSAMEG00000013856's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000013856's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000013856	MTREX	88	36.674	ENSAMEG00000002078	SKIV2L	76	36.674

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000013856	MTREX	100	98.562	ENSG00000039123	MTREX	100	98.562	Homo_sapiens
ENSAMEG00000013856	MTREX	100	82.969	ENSAPOG00000007814	mtrex	100	82.969	Acanthochromis_polyacanthus
ENSAMEG00000013856	MTREX	91	87.787	ENSACIG00000015117	mtrex	96	87.787	Amphilophus_citrinellus
ENSAMEG00000013856	MTREX	100	83.064	ENSAOCG00000011884	mtrex	100	83.064	Amphiprion_ocellaris
ENSAMEG00000013856	MTREX	100	83.064	ENSAPEG00000019384	mtrex	100	83.064	Amphiprion_percula
ENSAMEG00000013856	MTREX	100	83.714	ENSATEG00000015117	mtrex	100	83.714	Anabas_testudineus
ENSAMEG00000013856	MTREX	94	93.394	ENSAPLG00000009694	MTREX	99	93.394	Anas_platyrhynchos
ENSAMEG00000013856	MTREX	100	90.796	ENSACAG00000015200	MTREX	96	90.796	Anolis_carolinensis
ENSAMEG00000013856	MTREX	100	98.658	ENSANAG00000023095	MTREX	100	98.658	Aotus_nancymaae
ENSAMEG00000013856	MTREX	100	82.588	ENSACLG00000001921	mtrex	100	82.683	Astatotilapia_calliptera
ENSAMEG00000013856	MTREX	97	81.551	ENSAMXG00000018751	mtrex	99	83.952	Astyanax_mexicanus
ENSAMEG00000013856	MTREX	100	98.562	ENSBTAG00000010518	MTREX	100	98.562	Bos_taurus
ENSAMEG00000013856	MTREX	91	53.782	WBGene00012342	mtr-4	94	53.450	Caenorhabditis_elegans
ENSAMEG00000013856	MTREX	100	97.712	ENSCJAG00000001773	MTREX	100	97.712	Callithrix_jacchus
ENSAMEG00000013856	MTREX	100	99.137	ENSCAFG00000006818	MTREX	100	99.137	Canis_familiaris
ENSAMEG00000013856	MTREX	100	99.137	ENSCAFG00020024352	MTREX	100	99.137	Canis_lupus_dingo
ENSAMEG00000013856	MTREX	100	98.754	ENSCHIG00000024413	MTREX	100	98.754	Capra_hircus
ENSAMEG00000013856	MTREX	94	98.384	ENSTSYG00000007389	MTREX	100	98.384	Carlito_syrichta
ENSAMEG00000013856	MTREX	96	73.574	ENSCAPG00000008696	MTREX	100	73.574	Cavia_aperea
ENSAMEG00000013856	MTREX	100	98.082	ENSCPOG00000009797	MTREX	100	98.082	Cavia_porcellus
ENSAMEG00000013856	MTREX	100	98.658	ENSCCAG00000014177	MTREX	100	98.658	Cebus_capucinus
ENSAMEG00000013856	MTREX	100	98.370	ENSCATG00000042153	MTREX	100	98.370	Cercocebus_atys
ENSAMEG00000013856	MTREX	100	97.891	ENSCLAG00000006622	MTREX	100	97.891	Chinchilla_lanigera
ENSAMEG00000013856	MTREX	100	93.881	ENSCSAG00000016445	MTREX	100	93.881	Chlorocebus_sabaeus
ENSAMEG00000013856	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSAMEG00000013856	MTREX	100	92.241	ENSCPBG00000026551	MTREX	94	92.625	Chrysemys_picta_bellii
ENSAMEG00000013856	MTREX	99	66.380	ENSCING00000003239	-	99	66.380	Ciona_intestinalis
ENSAMEG00000013856	MTREX	99	65.209	ENSCSAVG00000009304	-	100	69.925	Ciona_savignyi
ENSAMEG00000013856	MTREX	100	98.274	ENSCANG00000035770	MTREX	100	98.274	Colobus_angolensis_palliatus
ENSAMEG00000013856	MTREX	100	97.411	ENSCGRG00001024680	Mtrex	100	97.411	Cricetulus_griseus_chok1gshd
ENSAMEG00000013856	MTREX	100	97.411	ENSCGRG00000000307	Mtrex	100	97.411	Cricetulus_griseus_crigri
ENSAMEG00000013856	MTREX	100	81.870	ENSCSEG00000018621	mtrex	98	81.870	Cynoglossus_semilaevis
ENSAMEG00000013856	MTREX	100	83.571	ENSCVAG00000004556	mtrex	100	83.666	Cyprinodon_variegatus
ENSAMEG00000013856	MTREX	100	84.857	ENSDARG00000013457	mtrex	100	84.857	Danio_rerio
ENSAMEG00000013856	MTREX	100	96.753	ENSDNOG00000015375	MTREX	100	96.753	Dasypus_novemcinctus
ENSAMEG00000013856	MTREX	100	97.795	ENSDORG00000006782	Mtrex	100	97.795	Dipodomys_ordii
ENSAMEG00000013856	MTREX	99	62.524	FBgn0001986	Mtr4	99	62.712	Drosophila_melanogaster
ENSAMEG00000013856	MTREX	90	80.357	ENSETEG00000000727	MTREX	90	80.632	Echinops_telfairi
ENSAMEG00000013856	MTREX	99	74.231	ENSEBUG00000012869	mtrex	99	74.231	Eptatretus_burgeri
ENSAMEG00000013856	MTREX	100	98.466	ENSEASG00005013270	MTREX	100	98.466	Equus_asinus_asinus
ENSAMEG00000013856	MTREX	100	98.562	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSAMEG00000013856	MTREX	98	88.694	ENSEEUG00000000527	MTREX	100	88.694	Erinaceus_europaeus
ENSAMEG00000013856	MTREX	98	84.884	ENSELUG00000004898	mtrex	100	89.402	Esox_lucius
ENSAMEG00000013856	MTREX	100	98.945	ENSFCAG00000010575	MTREX	100	98.945	Felis_catus
ENSAMEG00000013856	MTREX	100	90.029	ENSFALG00000010850	MTREX	100	90.230	Ficedula_albicollis
ENSAMEG00000013856	MTREX	100	97.124	ENSFDAG00000011199	MTREX	100	97.124	Fukomys_damarensis
ENSAMEG00000013856	MTREX	100	83.333	ENSFHEG00000023014	mtrex	100	82.571	Fundulus_heteroclitus
ENSAMEG00000013856	MTREX	100	79.886	ENSGMOG00000014702	mtrex	100	79.886	Gadus_morhua
ENSAMEG00000013856	MTREX	100	90.988	ENSGALG00000014709	MTREX	86	90.988	Gallus_gallus
ENSAMEG00000013856	MTREX	100	83.524	ENSGAFG00000012425	mtrex	98	87.307	Gambusia_affinis
ENSAMEG00000013856	MTREX	100	79.143	ENSGACG00000016260	mtrex	96	85.326	Gasterosteus_aculeatus
ENSAMEG00000013856	MTREX	100	91.954	ENSGAGG00000020036	MTREX	100	91.954	Gopherus_agassizii
ENSAMEG00000013856	MTREX	100	98.658	ENSGGOG00000001867	MTREX	100	98.658	Gorilla_gorilla
ENSAMEG00000013856	MTREX	100	82.588	ENSHBUG00000006229	mtrex	100	82.683	Haplochromis_burtoni
ENSAMEG00000013856	MTREX	100	97.603	ENSHGLG00000019445	SKIV2L2	100	97.603	Heterocephalus_glaber_female
ENSAMEG00000013856	MTREX	100	97.603	ENSHGLG00100011833	SKIV2L2	100	97.603	Heterocephalus_glaber_male
ENSAMEG00000013856	MTREX	91	84.741	ENSHCOG00000019995	mtrex	100	84.741	Hippocampus_comes
ENSAMEG00000013856	MTREX	100	85.100	ENSIPUG00000024348	skiv2l2	100	85.387	Ictalurus_punctatus
ENSAMEG00000013856	MTREX	100	98.466	ENSSTOG00000010802	MTREX	100	98.466	Ictidomys_tridecemlineatus
ENSAMEG00000013856	MTREX	100	90.604	ENSJJAG00000020975	Mtrex	100	91.083	Jaculus_jaculus
ENSAMEG00000013856	MTREX	100	82.571	ENSKMAG00000012642	mtrex	100	82.571	Kryptolebias_marmoratus
ENSAMEG00000013856	MTREX	100	83.317	ENSLBEG00000019367	mtrex	99	85.892	Labrus_bergylta
ENSAMEG00000013856	MTREX	100	88.517	ENSLACG00000009075	MTREX	100	88.517	Latimeria_chalumnae
ENSAMEG00000013856	MTREX	100	87.081	ENSLOCG00000010186	mtrex	100	87.081	Lepisosteus_oculatus
ENSAMEG00000013856	MTREX	99	96.069	ENSLAFG00000010497	MTREX	100	96.069	Loxodonta_africana
ENSAMEG00000013856	MTREX	100	98.370	ENSMFAG00000031610	MTREX	100	98.370	Macaca_fascicularis
ENSAMEG00000013856	MTREX	100	96.938	ENSMMUG00000010379	MTREX	100	96.938	Macaca_mulatta
ENSAMEG00000013856	MTREX	100	98.370	ENSMNEG00000032746	MTREX	100	98.370	Macaca_nemestrina
ENSAMEG00000013856	MTREX	100	98.370	ENSMLEG00000041051	MTREX	100	98.370	Mandrillus_leucophaeus
ENSAMEG00000013856	MTREX	100	82.459	ENSMAMG00000016753	mtrex	96	88.321	Mastacembelus_armatus
ENSAMEG00000013856	MTREX	100	82.588	ENSMZEG00005000414	mtrex	100	82.683	Maylandia_zebra
ENSAMEG00000013856	MTREX	94	67.576	ENSMGAG00000003980	MTREX	100	67.576	Meleagris_gallopavo
ENSAMEG00000013856	MTREX	100	97.315	ENSMAUG00000010727	Mtrex	100	97.315	Mesocricetus_auratus
ENSAMEG00000013856	MTREX	100	98.945	ENSMICG00000012779	MTREX	100	98.945	Microcebus_murinus
ENSAMEG00000013856	MTREX	100	97.315	ENSMOCG00000019886	Mtrex	100	97.315	Microtus_ochrogaster
ENSAMEG00000013856	MTREX	100	81.602	ENSMMOG00000002476	mtrex	100	81.602	Mola_mola
ENSAMEG00000013856	MTREX	100	93.193	ENSMODG00000019494	MTREX	100	93.289	Monodelphis_domestica
ENSAMEG00000013856	MTREX	92	82.413	ENSMALG00000002917	mtrex	99	82.413	Monopterus_albus
ENSAMEG00000013856	MTREX	100	96.932	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.932	Mus_caroli
ENSAMEG00000013856	MTREX	100	97.124	ENSMUSG00000016018	Mtrex	100	97.124	Mus_musculus
ENSAMEG00000013856	MTREX	100	97.028	MGP_PahariEiJ_G0015967	Mtrex	100	97.028	Mus_pahari
ENSAMEG00000013856	MTREX	100	97.124	MGP_SPRETEiJ_G0019775	Mtrex	100	97.124	Mus_spretus
ENSAMEG00000013856	MTREX	100	99.521	ENSMPUG00000007619	MTREX	100	99.521	Mustela_putorius_furo
ENSAMEG00000013856	MTREX	100	97.132	ENSMLUG00000001152	MTREX	100	97.132	Myotis_lucifugus
ENSAMEG00000013856	MTREX	100	97.795	ENSNGAG00000011938	Mtrex	100	97.795	Nannospalax_galili
ENSAMEG00000013856	MTREX	100	82.778	ENSNBRG00000011293	mtrex	100	82.873	Neolamprologus_brichardi
ENSAMEG00000013856	MTREX	100	94.450	ENSNLEG00000001494	MTREX	100	94.450	Nomascus_leucogenys
ENSAMEG00000013856	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSAMEG00000013856	MTREX	100	82.071	ENSOPRG00000008009	MTREX	100	82.838	Ochotona_princeps
ENSAMEG00000013856	MTREX	100	97.220	ENSODEG00000017234	MTREX	100	97.220	Octodon_degus
ENSAMEG00000013856	MTREX	100	82.588	ENSONIG00000007587	mtrex	100	82.683	Oreochromis_niloticus
ENSAMEG00000013856	MTREX	100	98.370	ENSOCUG00000004463	MTREX	100	98.370	Oryctolagus_cuniculus
ENSAMEG00000013856	MTREX	100	82.571	ENSORLG00000005443	mtrex	100	82.571	Oryzias_latipes
ENSAMEG00000013856	MTREX	100	82.476	ENSORLG00020006329	mtrex	100	82.476	Oryzias_latipes_hni
ENSAMEG00000013856	MTREX	100	82.476	ENSORLG00015012924	mtrex	100	82.476	Oryzias_latipes_hsok
ENSAMEG00000013856	MTREX	100	81.861	ENSOMEG00000008825	mtrex	100	81.861	Oryzias_melastigma
ENSAMEG00000013856	MTREX	100	98.370	ENSOGAG00000002886	MTREX	100	98.370	Otolemur_garnettii
ENSAMEG00000013856	MTREX	100	98.470	ENSOARG00000007764	MTREX	100	98.470	Ovis_aries
ENSAMEG00000013856	MTREX	100	98.562	ENSPPAG00000039291	MTREX	100	98.562	Pan_paniscus
ENSAMEG00000013856	MTREX	100	98.945	ENSPPRG00000019701	MTREX	100	98.945	Panthera_pardus
ENSAMEG00000013856	MTREX	100	97.411	ENSPTIG00000009313	MTREX	100	97.411	Panthera_tigris_altaica
ENSAMEG00000013856	MTREX	100	98.562	ENSPTRG00000016878	MTREX	100	98.562	Pan_troglodytes
ENSAMEG00000013856	MTREX	100	98.274	ENSPANG00000009697	MTREX	100	98.274	Papio_anubis
ENSAMEG00000013856	MTREX	100	86.832	ENSPKIG00000020833	mtrex	100	86.832	Paramormyrops_kingsleyae
ENSAMEG00000013856	MTREX	100	92.050	ENSPSIG00000012150	MTREX	100	92.433	Pelodiscus_sinensis
ENSAMEG00000013856	MTREX	100	81.143	ENSPMGG00000002582	mtrex	100	81.143	Periophthalmus_magnuspinnatus
ENSAMEG00000013856	MTREX	95	65.628	ENSPMAG00000009668	mtrex	100	65.628	Petromyzon_marinus
ENSAMEG00000013856	MTREX	91	96.624	ENSPCIG00000024730	MTREX	100	96.624	Phascolarctos_cinereus
ENSAMEG00000013856	MTREX	75	87.215	ENSPFOG00000003141	mtrex	100	87.452	Poecilia_formosa
ENSAMEG00000013856	MTREX	100	83.333	ENSPLAG00000021311	mtrex	100	83.429	Poecilia_latipinna
ENSAMEG00000013856	MTREX	92	87.070	ENSPMEG00000010597	mtrex	99	87.383	Poecilia_mexicana
ENSAMEG00000013856	MTREX	100	83.048	ENSPREG00000003089	mtrex	100	83.143	Poecilia_reticulata
ENSAMEG00000013856	MTREX	98	98.635	ENSPPYG00000015469	MTREX	98	98.635	Pongo_abelii
ENSAMEG00000013856	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSAMEG00000013856	MTREX	99	92.752	ENSPCOG00000018092	MTREX	100	92.857	Propithecus_coquereli
ENSAMEG00000013856	MTREX	100	99.041	ENSPVAG00000002445	MTREX	100	99.041	Pteropus_vampyrus
ENSAMEG00000013856	MTREX	100	82.493	ENSPNYG00000006164	mtrex	100	82.588	Pundamilia_nyererei
ENSAMEG00000013856	MTREX	100	85.973	ENSPNAG00000008794	mtrex	100	86.164	Pygocentrus_nattereri
ENSAMEG00000013856	MTREX	99	96.893	ENSRNOG00000010125	Mtrex	97	96.893	Rattus_norvegicus
ENSAMEG00000013856	MTREX	100	96.644	ENSRBIG00000034930	MTREX	100	96.644	Rhinopithecus_bieti
ENSAMEG00000013856	MTREX	100	98.370	ENSRROG00000039895	MTREX	100	98.370	Rhinopithecus_roxellana
ENSAMEG00000013856	MTREX	89	55.393	YJL050W	MTR4	89	55.393	Saccharomyces_cerevisiae
ENSAMEG00000013856	MTREX	100	98.466	ENSSBOG00000026693	MTREX	100	98.466	Saimiri_boliviensis_boliviensis
ENSAMEG00000013856	MTREX	96	95.391	ENSSHAG00000004600	MTREX	100	95.391	Sarcophilus_harrisii
ENSAMEG00000013856	MTREX	100	87.297	ENSSFOG00015014355	skiv2l2	100	87.297	Scleropages_formosus
ENSAMEG00000013856	MTREX	100	82.778	ENSSMAG00000007572	mtrex	100	82.778	Scophthalmus_maximus
ENSAMEG00000013856	MTREX	100	83.603	ENSSDUG00000023789	mtrex	100	83.603	Seriola_dumerili
ENSAMEG00000013856	MTREX	100	83.508	ENSSLDG00000006301	mtrex	100	83.508	Seriola_lalandi_dorsalis
ENSAMEG00000013856	MTREX	100	94.535	ENSSARG00000008387	MTREX	100	94.535	Sorex_araneus
ENSAMEG00000013856	MTREX	100	79.598	ENSSPUG00000007071	MTREX	100	79.904	Sphenodon_punctatus
ENSAMEG00000013856	MTREX	91	87.317	ENSSPAG00000011319	mtrex	94	87.736	Stegastes_partitus
ENSAMEG00000013856	MTREX	100	99.041	ENSSSCG00000016911	MTREX	100	99.041	Sus_scrofa
ENSAMEG00000013856	MTREX	100	89.847	ENSTGUG00000002480	MTREX	100	89.847	Taeniopygia_guttata
ENSAMEG00000013856	MTREX	100	82.514	ENSTRUG00000014571	mtrex	100	82.514	Takifugu_rubripes
ENSAMEG00000013856	MTREX	100	82.263	ENSTBEG00000007769	MTREX	100	82.263	Tupaia_belangeri
ENSAMEG00000013856	MTREX	100	98.466	ENSTTRG00000008678	MTREX	100	98.466	Tursiops_truncatus
ENSAMEG00000013856	MTREX	100	99.521	ENSUAMG00000023061	MTREX	100	99.521	Ursus_americanus
ENSAMEG00000013856	MTREX	100	98.947	ENSUMAG00000009373	MTREX	100	98.947	Ursus_maritimus
ENSAMEG00000013856	MTREX	100	88.111	ENSVPAG00000011174	MTREX	100	88.111	Vicugna_pacos
ENSAMEG00000013856	MTREX	100	99.329	ENSVVUG00000021337	MTREX	100	99.329	Vulpes_vulpes
ENSAMEG00000013856	MTREX	100	88.793	ENSXETG00000032798	MTREX	100	88.793	Xenopus_tropicalis
ENSAMEG00000013856	MTREX	100	83.143	ENSXMAG00000004799	mtrex	100	83.143	Xiphophorus_maculatus