EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000013858 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 4427 bases
Position: chrGL194053.1:12236-16662
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000014600	zf-C2H2	PF00096.26	8.6e-31	1	6
ENSAMEP00000014600	zf-C2H2	PF00096.26	8.6e-31	2	6
ENSAMEP00000014600	zf-C2H2	PF00096.26	8.6e-31	3	6
ENSAMEP00000014600	zf-C2H2	PF00096.26	8.6e-31	4	6
ENSAMEP00000014600	zf-C2H2	PF00096.26	8.6e-31	5	6
ENSAMEP00000014600	zf-C2H2	PF00096.26	8.6e-31	6	6
ENSAMEP00000014600	zf-met	PF12874.7	4.1e-09	1	2
ENSAMEP00000014600	zf-met	PF12874.7	4.1e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000015206	-	576	-	ENSAMEP00000014600	192 (aa)	-	G1M5I2

Gene Model

Click here to download ENSAMEG00000013858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000013858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000013858	-	98	44.118	ENSAMEG00000007308	ZNF668	96	44.118
ENSAMEG00000013858	-	96	43.529	ENSAMEG00000010549	ZNF236	53	43.529
ENSAMEG00000013858	-	92	45.238	ENSAMEG00000012930	ZNF235	66	45.238
ENSAMEG00000013858	-	98	46.541	ENSAMEG00000006122	ZNF233	64	45.963
ENSAMEG00000013858	-	97	40.517	ENSAMEG00000000176	ZNF599	68	43.750
ENSAMEG00000013858	-	99	46.667	ENSAMEG00000012925	ZNF112	62	46.667
ENSAMEG00000013858	-	94	41.007	ENSAMEG00000005557	CPSF1	75	41.007
ENSAMEG00000013858	-	88	44.048	ENSAMEG00000003802	-	100	39.344
ENSAMEG00000013858	-	88	35.484	ENSAMEG00000015824	GTF3A	74	35.484
ENSAMEG00000013858	-	97	36.264	ENSAMEG00000007292	ZNF646	99	33.140
ENSAMEG00000013858	-	92	47.170	ENSAMEG00000009560	ZNF582	64	47.170
ENSAMEG00000013858	-	92	44.681	ENSAMEG00000001261	ZFP1	74	44.681
ENSAMEG00000013858	-	92	47.239	ENSAMEG00000003482	ZNF628	56	47.239
ENSAMEG00000013858	-	99	42.857	ENSAMEG00000008136	ZNF317	82	42.857
ENSAMEG00000013858	-	98	47.205	ENSAMEG00000007611	-	100	46.429
ENSAMEG00000013858	-	93	41.176	ENSAMEG00000012006	-	82	40.909
ENSAMEG00000013858	-	98	38.679	ENSAMEG00000014151	ZNF521	68	38.679
ENSAMEG00000013858	-	97	40.588	ENSAMEG00000017202	ZNF319	84	40.588
ENSAMEG00000013858	-	99	43.275	ENSAMEG00000014454	-	99	43.275
ENSAMEG00000013858	-	98	35.669	ENSAMEG00000009606	SNAI2	54	35.669
ENSAMEG00000013858	-	90	36.025	ENSAMEG00000003050	PRDM5	80	36.025
ENSAMEG00000013858	-	98	41.667	ENSAMEG00000002368	-	71	41.667
ENSAMEG00000013858	-	91	45.283	ENSAMEG00000020255	ZNF574	61	43.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000013858	-	76	70.345	ENSACIG00000002180	-	99	70.345	Amphilophus_citrinellus
ENSAMEG00000013858	-	89	96.471	ENSACIG00000016354	gfi1ab	51	91.053	Amphilophus_citrinellus
ENSAMEG00000013858	-	99	93.750	ENSAPLG00000015700	GFI1	55	93.750	Anas_platyrhynchos
ENSAMEG00000013858	-	59	81.416	ENSACLG00000001258	-	91	81.416	Astatotilapia_calliptera
ENSAMEG00000013858	-	96	87.568	ENSAMXG00000006669	GFI1	59	87.568	Astyanax_mexicanus
ENSAMEG00000013858	-	99	88.421	ENSAMXG00000039600	gfi1ab	50	88.421	Astyanax_mexicanus
ENSAMEG00000013858	-	84	65.031	ENSAMXG00000015228	-	51	65.031	Astyanax_mexicanus
ENSAMEG00000013858	-	92	100.000	ENSCAPG00000016268	-	100	100.000	Cavia_aperea
ENSAMEG00000013858	-	70	99.259	ENSCPBG00000015742	-	100	99.259	Chrysemys_picta_bellii
ENSAMEG00000013858	-	86	74.251	ENSCING00000011342	-	88	74.251	Ciona_intestinalis
ENSAMEG00000013858	-	92	77.160	ENSCSAVG00000005904	-	100	77.160	Ciona_savignyi
ENSAMEG00000013858	-	92	100.000	ENSCGRG00000013485	-	100	100.000	Cricetulus_griseus_crigri
ENSAMEG00000013858	-	92	100.000	ENSDORG00000023443	-	100	100.000	Dipodomys_ordii
ENSAMEG00000013858	-	89	83.529	ENSEBUG00000008075	gfi1ab	57	83.529	Eptatretus_burgeri
ENSAMEG00000013858	-	92	100.000	ENSFDAG00000019296	-	100	100.000	Fukomys_damarensis
ENSAMEG00000013858	-	92	99.259	ENSGAGG00000015899	GFI1	100	99.259	Gopherus_agassizii
ENSAMEG00000013858	-	97	88.710	ENSHCOG00000019555	GFI1	58	88.710	Hippocampus_comes
ENSAMEG00000013858	-	85	65.455	ENSIPUG00000021407	-	52	65.455	Ictalurus_punctatus
ENSAMEG00000013858	-	92	100.000	ENSJJAG00000022622	-	100	100.000	Jaculus_jaculus
ENSAMEG00000013858	-	91	78.090	ENSLACG00000017590	-	54	78.090	Latimeria_chalumnae
ENSAMEG00000013858	-	70	100.000	ENSMMUG00000005068	GFI1	100	100.000	Macaca_mulatta
ENSAMEG00000013858	-	98	94.149	ENSMGAG00000008187	GFI1	54	94.149	Meleagris_gallopavo
ENSAMEG00000013858	-	92	100.000	ENSMAUG00000021273	-	100	100.000	Mesocricetus_auratus
ENSAMEG00000013858	-	92	100.000	ENSMOCG00000004478	-	100	100.000	Microtus_ochrogaster
ENSAMEG00000013858	-	98	90.476	ENSMMOG00000005556	gfi1ab	51	90.476	Mola_mola
ENSAMEG00000013858	-	99	98.953	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSAMEG00000013858	-	99	98.953	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSAMEG00000013858	-	92	100.000	ENSNGAG00000002549	-	100	100.000	Nannospalax_galili
ENSAMEG00000013858	-	85	80.531	ENSNBRG00000010351	-	88	80.531	Neolamprologus_brichardi
ENSAMEG00000013858	-	85	78.761	ENSNBRG00000001834	-	94	78.761	Neolamprologus_brichardi
ENSAMEG00000013858	-	92	100.000	ENSODEG00000006410	-	100	100.000	Octodon_degus
ENSAMEG00000013858	-	92	98.089	ENSOANG00000022289	-	84	98.089	Ornithorhynchus_anatinus
ENSAMEG00000013858	-	97	88.710	ENSORLG00020002817	GFI1	56	88.710	Oryzias_latipes_hni
ENSAMEG00000013858	-	94	99.448	ENSOGAG00000027913	GFI1	50	99.448	Otolemur_garnettii
ENSAMEG00000013858	-	95	100.000	ENSPPAG00000042186	GFI1	50	100.000	Pan_paniscus
ENSAMEG00000013858	-	92	88.722	ENSPTIG00000002680	-	99	88.722	Panthera_tigris_altaica
ENSAMEG00000013858	-	98	94.681	ENSPSIG00000008734	GFI1	53	94.681	Pelodiscus_sinensis
ENSAMEG00000013858	-	99	89.474	ENSPMGG00000012546	gfi1ab	50	90.860	Periophthalmus_magnuspinnatus
ENSAMEG00000013858	-	95	86.885	ENSPMGG00000011041	GFI1	57	86.885	Periophthalmus_magnuspinnatus
ENSAMEG00000013858	-	99	90.000	ENSPLAG00000010879	gfi1ab	58	90.000	Poecilia_latipinna
ENSAMEG00000013858	-	95	87.363	ENSPREG00000007997	GFI1	58	87.363	Poecilia_reticulata
ENSAMEG00000013858	-	87	82.143	ENSPNYG00000001775	-	88	82.143	Pundamilia_nyererei
ENSAMEG00000013858	-	99	88.947	ENSPNAG00000027258	gfi1ab	50	88.947	Pygocentrus_nattereri
ENSAMEG00000013858	-	92	62.431	ENSPNAG00000014299	-	58	62.431	Pygocentrus_nattereri
ENSAMEG00000013858	-	85	64.242	ENSSFOG00015008114	-	51	64.242	Scleropages_formosus
ENSAMEG00000013858	-	74	65.493	ENSSMAG00000002798	-	51	65.493	Scophthalmus_maximus
ENSAMEG00000013858	-	99	90.526	ENSSDUG00000022410	gfi1ab	50	90.526	Seriola_dumerili
ENSAMEG00000013858	-	90	71.756	ENSSLDG00000017614	-	95	71.756	Seriola_lalandi_dorsalis
ENSAMEG00000013858	-	99	90.526	ENSSLDG00000020163	gfi1ab	50	90.526	Seriola_lalandi_dorsalis
ENSAMEG00000013858	-	99	91.053	ENSSPAG00000009140	gfi1ab	61	91.053	Stegastes_partitus
ENSAMEG00000013858	-	99	92.147	ENSTGUG00000006060	GFI1	55	92.147	Taeniopygia_guttata
ENSAMEG00000013858	-	92	100.000	ENSUMAG00000011251	-	100	100.000	Ursus_maritimus
ENSAMEG00000013858	-	88	92.857	ENSXCOG00000009186	-	90	92.857	Xiphophorus_couchianus
ENSAMEG00000013858	-	92	61.350	ENSXMAG00000006527	-	50	61.350	Xiphophorus_maculatus