EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMEG00000014458 (Gene tree)
Gene ID: 100470386
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 20142 bases
Position: chrGL193527.1:207435-227576
Accession: 24644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000015283	EST1	PF10374.9	7.3e-24	1	1
ENSAMEP00000015283	EST1_DNA_bind	PF10373.9	4e-40	1	2
ENSAMEP00000015283	EST1_DNA_bind	PF10373.9	4e-40	2	2
ENSAMEP00000015283	PIN_4	PF13638.6	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000015918	SMG5-201	2979	-	ENSAMEP00000015283	993 (aa)	-	G1M7G3

Gene Model

Click here to download ENSAMEG00000014458's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000014458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000014458	SMG5	100	92.749	ENSG00000198952	SMG5	98	92.749	Homo_sapiens
ENSAMEG00000014458	SMG5	100	66.232	ENSAPOG00000019690	smg5	98	65.300	Acanthochromis_polyacanthus
ENSAMEG00000014458	SMG5	100	63.158	ENSACIG00000001353	smg5	98	64.643	Amphilophus_citrinellus
ENSAMEG00000014458	SMG5	100	63.439	ENSAOCG00000019483	smg5	93	65.711	Amphiprion_ocellaris
ENSAMEG00000014458	SMG5	100	65.010	ENSAPEG00000022949	smg5	98	65.308	Amphiprion_percula
ENSAMEG00000014458	SMG5	100	64.995	ENSATEG00000005348	smg5	98	65.678	Anabas_testudineus
ENSAMEG00000014458	SMG5	100	76.316	ENSAPLG00000010263	SMG5	100	76.316	Anas_platyrhynchos
ENSAMEG00000014458	SMG5	100	92.447	ENSANAG00000032899	SMG5	99	92.440	Aotus_nancymaae
ENSAMEG00000014458	SMG5	100	63.245	ENSACLG00000009311	smg5	98	63.681	Astatotilapia_calliptera
ENSAMEG00000014458	SMG5	99	43.625	ENSBTAG00000021747	-	97	43.327	Bos_taurus
ENSAMEG00000014458	SMG5	100	92.951	ENSBTAG00000009435	SMG5	98	92.951	Bos_taurus
ENSAMEG00000014458	SMG5	100	92.749	ENSCJAG00000005684	SMG5	98	92.749	Callithrix_jacchus
ENSAMEG00000014458	SMG5	100	95.267	ENSCAFG00000016839	SMG5	98	95.267	Canis_familiaris
ENSAMEG00000014458	SMG5	100	95.267	ENSCAFG00020006061	SMG5	98	95.267	Canis_lupus_dingo
ENSAMEG00000014458	SMG5	100	92.850	ENSCHIG00000007709	SMG5	98	92.850	Capra_hircus
ENSAMEG00000014458	SMG5	99	44.266	ENSCHIG00000006323	-	98	44.422	Capra_hircus
ENSAMEG00000014458	SMG5	100	92.447	ENSTSYG00000004099	SMG5	98	92.447	Carlito_syrichta
ENSAMEG00000014458	SMG5	99	70.314	ENSCAPG00000003631	SMG5	100	71.680	Cavia_aperea
ENSAMEG00000014458	SMG5	100	90.854	ENSCPOG00000015696	SMG5	98	91.357	Cavia_porcellus
ENSAMEG00000014458	SMG5	100	92.649	ENSCCAG00000027409	SMG5	99	92.641	Cebus_capucinus
ENSAMEG00000014458	SMG5	100	92.649	ENSCATG00000030539	SMG5	98	92.649	Cercocebus_atys
ENSAMEG00000014458	SMG5	100	92.060	ENSCLAG00000003983	SMG5	98	91.960	Chinchilla_lanigera
ENSAMEG00000014458	SMG5	100	92.548	ENSCSAG00000002120	SMG5	98	92.548	Chlorocebus_sabaeus
ENSAMEG00000014458	SMG5	55	86.496	ENSCHOG00000008741	-	57	86.496	Choloepus_hoffmanni
ENSAMEG00000014458	SMG5	96	74.671	ENSCPBG00000025848	SMG5	100	75.709	Chrysemys_picta_bellii
ENSAMEG00000014458	SMG5	94	35.191	ENSCING00000008706	-	97	34.778	Ciona_intestinalis
ENSAMEG00000014458	SMG5	100	89.930	ENSCANG00000029208	SMG5	98	89.930	Colobus_angolensis_palliatus
ENSAMEG00000014458	SMG5	52	47.004	ENSCGRG00001000584	-	73	55.164	Cricetulus_griseus_chok1gshd
ENSAMEG00000014458	SMG5	100	89.045	ENSCGRG00001006336	Smg5	98	88.844	Cricetulus_griseus_chok1gshd
ENSAMEG00000014458	SMG5	100	89.045	ENSCGRG00000005111	Smg5	100	88.833	Cricetulus_griseus_crigri
ENSAMEG00000014458	SMG5	100	63.215	ENSCSEG00000014220	smg5	91	77.805	Cynoglossus_semilaevis
ENSAMEG00000014458	SMG5	100	59.344	ENSCVAG00000000529	smg5	97	59.722	Cyprinodon_variegatus
ENSAMEG00000014458	SMG5	100	88.176	ENSDNOG00000000051	SMG5	98	89.225	Dasypus_novemcinctus
ENSAMEG00000014458	SMG5	95	36.720	ENSDNOG00000039862	-	100	35.344	Dasypus_novemcinctus
ENSAMEG00000014458	SMG5	100	90.151	ENSDORG00000010382	Smg5	98	90.352	Dipodomys_ordii
ENSAMEG00000014458	SMG5	69	36.774	FBgn0019890	Smg5	62	36.774	Drosophila_melanogaster
ENSAMEG00000014458	SMG5	82	97.087	ENSETEG00000010336	SMG5	88	97.087	Echinops_telfairi
ENSAMEG00000014458	SMG5	93	46.331	ENSEBUG00000003739	smg5	98	46.539	Eptatretus_burgeri
ENSAMEG00000014458	SMG5	100	93.051	ENSEASG00005019122	SMG5	98	93.051	Equus_asinus_asinus
ENSAMEG00000014458	SMG5	100	93.051	ENSECAG00000001389	SMG5	98	93.051	Equus_caballus
ENSAMEG00000014458	SMG5	74	94.813	ENSEEUG00000012690	SMG5	73	94.813	Erinaceus_europaeus
ENSAMEG00000014458	SMG5	100	64.166	ENSELUG00000012585	smg5	98	64.596	Esox_lucius
ENSAMEG00000014458	SMG5	100	95.468	ENSFCAG00000011783	SMG5	98	95.468	Felis_catus
ENSAMEG00000014458	SMG5	60	79.833	ENSFALG00000001166	-	99	79.933	Ficedula_albicollis
ENSAMEG00000014458	SMG5	99	90.644	ENSFDAG00000017388	SMG5	100	90.543	Fukomys_damarensis
ENSAMEG00000014458	SMG5	99	60.966	ENSFHEG00000013939	smg5	94	66.134	Fundulus_heteroclitus
ENSAMEG00000014458	SMG5	100	75.486	ENSGALG00000029918	-	98	75.195	Gallus_gallus
ENSAMEG00000014458	SMG5	84	77.114	ENSGAFG00000021691	smg5	94	65.815	Gambusia_affinis
ENSAMEG00000014458	SMG5	100	59.266	ENSGACG00000013142	smg5	98	60.550	Gasterosteus_aculeatus
ENSAMEG00000014458	SMG5	100	76.893	ENSGAGG00000016131	SMG5	98	76.602	Gopherus_agassizii
ENSAMEG00000014458	SMG5	100	92.649	ENSGGOG00000010932	SMG5	98	92.649	Gorilla_gorilla
ENSAMEG00000014458	SMG5	100	62.963	ENSHBUG00000008654	smg5	98	62.840	Haplochromis_burtoni
ENSAMEG00000014458	SMG5	100	90.553	ENSHGLG00000019152	SMG5	98	90.754	Heterocephalus_glaber_female
ENSAMEG00000014458	SMG5	90	90.290	ENSHGLG00100015948	SMG5	97	90.513	Heterocephalus_glaber_male
ENSAMEG00000014458	SMG5	99	58.813	ENSHCOG00000010229	smg5	84	74.185	Hippocampus_comes
ENSAMEG00000014458	SMG5	100	59.724	ENSIPUG00000006624	Smg5	98	61.439	Ictalurus_punctatus
ENSAMEG00000014458	SMG5	100	93.253	ENSSTOG00000001780	SMG5	98	93.253	Ictidomys_tridecemlineatus
ENSAMEG00000014458	SMG5	100	89.056	ENSJJAG00000022763	Smg5	98	88.844	Jaculus_jaculus
ENSAMEG00000014458	SMG5	91	76.923	ENSKMAG00000014586	smg5	91	77.667	Kryptolebias_marmoratus
ENSAMEG00000014458	SMG5	100	64.665	ENSLBEG00000002145	smg5	98	63.870	Labrus_bergylta
ENSAMEG00000014458	SMG5	99	64.075	ENSLACG00000010521	SMG5	97	63.824	Latimeria_chalumnae
ENSAMEG00000014458	SMG5	95	79.146	ENSLOCG00000008380	smg5	90	79.146	Lepisosteus_oculatus
ENSAMEG00000014458	SMG5	99	92.641	ENSLAFG00000006241	SMG5	98	92.641	Loxodonta_africana
ENSAMEG00000014458	SMG5	100	92.548	ENSMFAG00000045357	SMG5	98	92.548	Macaca_fascicularis
ENSAMEG00000014458	SMG5	100	92.548	ENSMMUG00000000090	SMG5	98	92.548	Macaca_mulatta
ENSAMEG00000014458	SMG5	100	92.447	ENSMNEG00000044425	SMG5	98	92.447	Macaca_nemestrina
ENSAMEG00000014458	SMG5	100	86.158	ENSMLEG00000041192	SMG5	98	86.158	Mandrillus_leucophaeus
ENSAMEG00000014458	SMG5	100	59.946	ENSMAMG00000010683	smg5	100	59.322	Mastacembelus_armatus
ENSAMEG00000014458	SMG5	100	61.882	ENSMZEG00005015815	smg5	98	62.220	Maylandia_zebra
ENSAMEG00000014458	SMG5	64	57.831	ENSMZEG00005016543	smg5	100	57.943	Maylandia_zebra
ENSAMEG00000014458	SMG5	100	88.040	ENSMAUG00000010381	Smg5	98	87.839	Mesocricetus_auratus
ENSAMEG00000014458	SMG5	100	92.749	ENSMICG00000002257	SMG5	98	92.749	Microcebus_murinus
ENSAMEG00000014458	SMG5	100	87.563	ENSMOCG00000016590	Smg5	98	87.563	Microtus_ochrogaster
ENSAMEG00000014458	SMG5	100	57.664	ENSMMOG00000017199	smg5	98	58.106	Mola_mola
ENSAMEG00000014458	SMG5	94	37.317	ENSMODG00000004532	-	81	39.050	Monodelphis_domestica
ENSAMEG00000014458	SMG5	99	34.612	ENSMODG00000004511	-	99	34.412	Monodelphis_domestica
ENSAMEG00000014458	SMG5	87	86.175	ENSMODG00000016901	SMG5	96	86.936	Monodelphis_domestica
ENSAMEG00000014458	SMG5	77	39.633	ENSMODG00000004735	-	86	39.733	Monodelphis_domestica
ENSAMEG00000014458	SMG5	78	38.035	ENSMODG00000010675	-	84	38.196	Monodelphis_domestica
ENSAMEG00000014458	SMG5	100	58.733	ENSMALG00000010375	smg5	98	58.733	Monopterus_albus
ENSAMEG00000014458	SMG5	100	88.945	MGP_CAROLIEiJ_G0025163	Smg5	100	97.765	Mus_caroli
ENSAMEG00000014458	SMG5	100	88.945	ENSMUSG00000001415	Smg5	99	97.765	Mus_musculus
ENSAMEG00000014458	SMG5	100	88.554	MGP_PahariEiJ_G0026606	Smg5	100	97.765	Mus_pahari
ENSAMEG00000014458	SMG5	100	88.945	MGP_SPRETEiJ_G0026104	Smg5	100	97.765	Mus_spretus
ENSAMEG00000014458	SMG5	96	94.532	ENSMPUG00000004546	SMG5	100	94.532	Mustela_putorius_furo
ENSAMEG00000014458	SMG5	100	90.390	ENSMLUG00000008518	SMG5	98	90.891	Myotis_lucifugus
ENSAMEG00000014458	SMG5	100	90.342	ENSNGAG00000020706	Smg5	98	90.040	Nannospalax_galili
ENSAMEG00000014458	SMG5	99	44.411	ENSNGAG00000012101	-	97	44.411	Nannospalax_galili
ENSAMEG00000014458	SMG5	97	61.900	ENSNBRG00000004332	smg5	96	62.104	Neolamprologus_brichardi
ENSAMEG00000014458	SMG5	100	92.346	ENSNLEG00000012439	SMG5	98	92.346	Nomascus_leucogenys
ENSAMEG00000014458	SMG5	100	84.955	ENSMEUG00000012834	SMG5	98	84.306	Notamacropus_eugenii
ENSAMEG00000014458	SMG5	100	90.332	ENSOPRG00000009152	SMG5	98	90.332	Ochotona_princeps
ENSAMEG00000014458	SMG5	100	91.944	ENSODEG00000012237	SMG5	98	91.944	Octodon_degus
ENSAMEG00000014458	SMG5	100	58.935	ENSONIG00000008632	smg5	98	59.367	Oreochromis_niloticus
ENSAMEG00000014458	SMG5	100	92.246	ENSOCUG00000012886	SMG5	100	92.246	Oryctolagus_cuniculus
ENSAMEG00000014458	SMG5	90	41.379	ENSOCUG00000023338	-	97	40.267	Oryctolagus_cuniculus
ENSAMEG00000014458	SMG5	100	63.320	ENSORLG00020013127	smg5	98	64.407	Oryzias_latipes_hni
ENSAMEG00000014458	SMG5	100	63.429	ENSORLG00015019014	smg5	98	64.911	Oryzias_latipes_hsok
ENSAMEG00000014458	SMG5	82	57.987	ENSOMEG00000021330	smg5	90	58.843	Oryzias_melastigma
ENSAMEG00000014458	SMG5	100	91.944	ENSOGAG00000004966	SMG5	98	91.944	Otolemur_garnettii
ENSAMEG00000014458	SMG5	100	92.951	ENSOARG00000005778	SMG5	98	92.951	Ovis_aries
ENSAMEG00000014458	SMG5	99	44.080	ENSOARG00000011963	-	98	43.781	Ovis_aries
ENSAMEG00000014458	SMG5	100	92.548	ENSPPAG00000011996	SMG5	98	92.548	Pan_paniscus
ENSAMEG00000014458	SMG5	100	95.468	ENSPPRG00000011901	SMG5	100	95.468	Panthera_pardus
ENSAMEG00000014458	SMG5	99	88.391	ENSPTIG00000007892	SMG5	96	89.004	Panthera_tigris_altaica
ENSAMEG00000014458	SMG5	100	92.749	ENSPTRG00000049282	-	98	92.749	Pan_troglodytes
ENSAMEG00000014458	SMG5	100	92.749	ENSPTRG00000023925	SMG5	98	92.749	Pan_troglodytes
ENSAMEG00000014458	SMG5	100	92.649	ENSPANG00000011201	SMG5	98	92.649	Papio_anubis
ENSAMEG00000014458	SMG5	100	64.300	ENSPKIG00000009402	smg5	98	65.179	Paramormyrops_kingsleyae
ENSAMEG00000014458	SMG5	100	77.723	ENSPSIG00000015198	SMG5	100	77.877	Pelodiscus_sinensis
ENSAMEG00000014458	SMG5	100	60.244	ENSPMGG00000010465	smg5	98	59.568	Periophthalmus_magnuspinnatus
ENSAMEG00000014458	SMG5	100	88.744	ENSPEMG00000001819	Smg5	98	88.543	Peromyscus_maniculatus_bairdii
ENSAMEG00000014458	SMG5	100	50.486	ENSPMAG00000000410	smg5	98	51.109	Petromyzon_marinus
ENSAMEG00000014458	SMG5	100	85.485	ENSPCIG00000018938	SMG5	98	86.821	Phascolarctos_cinereus
ENSAMEG00000014458	SMG5	91	77.363	ENSPFOG00000010191	smg5	98	61.060	Poecilia_formosa
ENSAMEG00000014458	SMG5	91	77.363	ENSPLAG00000009332	smg5	98	60.969	Poecilia_latipinna
ENSAMEG00000014458	SMG5	91	77.363	ENSPMEG00000014105	smg5	98	64.460	Poecilia_mexicana
ENSAMEG00000014458	SMG5	91	77.363	ENSPREG00000017713	smg5	98	60.878	Poecilia_reticulata
ENSAMEG00000014458	SMG5	100	92.850	ENSPPYG00000000723	SMG5	98	92.850	Pongo_abelii
ENSAMEG00000014458	SMG5	77	98.324	ENSPCAG00000008412	SMG5	75	98.324	Procavia_capensis
ENSAMEG00000014458	SMG5	100	92.749	ENSPCOG00000004741	SMG5	98	92.749	Propithecus_coquereli
ENSAMEG00000014458	SMG5	100	84.290	ENSPVAG00000016748	SMG5	98	84.290	Pteropus_vampyrus
ENSAMEG00000014458	SMG5	100	59.156	ENSPNYG00000013397	smg5	98	58.882	Pundamilia_nyererei
ENSAMEG00000014458	SMG5	100	61.045	ENSPNAG00000028363	smg5	98	61.266	Pygocentrus_nattereri
ENSAMEG00000014458	SMG5	100	89.347	ENSRNOG00000019590	Smg5	98	88.844	Rattus_norvegicus
ENSAMEG00000014458	SMG5	100	92.649	ENSRBIG00000027428	SMG5	98	92.649	Rhinopithecus_bieti
ENSAMEG00000014458	SMG5	100	92.548	ENSRROG00000030035	SMG5	98	92.548	Rhinopithecus_roxellana
ENSAMEG00000014458	SMG5	100	92.749	ENSSBOG00000033339	SMG5	98	92.749	Saimiri_boliviensis_boliviensis
ENSAMEG00000014458	SMG5	88	40.420	ENSSHAG00000000561	-	84	41.470	Sarcophilus_harrisii
ENSAMEG00000014458	SMG5	99	34.531	ENSSHAG00000009572	-	96	34.057	Sarcophilus_harrisii
ENSAMEG00000014458	SMG5	100	85.743	ENSSHAG00000014163	SMG5	100	86.400	Sarcophilus_harrisii
ENSAMEG00000014458	SMG5	65	40.120	ENSSHAG00000000935	-	79	40.994	Sarcophilus_harrisii
ENSAMEG00000014458	SMG5	100	64.945	ENSSFOG00015024175	smg5	98	65.572	Scleropages_formosus
ENSAMEG00000014458	SMG5	91	76.675	ENSSMAG00000013059	smg5	91	77.171	Scophthalmus_maximus
ENSAMEG00000014458	SMG5	100	58.739	ENSSDUG00000007122	smg5	98	59.603	Seriola_dumerili
ENSAMEG00000014458	SMG5	100	59.042	ENSSLDG00000011418	smg5	98	59.855	Seriola_lalandi_dorsalis
ENSAMEG00000014458	SMG5	90	78.747	ENSSARG00000012484	SMG5	97	78.747	Sorex_araneus
ENSAMEG00000014458	SMG5	96	74.975	ENSSPUG00000002260	SMG5	100	74.268	Sphenodon_punctatus
ENSAMEG00000014458	SMG5	91	76.790	ENSSPAG00000014266	smg5	91	77.037	Stegastes_partitus
ENSAMEG00000014458	SMG5	97	72.671	ENSSSCG00000039308	-	97	71.875	Sus_scrofa
ENSAMEG00000014458	SMG5	100	93.756	ENSSSCG00000006490	-	100	93.481	Sus_scrofa
ENSAMEG00000014458	SMG5	53	35.793	ENSSSCG00000037182	-	63	41.885	Sus_scrofa
ENSAMEG00000014458	SMG5	100	77.468	ENSTGUG00000003748	-	98	77.468	Taeniopygia_guttata
ENSAMEG00000014458	SMG5	100	62.734	ENSTRUG00000012580	smg5	98	62.930	Takifugu_rubripes
ENSAMEG00000014458	SMG5	100	62.956	ENSTNIG00000010303	smg5	98	63.142	Tetraodon_nigroviridis
ENSAMEG00000014458	SMG5	59	97.044	ENSTBEG00000002777	SMG5	57	97.044	Tupaia_belangeri
ENSAMEG00000014458	SMG5	97	91.032	ENSTTRG00000001401	SMG5	94	91.032	Tursiops_truncatus
ENSAMEG00000014458	SMG5	100	97.382	ENSUAMG00000013721	SMG5	98	97.382	Ursus_americanus
ENSAMEG00000014458	SMG5	100	92.470	ENSUMAG00000018041	SMG5	97	92.470	Ursus_maritimus
ENSAMEG00000014458	SMG5	99	84.274	ENSVPAG00000009446	SMG5	99	84.274	Vicugna_pacos
ENSAMEG00000014458	SMG5	100	95.267	ENSVVUG00000005887	SMG5	98	95.267	Vulpes_vulpes
ENSAMEG00000014458	SMG5	78	63.808	ENSXETG00000033791	SMG5	99	63.304	Xenopus_tropicalis
ENSAMEG00000014458	SMG5	67	76.866	ENSXCOG00000004379	smg5	93	69.231	Xiphophorus_couchianus
ENSAMEG00000014458	SMG5	91	76.617	ENSXMAG00000013499	smg5	98	64.342	Xiphophorus_maculatus