EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000014886 (Gene tree)
Gene ID: 100464614
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 121443 bases
Position: chrGL194280.1:42033-163475
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000015742	R3H	PF01424.22	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000016396	R3HDM1-201	3309	-	ENSAMEP00000015742	1103 (aa)	-	G1M8S2

Gene Model

Click here to download ENSAMEG00000014886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000014886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000014886	R3HDM1	99	48.264	ENSAMEG00000004812	R3HDM2	100	48.164
ENSAMEG00000014886	R3HDM1	67	51.546	ENSAMEG00000017937	ARPP21	88	52.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000014886	R3HDM1	100	95.195	ENSG00000048991	R3HDM1	100	95.014	Homo_sapiens
ENSAMEG00000014886	R3HDM1	89	47.938	ENSAPOG00000020850	r3hdm1	97	47.544	Acanthochromis_polyacanthus
ENSAMEG00000014886	R3HDM1	89	47.016	ENSAOCG00000005192	r3hdm1	99	46.753	Amphiprion_ocellaris
ENSAMEG00000014886	R3HDM1	89	46.629	ENSAPEG00000016108	r3hdm1	99	46.770	Amphiprion_percula
ENSAMEG00000014886	R3HDM1	89	45.351	ENSATEG00000000232	r3hdm1	99	46.169	Anabas_testudineus
ENSAMEG00000014886	R3HDM1	100	79.513	ENSAPLG00000015231	R3HDM1	100	79.603	Anas_platyrhynchos
ENSAMEG00000014886	R3HDM1	100	76.465	ENSACAG00000001676	R3HDM1	100	77.165	Anolis_carolinensis
ENSAMEG00000014886	R3HDM1	100	95.562	ENSANAG00000035334	R3HDM1	100	95.562	Aotus_nancymaae
ENSAMEG00000014886	R3HDM1	79	50.054	ENSACLG00000027282	r3hdm1	94	49.730	Astatotilapia_calliptera
ENSAMEG00000014886	R3HDM1	93	62.731	ENSAMXG00000003536	r3hdm1	100	55.238	Astyanax_mexicanus
ENSAMEG00000014886	R3HDM1	93	72.902	ENSAMXG00000012861	R3HDM1	100	61.121	Astyanax_mexicanus
ENSAMEG00000014886	R3HDM1	100	92.700	ENSBTAG00000013302	R3HDM1	100	92.964	Bos_taurus
ENSAMEG00000014886	R3HDM1	100	95.467	ENSCJAG00000011718	R3HDM1	100	95.467	Callithrix_jacchus
ENSAMEG00000014886	R3HDM1	100	99.184	ENSCAFG00000005075	R3HDM1	100	99.184	Canis_familiaris
ENSAMEG00000014886	R3HDM1	100	99.093	ENSCAFG00020016119	R3HDM1	100	99.093	Canis_lupus_dingo
ENSAMEG00000014886	R3HDM1	100	95.739	ENSCHIG00000020851	R3HDM1	100	95.739	Capra_hircus
ENSAMEG00000014886	R3HDM1	100	89.895	ENSCPOG00000012784	R3HDM1	100	89.982	Cavia_porcellus
ENSAMEG00000014886	R3HDM1	100	95.195	ENSCCAG00000027199	R3HDM1	100	95.195	Cebus_capucinus
ENSAMEG00000014886	R3HDM1	100	97.670	ENSCATG00000023642	R3HDM1	100	94.742	Cercocebus_atys
ENSAMEG00000014886	R3HDM1	100	89.622	ENSCLAG00000007962	R3HDM1	100	90.033	Chinchilla_lanigera
ENSAMEG00000014886	R3HDM1	100	91.060	ENSCSAG00000016356	R3HDM1	100	91.909	Chlorocebus_sabaeus
ENSAMEG00000014886	R3HDM1	87	84.932	ENSCHOG00000013638	R3HDM1	91	84.932	Choloepus_hoffmanni
ENSAMEG00000014886	R3HDM1	88	80.370	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSAMEG00000014886	R3HDM1	100	94.746	ENSCANG00000034748	R3HDM1	100	94.565	Colobus_angolensis_palliatus
ENSAMEG00000014886	R3HDM1	99	89.497	ENSCGRG00001012357	R3hdm1	97	89.497	Cricetulus_griseus_chok1gshd
ENSAMEG00000014886	R3HDM1	99	92.091	ENSCGRG00000012080	R3hdm1	100	91.362	Cricetulus_griseus_crigri
ENSAMEG00000014886	R3HDM1	89	43.384	ENSCSEG00000008944	r3hdm1	99	43.511	Cynoglossus_semilaevis
ENSAMEG00000014886	R3HDM1	89	48.500	ENSCVAG00000007582	r3hdm1	99	47.725	Cyprinodon_variegatus
ENSAMEG00000014886	R3HDM1	100	91.802	ENSDNOG00000000771	R3HDM1	100	91.802	Dasypus_novemcinctus
ENSAMEG00000014886	R3HDM1	100	83.514	ENSETEG00000013606	R3HDM1	100	83.967	Echinops_telfairi
ENSAMEG00000014886	R3HDM1	66	41.161	ENSEBUG00000014746	arpp21	97	43.098	Eptatretus_burgeri
ENSAMEG00000014886	R3HDM1	100	97.099	ENSEASG00005007392	R3HDM1	100	97.099	Equus_asinus_asinus
ENSAMEG00000014886	R3HDM1	100	97.371	ENSECAG00000019114	R3HDM1	100	97.371	Equus_caballus
ENSAMEG00000014886	R3HDM1	91	88.007	ENSEEUG00000012589	R3HDM1	91	87.638	Erinaceus_europaeus
ENSAMEG00000014886	R3HDM1	93	50.765	ENSELUG00000014413	r3hdm1	100	51.888	Esox_lucius
ENSAMEG00000014886	R3HDM1	94	55.597	ENSELUG00000004909	R3HDM1	99	55.504	Esox_lucius
ENSAMEG00000014886	R3HDM1	100	98.459	ENSFCAG00000027113	R3HDM1	100	98.459	Felis_catus
ENSAMEG00000014886	R3HDM1	75	72.526	ENSFALG00000013731	R3HDM1	72	72.875	Ficedula_albicollis
ENSAMEG00000014886	R3HDM1	100	89.719	ENSFDAG00000016478	R3HDM1	99	95.203	Fukomys_damarensis
ENSAMEG00000014886	R3HDM1	89	46.253	ENSFHEG00000018713	r3hdm1	100	47.174	Fundulus_heteroclitus
ENSAMEG00000014886	R3HDM1	57	64.783	ENSGMOG00000006042	-	74	64.783	Gadus_morhua
ENSAMEG00000014886	R3HDM1	100	55.794	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSAMEG00000014886	R3HDM1	79	49.302	ENSGAFG00000006203	r3hdm1	94	49.675	Gambusia_affinis
ENSAMEG00000014886	R3HDM1	87	47.727	ENSGACG00000014925	r3hdm1	99	47.238	Gasterosteus_aculeatus
ENSAMEG00000014886	R3HDM1	100	78.300	ENSGAGG00000007840	R3HDM1	100	77.758	Gopherus_agassizii
ENSAMEG00000014886	R3HDM1	100	94.923	ENSGGOG00000008156	R3HDM1	100	94.742	Gorilla_gorilla
ENSAMEG00000014886	R3HDM1	100	90.053	ENSHGLG00000015718	R3HDM1	99	95.387	Heterocephalus_glaber_female
ENSAMEG00000014886	R3HDM1	100	69.991	ENSHGLG00100015374	-	100	69.991	Heterocephalus_glaber_male
ENSAMEG00000014886	R3HDM1	100	89.789	ENSHGLG00100003184	-	100	90.033	Heterocephalus_glaber_male
ENSAMEG00000014886	R3HDM1	79	45.094	ENSHCOG00000013366	r3hdm1	88	59.750	Hippocampus_comes
ENSAMEG00000014886	R3HDM1	81	66.587	ENSIPUG00000001676	R3HDM1	99	66.507	Ictalurus_punctatus
ENSAMEG00000014886	R3HDM1	85	67.771	ENSIPUG00000013629	r3hdm1	95	69.375	Ictalurus_punctatus
ENSAMEG00000014886	R3HDM1	100	95.195	ENSSTOG00000007572	R3HDM1	99	97.232	Ictidomys_tridecemlineatus
ENSAMEG00000014886	R3HDM1	95	71.480	ENSLACG00000005334	R3HDM1	100	71.532	Latimeria_chalumnae
ENSAMEG00000014886	R3HDM1	100	67.052	ENSLOCG00000001641	r3hdm1	100	66.430	Lepisosteus_oculatus
ENSAMEG00000014886	R3HDM1	100	92.342	ENSLAFG00000009065	R3HDM1	100	92.342	Loxodonta_africana
ENSAMEG00000014886	R3HDM1	100	95.104	ENSMFAG00000030331	R3HDM1	100	97.537	Macaca_fascicularis
ENSAMEG00000014886	R3HDM1	100	94.923	ENSMMUG00000009844	R3HDM1	100	94.742	Macaca_mulatta
ENSAMEG00000014886	R3HDM1	100	94.923	ENSMNEG00000027793	R3HDM1	100	97.537	Macaca_nemestrina
ENSAMEG00000014886	R3HDM1	100	95.195	ENSMLEG00000043189	R3HDM1	100	95.014	Mandrillus_leucophaeus
ENSAMEG00000014886	R3HDM1	89	48.946	ENSMAMG00000004532	r3hdm1	93	54.598	Mastacembelus_armatus
ENSAMEG00000014886	R3HDM1	89	48.934	ENSMZEG00005003157	r3hdm1	93	57.824	Maylandia_zebra
ENSAMEG00000014886	R3HDM1	100	78.952	ENSMGAG00000012461	R3HDM1	100	78.862	Meleagris_gallopavo
ENSAMEG00000014886	R3HDM1	100	89.211	ENSMAUG00000010315	R3hdm1	100	91.694	Mesocricetus_auratus
ENSAMEG00000014886	R3HDM1	96	70.265	ENSMICG00000042655	-	100	89.046	Microcebus_murinus
ENSAMEG00000014886	R3HDM1	100	94.299	ENSMICG00000005900	-	100	94.299	Microcebus_murinus
ENSAMEG00000014886	R3HDM1	90	78.727	ENSMODG00000000923	R3HDM1	97	78.632	Monodelphis_domestica
ENSAMEG00000014886	R3HDM1	99	46.453	ENSMALG00000009000	r3hdm1	100	46.435	Monopterus_albus
ENSAMEG00000014886	R3HDM1	100	88.732	MGP_CAROLIEiJ_G0014543	R3hdm1	99	93.727	Mus_caroli
ENSAMEG00000014886	R3HDM1	100	88.732	ENSMUSG00000056211	R3hdm1	99	93.727	Mus_musculus
ENSAMEG00000014886	R3HDM1	100	88.556	MGP_PahariEiJ_G0027779	R3hdm1	99	93.173	Mus_pahari
ENSAMEG00000014886	R3HDM1	100	88.908	MGP_SPRETEiJ_G0015350	R3hdm1	99	93.911	Mus_spretus
ENSAMEG00000014886	R3HDM1	100	98.640	ENSMPUG00000002412	R3HDM1	100	98.640	Mustela_putorius_furo
ENSAMEG00000014886	R3HDM1	100	95.570	ENSMLUG00000013824	R3HDM1	100	95.570	Myotis_lucifugus
ENSAMEG00000014886	R3HDM1	100	95.014	ENSNLEG00000008622	R3HDM1	100	94.832	Nomascus_leucogenys
ENSAMEG00000014886	R3HDM1	89	73.754	ENSMEUG00000011784	R3HDM1	100	73.652	Notamacropus_eugenii
ENSAMEG00000014886	R3HDM1	100	89.437	ENSODEG00000008607	R3HDM1	100	91.362	Octodon_degus
ENSAMEG00000014886	R3HDM1	94	48.548	ENSONIG00000012017	r3hdm1	98	48.199	Oreochromis_niloticus
ENSAMEG00000014886	R3HDM1	100	82.146	ENSOANG00000007987	R3HDM1	100	82.146	Ornithorhynchus_anatinus
ENSAMEG00000014886	R3HDM1	89	94.004	ENSOCUG00000017366	R3HDM1	98	94.004	Oryctolagus_cuniculus
ENSAMEG00000014886	R3HDM1	89	45.127	ENSORLG00000004297	r3hdm1	94	47.764	Oryzias_latipes
ENSAMEG00000014886	R3HDM1	89	46.866	ENSORLG00015017355	r3hdm1	99	46.933	Oryzias_latipes_hsok
ENSAMEG00000014886	R3HDM1	100	94.107	ENSOGAG00000003136	R3HDM1	100	94.107	Otolemur_garnettii
ENSAMEG00000014886	R3HDM1	100	95.467	ENSOARG00000010788	R3HDM1	100	95.376	Ovis_aries
ENSAMEG00000014886	R3HDM1	100	95.023	ENSPPAG00000027858	R3HDM1	100	94.842	Pan_paniscus
ENSAMEG00000014886	R3HDM1	100	98.187	ENSPPRG00000002626	R3HDM1	100	98.187	Panthera_pardus
ENSAMEG00000014886	R3HDM1	100	98.187	ENSPTIG00000016581	R3HDM1	100	98.187	Panthera_tigris_altaica
ENSAMEG00000014886	R3HDM1	100	94.932	ENSPTRG00000012494	R3HDM1	100	94.751	Pan_troglodytes
ENSAMEG00000014886	R3HDM1	100	95.104	ENSPANG00000026448	R3HDM1	100	94.923	Papio_anubis
ENSAMEG00000014886	R3HDM1	84	76.266	ENSPKIG00000004328	r3hdm1	91	76.508	Paramormyrops_kingsleyae
ENSAMEG00000014886	R3HDM1	100	78.752	ENSPSIG00000012915	R3HDM1	100	78.662	Pelodiscus_sinensis
ENSAMEG00000014886	R3HDM1	100	89.349	ENSPEMG00000015187	R3hdm1	100	91.362	Peromyscus_maniculatus_bairdii
ENSAMEG00000014886	R3HDM1	88	42.260	ENSPMAG00000003369	-	98	42.717	Petromyzon_marinus
ENSAMEG00000014886	R3HDM1	100	85.135	ENSPCIG00000002491	R3HDM1	100	85.045	Phascolarctos_cinereus
ENSAMEG00000014886	R3HDM1	89	46.481	ENSPFOG00000015036	r3hdm1	99	45.953	Poecilia_formosa
ENSAMEG00000014886	R3HDM1	80	49.469	ENSPLAG00000018042	r3hdm1	95	49.625	Poecilia_latipinna
ENSAMEG00000014886	R3HDM1	80	49.734	ENSPMEG00000023947	r3hdm1	95	49.143	Poecilia_mexicana
ENSAMEG00000014886	R3HDM1	89	48.223	ENSPREG00000007902	r3hdm1	88	62.233	Poecilia_reticulata
ENSAMEG00000014886	R3HDM1	100	94.293	ENSPPYG00000012815	R3HDM1	100	94.203	Pongo_abelii
ENSAMEG00000014886	R3HDM1	100	82.684	ENSPCAG00000006208	R3HDM1	100	82.230	Procavia_capensis
ENSAMEG00000014886	R3HDM1	100	92.670	ENSPCOG00000012698	R3HDM1	100	93.811	Propithecus_coquereli
ENSAMEG00000014886	R3HDM1	100	87.511	ENSPVAG00000006098	R3HDM1	100	87.511	Pteropus_vampyrus
ENSAMEG00000014886	R3HDM1	67	38.844	ENSPNAG00000004162	arpp21	52	48.889	Pygocentrus_nattereri
ENSAMEG00000014886	R3HDM1	93	63.551	ENSPNAG00000013952	r3hdm1	100	63.466	Pygocentrus_nattereri
ENSAMEG00000014886	R3HDM1	100	88.116	ENSRNOG00000004099	R3hdm1	100	87.764	Rattus_norvegicus
ENSAMEG00000014886	R3HDM1	100	94.208	ENSRBIG00000033317	R3HDM1	100	98.893	Rhinopithecus_bieti
ENSAMEG00000014886	R3HDM1	100	94.837	ENSRROG00000034534	R3HDM1	100	94.656	Rhinopithecus_roxellana
ENSAMEG00000014886	R3HDM1	100	95.195	ENSSBOG00000020389	R3HDM1	100	95.195	Saimiri_boliviensis_boliviensis
ENSAMEG00000014886	R3HDM1	100	85.430	ENSSHAG00000016999	R3HDM1	100	85.339	Sarcophilus_harrisii
ENSAMEG00000014886	R3HDM1	100	60.784	ENSSFOG00015014134	r3hdm1	100	70.874	Scleropages_formosus
ENSAMEG00000014886	R3HDM1	100	56.788	ENSSFOG00015019851	-	100	56.394	Scleropages_formosus
ENSAMEG00000014886	R3HDM1	99	44.996	ENSSMAG00000001669	r3hdm1	99	44.991	Scophthalmus_maximus
ENSAMEG00000014886	R3HDM1	89	47.764	ENSSDUG00000010749	r3hdm1	99	48.279	Seriola_dumerili
ENSAMEG00000014886	R3HDM1	99	47.664	ENSSLDG00000004499	r3hdm1	99	47.785	Seriola_lalandi_dorsalis
ENSAMEG00000014886	R3HDM1	69	83.721	ENSSARG00000000352	-	69	83.721	Sorex_araneus
ENSAMEG00000014886	R3HDM1	100	80.759	ENSSPUG00000004167	R3HDM1	100	80.488	Sphenodon_punctatus
ENSAMEG00000014886	R3HDM1	89	49.714	ENSSPAG00000004648	r3hdm1	99	49.704	Stegastes_partitus
ENSAMEG00000014886	R3HDM1	100	97.189	ENSSSCG00000015692	R3HDM1	100	97.189	Sus_scrofa
ENSAMEG00000014886	R3HDM1	100	74.234	ENSTGUG00000011750	R3HDM1	100	74.324	Taeniopygia_guttata
ENSAMEG00000014886	R3HDM1	79	47.318	ENSTRUG00000011654	r3hdm1	93	46.926	Takifugu_rubripes
ENSAMEG00000014886	R3HDM1	83	46.826	ENSTNIG00000010362	r3hdm1	95	46.885	Tetraodon_nigroviridis
ENSAMEG00000014886	R3HDM1	100	89.211	ENSTTRG00000003935	R3HDM1	100	89.211	Tursiops_truncatus
ENSAMEG00000014886	R3HDM1	70	99.485	ENSUAMG00000024806	R3HDM1	99	97.417	Ursus_americanus
ENSAMEG00000014886	R3HDM1	100	94.560	ENSUMAG00000005552	R3HDM1	100	96.254	Ursus_maritimus
ENSAMEG00000014886	R3HDM1	93	100.000	ENSVPAG00000007333	R3HDM1	93	100.000	Vicugna_pacos
ENSAMEG00000014886	R3HDM1	100	96.039	ENSVVUG00000006457	R3HDM1	100	96.039	Vulpes_vulpes
ENSAMEG00000014886	R3HDM1	89	67.706	ENSXETG00000019330	r3hdm1	100	67.505	Xenopus_tropicalis
ENSAMEG00000014886	R3HDM1	67	50.512	ENSXCOG00000017448	r3hdm1	94	50.320	Xiphophorus_couchianus
ENSAMEG00000014886	R3HDM1	89	46.549	ENSXMAG00000007885	r3hdm1	99	45.938	Xiphophorus_maculatus