EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000014931 (Gene tree)
Gene ID: 100466137
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 35096 bases
Position: chrGL192363.1:260220-295315
Accession: 16060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000015745	TruB_N	PF01509.18	8.5e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000016399	TRUB1-201	1059	-	ENSAMEP00000015745	352 (aa)	-	G1M8S5

Gene Model

Click here to download ENSAMEG00000014931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000014931's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000014931	TRUB1	72	31.058	ENSAMEG00000015395	TRUB2	87	31.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000014931	TRUB1	99	92.593	ENSG00000165832	TRUB1	96	92.899	Homo_sapiens
ENSAMEG00000014931	TRUB1	70	68.016	ENSAPOG00000020565	trub1	89	67.742	Acanthochromis_polyacanthus
ENSAMEG00000014931	TRUB1	81	56.643	ENSACIG00000003060	trub1	94	56.643	Amphilophus_citrinellus
ENSAMEG00000014931	TRUB1	70	68.016	ENSAOCG00000017188	trub1	89	67.742	Amphiprion_ocellaris
ENSAMEG00000014931	TRUB1	70	67.339	ENSAPEG00000015209	trub1	89	67.339	Amphiprion_percula
ENSAMEG00000014931	TRUB1	69	68.724	ENSATEG00000023291	trub1	86	68.724	Anabas_testudineus
ENSAMEG00000014931	TRUB1	79	75.090	ENSAPLG00000006808	TRUB1	99	75.090	Anas_platyrhynchos
ENSAMEG00000014931	TRUB1	77	70.480	ENSACAG00000009282	TRUB1	97	70.480	Anolis_carolinensis
ENSAMEG00000014931	TRUB1	95	94.048	ENSANAG00000022870	TRUB1	95	94.065	Aotus_nancymaae
ENSAMEG00000014931	TRUB1	72	66.929	ENSACLG00000000823	trub1	91	66.929	Astatotilapia_calliptera
ENSAMEG00000014931	TRUB1	77	65.074	ENSAMXG00000015845	trub1	90	65.074	Astyanax_mexicanus
ENSAMEG00000014931	TRUB1	98	93.023	ENSBTAG00000012955	TRUB1	95	93.491	Bos_taurus
ENSAMEG00000014931	TRUB1	99	93.182	ENSCJAG00000047815	TRUB1	96	93.787	Callithrix_jacchus
ENSAMEG00000014931	TRUB1	99	95.442	ENSCAFG00000011688	TRUB1	96	95.858	Canis_familiaris
ENSAMEG00000014931	TRUB1	99	95.726	ENSCAFG00020013237	TRUB1	99	95.726	Canis_lupus_dingo
ENSAMEG00000014931	TRUB1	98	92.733	ENSCHIG00000020884	TRUB1	94	94.294	Capra_hircus
ENSAMEG00000014931	TRUB1	99	91.193	ENSTSYG00000000446	TRUB1	86	94.389	Carlito_syrichta
ENSAMEG00000014931	TRUB1	72	83.922	ENSCAPG00000017088	TRUB1	99	83.922	Cavia_aperea
ENSAMEG00000014931	TRUB1	70	85.714	ENSCPOG00000040236	-	81	92.893	Cavia_porcellus
ENSAMEG00000014931	TRUB1	70	79.839	ENSCPOG00000030129	-	76	92.821	Cavia_porcellus
ENSAMEG00000014931	TRUB1	96	93.195	ENSCCAG00000028842	TRUB1	96	93.195	Cebus_capucinus
ENSAMEG00000014931	TRUB1	99	92.877	ENSCATG00000033431	TRUB1	96	93.195	Cercocebus_atys
ENSAMEG00000014931	TRUB1	70	89.388	ENSCLAG00000008664	TRUB1	95	90.517	Chinchilla_lanigera
ENSAMEG00000014931	TRUB1	99	93.162	ENSCSAG00000004891	TRUB1	96	93.491	Chlorocebus_sabaeus
ENSAMEG00000014931	TRUB1	99	79.023	ENSCHOG00000011931	TRUB1	95	79.403	Choloepus_hoffmanni
ENSAMEG00000014931	TRUB1	78	78.832	ENSCPBG00000003051	TRUB1	94	78.832	Chrysemys_picta_bellii
ENSAMEG00000014931	TRUB1	99	93.162	ENSCANG00000029445	TRUB1	96	93.491	Colobus_angolensis_palliatus
ENSAMEG00000014931	TRUB1	80	78.369	ENSCGRG00001010322	-	79	78.378	Cricetulus_griseus_chok1gshd
ENSAMEG00000014931	TRUB1	73	85.938	ENSCGRG00001016772	-	90	77.926	Cricetulus_griseus_chok1gshd
ENSAMEG00000014931	TRUB1	80	87.234	ENSCGRG00000010806	Trub1	91	86.622	Cricetulus_griseus_crigri
ENSAMEG00000014931	TRUB1	73	62.403	ENSCSEG00000011261	trub1	98	56.908	Cynoglossus_semilaevis
ENSAMEG00000014931	TRUB1	70	68.016	ENSCVAG00000008791	trub1	79	65.769	Cyprinodon_variegatus
ENSAMEG00000014931	TRUB1	80	63.830	ENSDARG00000053805	trub1	93	63.830	Danio_rerio
ENSAMEG00000014931	TRUB1	97	88.012	ENSDNOG00000001069	TRUB1	95	88.131	Dasypus_novemcinctus
ENSAMEG00000014931	TRUB1	99	89.174	ENSDORG00000010431	Trub1	87	94.059	Dipodomys_ordii
ENSAMEG00000014931	TRUB1	81	78.431	ENSETEG00000009183	TRUB1	66	86.577	Echinops_telfairi
ENSAMEG00000014931	TRUB1	96	94.379	ENSEASG00005014739	TRUB1	96	94.379	Equus_asinus_asinus
ENSAMEG00000014931	TRUB1	96	94.379	ENSECAG00000007177	TRUB1	96	94.379	Equus_caballus
ENSAMEG00000014931	TRUB1	99	76.667	ENSEEUG00000013993	TRUB1	96	78.324	Erinaceus_europaeus
ENSAMEG00000014931	TRUB1	70	69.231	ENSELUG00000000502	trub1	86	69.231	Esox_lucius
ENSAMEG00000014931	TRUB1	96	94.395	ENSFCAG00000031927	TRUB1	97	94.395	Felis_catus
ENSAMEG00000014931	TRUB1	69	75.620	ENSFALG00000002232	TRUB1	92	75.620	Ficedula_albicollis
ENSAMEG00000014931	TRUB1	70	87.755	ENSFDAG00000008140	TRUB1	95	90.086	Fukomys_damarensis
ENSAMEG00000014931	TRUB1	70	66.397	ENSFHEG00000004016	trub1	84	66.397	Fundulus_heteroclitus
ENSAMEG00000014931	TRUB1	78	73.723	ENSGALG00000009091	TRUB1	96	73.723	Gallus_gallus
ENSAMEG00000014931	TRUB1	68	65.145	ENSGAFG00000009193	trub1	86	64.228	Gambusia_affinis
ENSAMEG00000014931	TRUB1	57	66.667	ENSGACG00000015387	trub1	98	66.667	Gasterosteus_aculeatus
ENSAMEG00000014931	TRUB1	88	72.990	ENSGAGG00000009758	TRUB1	81	77.622	Gopherus_agassizii
ENSAMEG00000014931	TRUB1	99	93.162	ENSGGOG00000004583	TRUB1	96	93.491	Gorilla_gorilla
ENSAMEG00000014931	TRUB1	72	66.929	ENSHBUG00000016787	trub1	91	66.929	Haplochromis_burtoni
ENSAMEG00000014931	TRUB1	99	86.895	ENSHGLG00000015314	TRUB1	86	90.429	Heterocephalus_glaber_female
ENSAMEG00000014931	TRUB1	70	86.531	ENSHGLG00100009183	TRUB1	83	94.416	Heterocephalus_glaber_male
ENSAMEG00000014931	TRUB1	70	67.206	ENSHCOG00000017877	trub1	89	67.206	Hippocampus_comes
ENSAMEG00000014931	TRUB1	79	65.468	ENSIPUG00000017559	trub1	97	65.468	Ictalurus_punctatus
ENSAMEG00000014931	TRUB1	86	94.059	ENSSTOG00000003641	TRUB1	90	94.059	Ictidomys_tridecemlineatus
ENSAMEG00000014931	TRUB1	99	82.621	ENSJJAG00000011800	Trub1	88	89.701	Jaculus_jaculus
ENSAMEG00000014931	TRUB1	72	65.251	ENSKMAG00000006232	trub1	92	65.251	Kryptolebias_marmoratus
ENSAMEG00000014931	TRUB1	76	64.179	ENSLBEG00000026722	trub1	92	64.179	Labrus_bergylta
ENSAMEG00000014931	TRUB1	79	72.302	ENSLACG00000014885	TRUB1	92	72.302	Latimeria_chalumnae
ENSAMEG00000014931	TRUB1	78	69.818	ENSLOCG00000012979	trub1	93	69.818	Lepisosteus_oculatus
ENSAMEG00000014931	TRUB1	99	79.387	ENSLAFG00000015452	TRUB1	86	84.437	Loxodonta_africana
ENSAMEG00000014931	TRUB1	99	92.877	ENSMFAG00000031767	TRUB1	96	93.195	Macaca_fascicularis
ENSAMEG00000014931	TRUB1	99	93.162	ENSMMUG00000001902	TRUB1	96	93.491	Macaca_mulatta
ENSAMEG00000014931	TRUB1	99	88.889	ENSMNEG00000044646	TRUB1	96	89.053	Macaca_nemestrina
ENSAMEG00000014931	TRUB1	99	92.877	ENSMLEG00000042655	TRUB1	96	93.195	Mandrillus_leucophaeus
ENSAMEG00000014931	TRUB1	72	66.929	ENSMZEG00005024095	trub1	91	66.929	Maylandia_zebra
ENSAMEG00000014931	TRUB1	78	72.993	ENSMGAG00000011135	TRUB1	93	72.993	Meleagris_gallopavo
ENSAMEG00000014931	TRUB1	85	83.667	ENSMAUG00000011101	Trub1	89	83.775	Mesocricetus_auratus
ENSAMEG00000014931	TRUB1	99	94.017	ENSMICG00000016324	TRUB1	96	94.379	Microcebus_murinus
ENSAMEG00000014931	TRUB1	93	83.180	ENSMOCG00000017759	Trub1	91	86.799	Microtus_ochrogaster
ENSAMEG00000014931	TRUB1	82	82.353	ENSMODG00000009676	TRUB1	82	80.602	Monodelphis_domestica
ENSAMEG00000014931	TRUB1	99	81.197	MGP_CAROLIEiJ_G0023100	Trub1	89	85.479	Mus_caroli
ENSAMEG00000014931	TRUB1	99	80.057	ENSMUSG00000025086	Trub1	89	84.488	Mus_musculus
ENSAMEG00000014931	TRUB1	99	81.197	MGP_PahariEiJ_G0014588	Trub1	89	85.809	Mus_pahari
ENSAMEG00000014931	TRUB1	99	80.342	MGP_SPRETEiJ_G0024021	Trub1	89	84.818	Mus_spretus
ENSAMEG00000014931	TRUB1	100	96.307	ENSMPUG00000003556	TRUB1	100	96.307	Mustela_putorius_furo
ENSAMEG00000014931	TRUB1	95	88.095	ENSMLUG00000017686	TRUB1	96	87.278	Myotis_lucifugus
ENSAMEG00000014931	TRUB1	99	85.470	ENSNGAG00000018682	Trub1	86	90.099	Nannospalax_galili
ENSAMEG00000014931	TRUB1	70	68.145	ENSNBRG00000023393	trub1	88	68.145	Neolamprologus_brichardi
ENSAMEG00000014931	TRUB1	96	92.604	ENSNLEG00000016345	TRUB1	96	92.604	Nomascus_leucogenys
ENSAMEG00000014931	TRUB1	57	90.050	ENSMEUG00000006603	TRUB1	78	87.204	Notamacropus_eugenii
ENSAMEG00000014931	TRUB1	86	85.149	ENSOPRG00000009371	TRUB1	88	85.149	Ochotona_princeps
ENSAMEG00000014931	TRUB1	99	84.900	ENSODEG00000010854	TRUB1	96	85.799	Octodon_degus
ENSAMEG00000014931	TRUB1	70	67.742	ENSONIG00000007249	trub1	89	67.742	Oreochromis_niloticus
ENSAMEG00000014931	TRUB1	78	79.348	ENSOANG00000001556	TRUB1	93	77.193	Ornithorhynchus_anatinus
ENSAMEG00000014931	TRUB1	99	83.476	ENSOCUG00000009456	TRUB1	96	86.787	Oryctolagus_cuniculus
ENSAMEG00000014931	TRUB1	69	69.136	ENSORLG00000029719	trub1	86	69.136	Oryzias_latipes
ENSAMEG00000014931	TRUB1	69	68.724	ENSORLG00020016767	trub1	85	68.724	Oryzias_latipes_hni
ENSAMEG00000014931	TRUB1	69	68.724	ENSORLG00015014728	trub1	86	68.724	Oryzias_latipes_hsok
ENSAMEG00000014931	TRUB1	80	63.028	ENSOMEG00000014556	trub1	96	63.121	Oryzias_melastigma
ENSAMEG00000014931	TRUB1	99	94.017	ENSOGAG00000015895	TRUB1	96	95.562	Otolemur_garnettii
ENSAMEG00000014931	TRUB1	84	93.377	ENSOARG00000015591	TRUB1	87	93.137	Ovis_aries
ENSAMEG00000014931	TRUB1	99	93.162	ENSPPAG00000043645	TRUB1	96	93.491	Pan_paniscus
ENSAMEG00000014931	TRUB1	96	93.805	ENSPPRG00000007096	TRUB1	97	93.805	Panthera_pardus
ENSAMEG00000014931	TRUB1	96	94.100	ENSPTIG00000006378	TRUB1	97	94.100	Panthera_tigris_altaica
ENSAMEG00000014931	TRUB1	99	93.162	ENSPTRG00000002964	TRUB1	96	93.491	Pan_troglodytes
ENSAMEG00000014931	TRUB1	99	93.162	ENSPANG00000020712	TRUB1	96	93.491	Papio_anubis
ENSAMEG00000014931	TRUB1	78	76.277	ENSPSIG00000012877	TRUB1	93	76.277	Pelodiscus_sinensis
ENSAMEG00000014931	TRUB1	70	65.182	ENSPMGG00000000075	trub1	88	65.182	Periophthalmus_magnuspinnatus
ENSAMEG00000014931	TRUB1	99	79.202	ENSPEMG00000011156	Trub1	88	84.768	Peromyscus_maniculatus_bairdii
ENSAMEG00000014931	TRUB1	82	81.661	ENSPCIG00000009729	TRUB1	97	68.436	Phascolarctos_cinereus
ENSAMEG00000014931	TRUB1	70	65.992	ENSPFOG00000009950	trub1	90	65.992	Poecilia_formosa
ENSAMEG00000014931	TRUB1	70	65.992	ENSPLAG00000013855	trub1	86	65.992	Poecilia_latipinna
ENSAMEG00000014931	TRUB1	70	65.992	ENSPMEG00000009064	trub1	88	65.992	Poecilia_mexicana
ENSAMEG00000014931	TRUB1	70	66.802	ENSPREG00000003343	trub1	88	66.802	Poecilia_reticulata
ENSAMEG00000014931	TRUB1	96	92.899	ENSPPYG00000002676	TRUB1	96	92.899	Pongo_abelii
ENSAMEG00000014931	TRUB1	99	75.989	ENSPCAG00000008427	TRUB1	96	75.000	Procavia_capensis
ENSAMEG00000014931	TRUB1	99	88.604	ENSPCOG00000024360	TRUB1	96	88.724	Propithecus_coquereli
ENSAMEG00000014931	TRUB1	75	94.318	ENSPVAG00000007575	TRUB1	95	94.821	Pteropus_vampyrus
ENSAMEG00000014931	TRUB1	72	66.929	ENSPNYG00000018614	trub1	91	66.929	Pundamilia_nyererei
ENSAMEG00000014931	TRUB1	74	58.779	ENSPNAG00000006881	trub1	88	57.664	Pygocentrus_nattereri
ENSAMEG00000014931	TRUB1	99	81.481	ENSRNOG00000017321	Trub1	88	85.479	Rattus_norvegicus
ENSAMEG00000014931	TRUB1	99	83.191	ENSRBIG00000033423	TRUB1	96	83.432	Rhinopithecus_bieti
ENSAMEG00000014931	TRUB1	99	92.593	ENSRROG00000033902	TRUB1	96	93.195	Rhinopithecus_roxellana
ENSAMEG00000014931	TRUB1	96	93.491	ENSSBOG00000024237	TRUB1	96	93.491	Saimiri_boliviensis_boliviensis
ENSAMEG00000014931	TRUB1	73	81.323	ENSSHAG00000009346	TRUB1	86	81.323	Sarcophilus_harrisii
ENSAMEG00000014931	TRUB1	70	69.388	ENSSFOG00015022124	trub1	83	69.388	Scleropages_formosus
ENSAMEG00000014931	TRUB1	70	68.145	ENSSMAG00000001020	trub1	88	68.145	Scophthalmus_maximus
ENSAMEG00000014931	TRUB1	69	68.595	ENSSDUG00000016414	trub1	88	68.548	Seriola_dumerili
ENSAMEG00000014931	TRUB1	69	69.008	ENSSLDG00000015486	trub1	88	68.952	Seriola_lalandi_dorsalis
ENSAMEG00000014931	TRUB1	80	76.950	ENSSPUG00000001642	TRUB1	96	76.950	Sphenodon_punctatus
ENSAMEG00000014931	TRUB1	75	66.038	ENSSPAG00000001217	trub1	94	66.038	Stegastes_partitus
ENSAMEG00000014931	TRUB1	99	88.889	ENSSSCG00000010653	TRUB1	96	89.349	Sus_scrofa
ENSAMEG00000014931	TRUB1	77	75.368	ENSTGUG00000010971	TRUB1	97	75.182	Taeniopygia_guttata
ENSAMEG00000014931	TRUB1	73	75.781	ENSTBEG00000002880	TRUB1	100	75.781	Tupaia_belangeri
ENSAMEG00000014931	TRUB1	71	89.641	ENSTTRG00000005767	TRUB1	95	93.227	Tursiops_truncatus
ENSAMEG00000014931	TRUB1	100	97.159	ENSUAMG00000024876	TRUB1	100	97.159	Ursus_americanus
ENSAMEG00000014931	TRUB1	100	93.466	ENSUMAG00000002411	TRUB1	100	93.466	Ursus_maritimus
ENSAMEG00000014931	TRUB1	99	93.447	ENSVPAG00000005507	TRUB1	96	93.491	Vicugna_pacos
ENSAMEG00000014931	TRUB1	99	95.157	ENSVVUG00000010085	TRUB1	83	95.157	Vulpes_vulpes
ENSAMEG00000014931	TRUB1	78	66.788	ENSXETG00000023828	trub1	98	66.788	Xenopus_tropicalis
ENSAMEG00000014931	TRUB1	68	65.560	ENSXCOG00000017847	trub1	86	64.898	Xiphophorus_couchianus
ENSAMEG00000014931	TRUB1	70	65.182	ENSXMAG00000014701	trub1	88	65.182	Xiphophorus_maculatus