EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000015127 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 972 bases
Position: chrGL192395.1:1406100-1407071
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000015937	RRM_1	PF00076.22	4.6e-19	1	2
ENSAMEP00000015937	RRM_1	PF00076.22	4.6e-19	2	2
ENSAMEP00000015932	RRM_1	PF00076.22	3.4e-10	1	1
ENSAMEP00000015932	HnRNPA1	PF11627.8	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000016602	-	663	-	ENSAMEP00000015937	221 (aa)	-	G1M9B7
ENSAMET00000016597	-	597	-	ENSAMEP00000015932	199 (aa)	-	G1M9B2

Gene Model

Click here to download ENSAMEG00000015127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000015127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000015127	-	82	59.375	ENSAMEG00000002186	-	66	58.919
ENSAMEG00000015127	-	56	65.926	ENSAMEG00000014782	-	69	65.000
ENSAMEG00000015127	-	90	54.018	ENSAMEG00000005983	HNRNPA2B1	58	55.882
ENSAMEG00000015127	-	57	61.871	ENSAMEG00000004293	-	58	60.140
ENSAMEG00000015127	-	82	63.402	ENSAMEG00000011920	HNRNPA3	50	63.784
ENSAMEG00000015127	-	99	65.217	ENSAMEG00000000439	-	75	65.217
ENSAMEG00000015127	-	77	35.714	ENSAMEG00000002697	MSI2	59	35.556
ENSAMEG00000015127	-	67	76.056	ENSAMEG00000006409	-	83	76.056
ENSAMEG00000015127	-	75	69.101	ENSAMEG00000006838	-	75	74.138
ENSAMEG00000015127	-	73	47.399	ENSAMEG00000005593	-	77	48.125
ENSAMEG00000015127	-	76	38.323	ENSAMEG00000002760	-	53	38.506
ENSAMEG00000015127	-	71	32.941	ENSAMEG00000005158	HNRNPD	52	32.749
ENSAMEG00000015127	-	81	67.876	ENSAMEG00000004289	-	73	69.048
ENSAMEG00000015127	-	75	41.573	ENSAMEG00000016316	HNRNPA0	59	41.209
ENSAMEG00000015127	-	76	74.586	ENSAMEG00000000717	-	56	75.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000015127	-	93	48.848	ENSCAFG00000005762	-	59	48.372	Canis_familiaris
ENSAMEG00000015127	-	83	68.878	ENSCAFG00000002232	-	55	69.399	Canis_familiaris
ENSAMEG00000015127	-	65	56.410	ENSDNOG00000009228	-	82	55.844	Dasypus_novemcinctus
ENSAMEG00000015127	-	72	77.966	ENSPTRG00000031176	-	62	70.558	Pan_troglodytes