EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000015218 (Gene tree)
Gene ID: 100474030
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Plus strand
Length: 70253 bases
Position: chrGL192610.1:1700600-1770852
Accession: 100474030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000016085	ResIII	PF04851.15	9.1e-13	1	1
ENSAMEP00000016085	DEAD	PF00270.29	8.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000016755	SMARCA1-201	3213	XM_002918590	ENSAMEP00000016085	1070 (aa)	XP_002918636	G1M9R3

Gene Model

Click here to download ENSAMEG00000015218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000015218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000015218	SMARCA1	93	84.592	ENSAMEG00000009585	SMARCA5	93	84.592
ENSAMEG00000015218	SMARCA1	54	43.053	ENSAMEG00000017063	CHD1L	61	43.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000015218	SMARCA1	100	97.009	ENSG00000102038	SMARCA1	100	97.009	Homo_sapiens
ENSAMEG00000015218	SMARCA1	92	82.692	ENSAPOG00000016035	smarca5	98	83.153	Acanthochromis_polyacanthus
ENSAMEG00000015218	SMARCA1	85	83.279	ENSACIG00000016982	smarca5	99	83.370	Amphilophus_citrinellus
ENSAMEG00000015218	SMARCA1	92	82.692	ENSAOCG00000015578	smarca5	95	81.737	Amphiprion_ocellaris
ENSAMEG00000015218	SMARCA1	92	82.692	ENSAPEG00000011117	smarca5	99	83.140	Amphiprion_percula
ENSAMEG00000015218	SMARCA1	93	82.294	ENSATEG00000012894	smarca5	95	81.737	Anabas_testudineus
ENSAMEG00000015218	SMARCA1	93	91.851	ENSAPLG00000013149	SMARCA1	100	91.851	Anas_platyrhynchos
ENSAMEG00000015218	SMARCA1	97	88.388	ENSACAG00000011376	SMARCA1	95	90.208	Anolis_carolinensis
ENSAMEG00000015218	SMARCA1	98	92.286	ENSANAG00000023098	SMARCA1	100	91.963	Aotus_nancymaae
ENSAMEG00000015218	SMARCA1	96	80.310	ENSACLG00000025356	smarca5	95	82.271	Astatotilapia_calliptera
ENSAMEG00000015218	SMARCA1	98	79.828	ENSAMXG00000005709	smarca5	94	82.979	Astyanax_mexicanus
ENSAMEG00000015218	SMARCA1	88	87.155	ENSAMXG00000011227	smarca1	99	88.769	Astyanax_mexicanus
ENSAMEG00000015218	SMARCA1	99	96.359	ENSBTAG00000002292	SMARCA1	99	96.667	Bos_taurus
ENSAMEG00000015218	SMARCA1	93	62.575	WBGene00002169	isw-1	97	62.575	Caenorhabditis_elegans
ENSAMEG00000015218	SMARCA1	100	96.729	ENSCJAG00000002868	SMARCA1	100	96.729	Callithrix_jacchus
ENSAMEG00000015218	SMARCA1	100	89.312	ENSCAFG00000018673	SMARCA1	100	89.312	Canis_familiaris
ENSAMEG00000015218	SMARCA1	100	98.131	ENSCAFG00020001751	SMARCA1	100	98.131	Canis_lupus_dingo
ENSAMEG00000015218	SMARCA1	100	96.459	ENSCHIG00000009837	SMARCA1	100	96.459	Capra_hircus
ENSAMEG00000015218	SMARCA1	95	97.431	ENSTSYG00000004240	SMARCA1	98	96.479	Carlito_syrichta
ENSAMEG00000015218	SMARCA1	100	93.401	ENSCPOG00000013601	SMARCA1	95	95.575	Cavia_porcellus
ENSAMEG00000015218	SMARCA1	100	93.645	ENSCCAG00000030817	SMARCA1	100	93.738	Cebus_capucinus
ENSAMEG00000015218	SMARCA1	100	97.009	ENSCATG00000015921	SMARCA1	100	97.009	Cercocebus_atys
ENSAMEG00000015218	SMARCA1	98	95.333	ENSCLAG00000002171	SMARCA1	100	94.860	Chinchilla_lanigera
ENSAMEG00000015218	SMARCA1	100	96.729	ENSCSAG00000008460	SMARCA1	100	96.729	Chlorocebus_sabaeus
ENSAMEG00000015218	SMARCA1	95	91.510	ENSCPBG00000001146	SMARCA1	94	91.592	Chrysemys_picta_bellii
ENSAMEG00000015218	SMARCA1	93	72.211	ENSCING00000004110	swi/snf	98	72.211	Ciona_intestinalis
ENSAMEG00000015218	SMARCA1	92	72.312	ENSCSAVG00000004620	-	100	73.187	Ciona_savignyi
ENSAMEG00000015218	SMARCA1	100	96.916	ENSCANG00000007183	SMARCA1	100	96.916	Colobus_angolensis_palliatus
ENSAMEG00000015218	SMARCA1	100	92.997	ENSCGRG00001010776	Smarca1	100	93.371	Cricetulus_griseus_chok1gshd
ENSAMEG00000015218	SMARCA1	93	94.673	ENSCGRG00000015301	Smarca1	98	95.142	Cricetulus_griseus_crigri
ENSAMEG00000015218	SMARCA1	92	82.692	ENSCSEG00000000328	smarca5	95	81.936	Cynoglossus_semilaevis
ENSAMEG00000015218	SMARCA1	93	82.093	ENSCVAG00000008668	smarca5	99	82.695	Cyprinodon_variegatus
ENSAMEG00000015218	SMARCA1	93	84.562	ENSDARG00000012776	smarca1	97	84.562	Danio_rerio
ENSAMEG00000015218	SMARCA1	95	80.118	ENSDARG00000052348	smarca5	96	81.194	Danio_rerio
ENSAMEG00000015218	SMARCA1	98	94.556	ENSDNOG00000004315	SMARCA1	99	94.556	Dasypus_novemcinctus
ENSAMEG00000015218	SMARCA1	98	94.078	ENSDORG00000009270	Smarca1	99	93.887	Dipodomys_ordii
ENSAMEG00000015218	SMARCA1	92	72.396	FBgn0011604	Iswi	98	71.665	Drosophila_melanogaster
ENSAMEG00000015218	SMARCA1	77	92.857	ENSETEG00000017426	SMARCA1	85	92.857	Echinops_telfairi
ENSAMEG00000015218	SMARCA1	93	80.020	ENSEBUG00000001239	smarca5	96	80.020	Eptatretus_burgeri
ENSAMEG00000015218	SMARCA1	97	92.692	ENSEASG00005008218	SMARCA1	99	93.936	Equus_asinus_asinus
ENSAMEG00000015218	SMARCA1	100	97.390	ENSECAG00000012106	SMARCA1	100	97.390	Equus_caballus
ENSAMEG00000015218	SMARCA1	75	97.682	ENSEEUG00000014927	SMARCA1	83	97.682	Erinaceus_europaeus
ENSAMEG00000015218	SMARCA1	93	85.828	ENSELUG00000010515	smarca1	97	86.108	Esox_lucius
ENSAMEG00000015218	SMARCA1	100	98.037	ENSFCAG00000018496	SMARCA1	100	98.037	Felis_catus
ENSAMEG00000015218	SMARCA1	86	91.784	ENSFALG00000000209	SMARCA1	98	91.883	Ficedula_albicollis
ENSAMEG00000015218	SMARCA1	93	96.771	ENSFDAG00000009818	SMARCA1	97	96.771	Fukomys_damarensis
ENSAMEG00000015218	SMARCA1	93	82.495	ENSFHEG00000007687	smarca5	94	81.936	Fundulus_heteroclitus
ENSAMEG00000015218	SMARCA1	94	89.552	ENSGALG00000008431	SMARCA1	96	91.481	Gallus_gallus
ENSAMEG00000015218	SMARCA1	93	82.596	ENSGAFG00000017731	smarca5	95	82.036	Gambusia_affinis
ENSAMEG00000015218	SMARCA1	92	92.276	ENSGAGG00000023575	SMARCA1	100	92.276	Gopherus_agassizii
ENSAMEG00000015218	SMARCA1	70	96.000	ENSGGOG00000012841	-	95	96.000	Gorilla_gorilla
ENSAMEG00000015218	SMARCA1	100	95.234	ENSHGLG00000003080	SMARCA1	100	95.234	Heterocephalus_glaber_female
ENSAMEG00000015218	SMARCA1	94	95.262	ENSHGLG00100001102	SMARCA1	100	95.262	Heterocephalus_glaber_male
ENSAMEG00000015218	SMARCA1	92	82.525	ENSHCOG00000005458	smarca5	95	81.836	Hippocampus_comes
ENSAMEG00000015218	SMARCA1	95	83.953	ENSIPUG00000016905	Smarca1	99	85.772	Ictalurus_punctatus
ENSAMEG00000015218	SMARCA1	97	79.864	ENSIPUG00000005229	SMARCA5	97	81.764	Ictalurus_punctatus
ENSAMEG00000015218	SMARCA1	100	96.075	ENSSTOG00000014524	SMARCA1	100	96.075	Ictidomys_tridecemlineatus
ENSAMEG00000015218	SMARCA1	100	93.953	ENSJJAG00000002593	Smarca1	100	93.860	Jaculus_jaculus
ENSAMEG00000015218	SMARCA1	92	82.828	ENSKMAG00000003777	smarca5	95	82.136	Kryptolebias_marmoratus
ENSAMEG00000015218	SMARCA1	88	82.715	ENSLBEG00000013295	SMARCA1	100	83.686	Labrus_bergylta
ENSAMEG00000015218	SMARCA1	94	81.537	ENSLBEG00000018112	smarca5	95	81.537	Labrus_bergylta
ENSAMEG00000015218	SMARCA1	96	87.914	ENSLACG00000016697	SMARCA1	98	88.823	Latimeria_chalumnae
ENSAMEG00000015218	SMARCA1	94	87.599	ENSLOCG00000014591	smarca1	97	87.599	Lepisosteus_oculatus
ENSAMEG00000015218	SMARCA1	95	95.187	ENSLAFG00000000896	SMARCA1	100	95.187	Loxodonta_africana
ENSAMEG00000015218	SMARCA1	100	97.009	ENSMFAG00000002117	SMARCA1	100	97.009	Macaca_fascicularis
ENSAMEG00000015218	SMARCA1	100	97.009	ENSMMUG00000008818	SMARCA1	100	97.009	Macaca_mulatta
ENSAMEG00000015218	SMARCA1	100	97.009	ENSMNEG00000041768	SMARCA1	100	97.009	Macaca_nemestrina
ENSAMEG00000015218	SMARCA1	100	96.916	ENSMLEG00000043198	SMARCA1	100	96.916	Mandrillus_leucophaeus
ENSAMEG00000015218	SMARCA1	93	82.696	ENSMAMG00000014294	smarca5	96	81.701	Mastacembelus_armatus
ENSAMEG00000015218	SMARCA1	96	80.310	ENSMZEG00005009369	smarca5	95	82.271	Maylandia_zebra
ENSAMEG00000015218	SMARCA1	95	90.837	ENSMGAG00000007042	SMARCA1	99	90.999	Meleagris_gallopavo
ENSAMEG00000015218	SMARCA1	98	94.842	ENSMAUG00000008133	Smarca1	99	94.842	Mesocricetus_auratus
ENSAMEG00000015218	SMARCA1	100	96.729	ENSMICG00000015768	SMARCA1	100	96.729	Microcebus_murinus
ENSAMEG00000015218	SMARCA1	100	93.860	ENSMOCG00000009464	Smarca1	100	93.860	Microtus_ochrogaster
ENSAMEG00000015218	SMARCA1	94	80.140	ENSMMOG00000005547	smarca5	99	80.140	Mola_mola
ENSAMEG00000015218	SMARCA1	98	88.095	ENSMODG00000013187	-	99	88.230	Monodelphis_domestica
ENSAMEG00000015218	SMARCA1	92	82.323	ENSMALG00000002081	smarca5	97	81.911	Monopterus_albus
ENSAMEG00000015218	SMARCA1	100	93.953	MGP_CAROLIEiJ_G0033034	Smarca1	100	93.767	Mus_caroli
ENSAMEG00000015218	SMARCA1	100	93.953	ENSMUSG00000031099	Smarca1	100	93.767	Mus_musculus
ENSAMEG00000015218	SMARCA1	100	93.953	MGP_PahariEiJ_G0031579	Smarca1	100	93.767	Mus_pahari
ENSAMEG00000015218	SMARCA1	100	94.047	MGP_SPRETEiJ_G0034192	Smarca1	100	93.860	Mus_spretus
ENSAMEG00000015218	SMARCA1	100	98.224	ENSMPUG00000017423	SMARCA1	95	98.224	Mustela_putorius_furo
ENSAMEG00000015218	SMARCA1	98	95.252	ENSMLUG00000029614	SMARCA1	100	94.030	Myotis_lucifugus
ENSAMEG00000015218	SMARCA1	98	95.415	ENSNGAG00000006492	Smarca1	99	95.415	Nannospalax_galili
ENSAMEG00000015218	SMARCA1	93	82.797	ENSNBRG00000004463	smarca5	99	82.236	Neolamprologus_brichardi
ENSAMEG00000015218	SMARCA1	100	96.355	ENSNLEG00000015179	SMARCA1	100	96.355	Nomascus_leucogenys
ENSAMEG00000015218	SMARCA1	89	81.723	ENSMEUG00000008819	SMARCA1	99	81.703	Notamacropus_eugenii
ENSAMEG00000015218	SMARCA1	96	95.521	ENSODEG00000012163	SMARCA1	99	94.842	Octodon_degus
ENSAMEG00000015218	SMARCA1	96	80.407	ENSONIG00000009993	smarca5	95	82.371	Oreochromis_niloticus
ENSAMEG00000015218	SMARCA1	92	92.175	ENSOANG00000002862	SMARCA1	100	92.175	Ornithorhynchus_anatinus
ENSAMEG00000015218	SMARCA1	100	93.832	ENSOCUG00000001047	SMARCA1	100	93.458	Oryctolagus_cuniculus
ENSAMEG00000015218	SMARCA1	92	82.727	ENSORLG00000021998	smarca5	95	82.036	Oryzias_latipes
ENSAMEG00000015218	SMARCA1	92	82.727	ENSORLG00020017679	smarca5	95	82.036	Oryzias_latipes_hni
ENSAMEG00000015218	SMARCA1	92	82.727	ENSORLG00015017210	smarca5	95	81.936	Oryzias_latipes_hsok
ENSAMEG00000015218	SMARCA1	92	82.727	ENSOMEG00000000086	smarca5	95	81.936	Oryzias_melastigma
ENSAMEG00000015218	SMARCA1	98	96.657	ENSOGAG00000004399	SMARCA1	99	96.657	Otolemur_garnettii
ENSAMEG00000015218	SMARCA1	95	97.730	ENSOARG00000014638	SMARCA1	100	97.782	Ovis_aries
ENSAMEG00000015218	SMARCA1	100	97.009	ENSPPAG00000034647	SMARCA1	100	97.009	Pan_paniscus
ENSAMEG00000015218	SMARCA1	100	98.224	ENSPPRG00000008929	SMARCA1	100	98.224	Panthera_pardus
ENSAMEG00000015218	SMARCA1	95	97.453	ENSPTIG00000000915	SMARCA1	98	97.453	Panthera_tigris_altaica
ENSAMEG00000015218	SMARCA1	100	97.009	ENSPTRG00000049876	SMARCA1	100	97.009	Pan_troglodytes
ENSAMEG00000015218	SMARCA1	100	97.009	ENSPANG00000003871	SMARCA1	100	97.009	Papio_anubis
ENSAMEG00000015218	SMARCA1	89	85.819	ENSPKIG00000013411	smarca1	98	85.656	Paramormyrops_kingsleyae
ENSAMEG00000015218	SMARCA1	95	91.412	ENSPSIG00000010101	SMARCA1	100	91.972	Pelodiscus_sinensis
ENSAMEG00000015218	SMARCA1	98	95.415	ENSPEMG00000017503	Smarca1	99	95.415	Peromyscus_maniculatus_bairdii
ENSAMEG00000015218	SMARCA1	95	90.721	ENSPCIG00000015460	SMARCA1	98	90.801	Phascolarctos_cinereus
ENSAMEG00000015218	SMARCA1	92	82.828	ENSPFOG00000007649	smarca5	95	82.036	Poecilia_formosa
ENSAMEG00000015218	SMARCA1	92	82.828	ENSPLAG00000003363	smarca5	95	82.036	Poecilia_latipinna
ENSAMEG00000015218	SMARCA1	92	82.727	ENSPMEG00000019849	smarca5	95	81.936	Poecilia_mexicana
ENSAMEG00000015218	SMARCA1	92	82.727	ENSPREG00000023250	smarca5	95	81.936	Poecilia_reticulata
ENSAMEG00000015218	SMARCA1	100	94.112	ENSPPYG00000020703	SMARCA1	100	94.112	Pongo_abelii
ENSAMEG00000015218	SMARCA1	77	89.189	ENSPCOG00000020722	SMARCA1	94	91.631	Propithecus_coquereli
ENSAMEG00000015218	SMARCA1	92	96.782	ENSPVAG00000003805	SMARCA1	94	96.782	Pteropus_vampyrus
ENSAMEG00000015218	SMARCA1	56	84.384	ENSPNYG00000012299	smarca5	93	83.200	Pundamilia_nyererei
ENSAMEG00000015218	SMARCA1	100	94.673	ENSRNOG00000003762	Smarca1	100	94.486	Rattus_norvegicus
ENSAMEG00000015218	SMARCA1	100	96.916	ENSRROG00000034167	SMARCA1	100	96.916	Rhinopithecus_roxellana
ENSAMEG00000015218	SMARCA1	96	96.228	ENSSBOG00000020641	SMARCA1	100	97.480	Saimiri_boliviensis_boliviensis
ENSAMEG00000015218	SMARCA1	92	85.279	ENSSHAG00000013518	SMARCA1	99	85.279	Sarcophilus_harrisii
ENSAMEG00000015218	SMARCA1	97	84.712	ENSSFOG00015009043	smarca1	98	86.436	Scleropages_formosus
ENSAMEG00000015218	SMARCA1	95	80.509	ENSSFOG00015016794	smarca5	100	82.383	Scleropages_formosus
ENSAMEG00000015218	SMARCA1	93	81.582	ENSSMAG00000004801	smarca5	95	81.582	Scophthalmus_maximus
ENSAMEG00000015218	SMARCA1	93	82.193	ENSSDUG00000020690	smarca5	96	81.637	Seriola_dumerili
ENSAMEG00000015218	SMARCA1	93	82.193	ENSSLDG00000025190	smarca5	96	81.637	Seriola_lalandi_dorsalis
ENSAMEG00000015218	SMARCA1	85	88.991	ENSSARG00000000842	SMARCA1	91	88.991	Sorex_araneus
ENSAMEG00000015218	SMARCA1	92	90.900	ENSSPUG00000000590	SMARCA1	94	90.881	Sphenodon_punctatus
ENSAMEG00000015218	SMARCA1	93	82.294	ENSSPAG00000002894	smarca5	97	83.153	Stegastes_partitus
ENSAMEG00000015218	SMARCA1	98	96.857	ENSSSCG00000012649	SMARCA1	99	96.857	Sus_scrofa
ENSAMEG00000015218	SMARCA1	93	91.348	ENSTGUG00000003899	-	100	91.348	Taeniopygia_guttata
ENSAMEG00000015218	SMARCA1	93	82.294	ENSTRUG00000014094	smarca5	95	81.737	Takifugu_rubripes
ENSAMEG00000015218	SMARCA1	92	81.818	ENSTNIG00000017717	smarca5	94	80.976	Tetraodon_nigroviridis
ENSAMEG00000015218	SMARCA1	92	90.091	ENSTBEG00000014973	SMARCA1	99	90.081	Tupaia_belangeri
ENSAMEG00000015218	SMARCA1	92	94.710	ENSTTRG00000006168	SMARCA1	99	94.710	Tursiops_truncatus
ENSAMEG00000015218	SMARCA1	100	98.318	ENSUAMG00000020201	SMARCA1	100	98.318	Ursus_americanus
ENSAMEG00000015218	SMARCA1	95	94.466	ENSUMAG00000004073	SMARCA1	97	100.000	Ursus_maritimus
ENSAMEG00000015218	SMARCA1	77	99.351	ENSVPAG00000010492	-	85	99.351	Vicugna_pacos
ENSAMEG00000015218	SMARCA1	95	98.221	ENSVVUG00000008878	SMARCA1	99	98.246	Vulpes_vulpes
ENSAMEG00000015218	SMARCA1	94	88.370	ENSXETG00000001526	smarca1	99	88.370	Xenopus_tropicalis
ENSAMEG00000015218	SMARCA1	93	82.495	ENSXCOG00000011170	smarca5	98	81.936	Xiphophorus_couchianus
ENSAMEG00000015218	SMARCA1	93	82.495	ENSXMAG00000009678	smarca5	97	83.983	Xiphophorus_maculatus