EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMEG00000015480 (Gene tree)
Gene ID: 100481699
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ailuropoda_melanoleuca
Status: putative
Strand: Minus strand
Length: 3151 bases
Position: chrGL193342.1:631853-635003
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMEP00000016324	RNA_pol_L_2	PF13656.6	2.7e-29	1	1
ENSAMEP00000016324	RNA_pol_L	PF01193.24	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMET00000017001	-	381	-	ENSAMEP00000016324	127 (aa)	-	G1MAF0

Gene Model

Click here to download ENSAMEG00000015480's gene model file

Pathways

Pathway ID	Pathway Name	Source
aml03020	RNA polymerase	KEGG
aml05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMEG00000015480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMEG00000015480	-	76	32.000	ENSAMEG00000019095	POLR1D	80	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMEG00000015480	-	93	90.678	ENSG00000228049	POLR2J2	91	98.113	Homo_sapiens
ENSAMEG00000015480	-	100	92.126	ENSG00000005075	POLR2J	100	92.126	Homo_sapiens
ENSAMEG00000015480	-	100	87.402	ENSAPOG00000019538	polr2j	100	87.402	Acanthochromis_polyacanthus
ENSAMEG00000015480	-	85	70.642	ENSACIG00000014549	POLR2J2	90	70.642	Amphilophus_citrinellus
ENSAMEG00000015480	-	100	86.614	ENSAOCG00000006937	polr2j	100	86.614	Amphiprion_ocellaris
ENSAMEG00000015480	-	100	87.402	ENSAPEG00000021761	polr2j	100	87.402	Amphiprion_percula
ENSAMEG00000015480	-	100	87.402	ENSATEG00000013312	-	100	87.402	Anabas_testudineus
ENSAMEG00000015480	-	100	87.402	ENSATEG00000009731	polr2j	100	87.402	Anabas_testudineus
ENSAMEG00000015480	-	87	89.189	ENSAPLG00000003744	-	100	89.189	Anas_platyrhynchos
ENSAMEG00000015480	-	100	83.465	ENSACAG00000000251	POLR2J	100	83.465	Anolis_carolinensis
ENSAMEG00000015480	-	100	87.402	ENSACLG00000014564	polr2j	100	87.402	Astatotilapia_calliptera
ENSAMEG00000015480	-	100	88.976	ENSAMXG00000007517	polr2j	100	88.976	Astyanax_mexicanus
ENSAMEG00000015480	-	57	68.493	ENSBTAG00000048046	-	61	68.493	Bos_taurus
ENSAMEG00000015480	-	88	66.964	WBGene00012187	rpb-11	91	66.964	Caenorhabditis_elegans
ENSAMEG00000015480	-	100	92.126	ENSCJAG00000016203	-	100	92.126	Callithrix_jacchus
ENSAMEG00000015480	-	100	92.126	ENSCAFG00000013683	-	100	92.126	Canis_familiaris
ENSAMEG00000015480	-	86	90.826	ENSTSYG00000029243	-	85	90.826	Carlito_syrichta
ENSAMEG00000015480	-	100	92.126	ENSCPOG00000001401	-	100	92.126	Cavia_porcellus
ENSAMEG00000015480	-	100	68.504	ENSCATG00000016595	-	97	77.451	Cercocebus_atys
ENSAMEG00000015480	-	100	92.126	ENSCLAG00000005238	-	100	92.126	Chinchilla_lanigera
ENSAMEG00000015480	-	100	92.126	ENSCSAG00000018092	-	100	92.126	Chlorocebus_sabaeus
ENSAMEG00000015480	-	100	74.803	ENSCING00000020531	-	100	74.803	Ciona_intestinalis
ENSAMEG00000015480	-	100	74.803	ENSCSAVG00000006948	-	100	74.803	Ciona_savignyi
ENSAMEG00000015480	-	100	92.126	ENSCGRG00001012814	Polr2j	100	92.126	Cricetulus_griseus_chok1gshd
ENSAMEG00000015480	-	100	77.953	ENSCGRG00000008433	Polr2j	100	77.953	Cricetulus_griseus_crigri
ENSAMEG00000015480	-	100	86.614	ENSCSEG00000020352	polr2j	100	86.614	Cynoglossus_semilaevis
ENSAMEG00000015480	-	100	86.614	ENSCVAG00000014267	polr2j	100	86.614	Cyprinodon_variegatus
ENSAMEG00000015480	-	100	88.189	ENSDARG00000035146	polr2j	100	88.189	Danio_rerio
ENSAMEG00000015480	-	100	92.126	ENSDORG00000005934	Polr2j	100	92.126	Dipodomys_ordii
ENSAMEG00000015480	-	98	72.000	FBgn0032634	Rpb11	98	72.000	Drosophila_melanogaster
ENSAMEG00000015480	-	100	59.055	ENSEBUG00000016100	polr2j	100	59.055	Eptatretus_burgeri
ENSAMEG00000015480	-	100	92.126	ENSEASG00005016864	-	100	92.126	Equus_asinus_asinus
ENSAMEG00000015480	-	100	88.189	ENSELUG00000012822	polr2j	100	88.189	Esox_lucius
ENSAMEG00000015480	-	100	92.126	ENSFCAG00000000377	-	100	92.126	Felis_catus
ENSAMEG00000015480	-	100	92.126	ENSFALG00000009523	POLR2J	100	92.126	Ficedula_albicollis
ENSAMEG00000015480	-	100	92.126	ENSFDAG00000010507	-	100	92.126	Fukomys_damarensis
ENSAMEG00000015480	-	100	87.402	ENSFHEG00000006625	polr2j	100	87.402	Fundulus_heteroclitus
ENSAMEG00000015480	-	100	88.189	ENSGMOG00000018207	polr2j	100	88.189	Gadus_morhua
ENSAMEG00000015480	-	100	92.126	ENSGALG00000030808	-	100	92.126	Gallus_gallus
ENSAMEG00000015480	-	100	87.402	ENSGAFG00000019555	polr2j	100	87.402	Gambusia_affinis
ENSAMEG00000015480	-	100	87.402	ENSGACG00000003310	polr2j	100	87.402	Gasterosteus_aculeatus
ENSAMEG00000015480	-	97	82.927	ENSGAGG00000018304	-	96	82.927	Gopherus_agassizii
ENSAMEG00000015480	-	87	86.364	ENSGGOG00000004519	-	80	86.364	Gorilla_gorilla
ENSAMEG00000015480	-	100	87.402	ENSHBUG00000008467	polr2j	100	87.402	Haplochromis_burtoni
ENSAMEG00000015480	-	100	92.126	ENSHGLG00000013598	POLR2J	97	100.000	Heterocephalus_glaber_female
ENSAMEG00000015480	-	100	92.126	ENSHGLG00100011242	POLR2J	97	100.000	Heterocephalus_glaber_male
ENSAMEG00000015480	-	100	87.402	ENSHCOG00000014827	polr2j	68	87.402	Hippocampus_comes
ENSAMEG00000015480	-	100	88.976	ENSIPUG00000023960	polr2j	100	88.976	Ictalurus_punctatus
ENSAMEG00000015480	-	100	92.126	ENSSTOG00000006377	POLR2J	96	100.000	Ictidomys_tridecemlineatus
ENSAMEG00000015480	-	100	92.126	ENSJJAG00000013854	-	100	92.126	Jaculus_jaculus
ENSAMEG00000015480	-	100	87.402	ENSJJAG00000018834	-	100	87.402	Jaculus_jaculus
ENSAMEG00000015480	-	100	87.402	ENSKMAG00000014581	polr2j	79	87.402	Kryptolebias_marmoratus
ENSAMEG00000015480	-	100	87.402	ENSLBEG00000005885	polr2j	100	87.402	Labrus_bergylta
ENSAMEG00000015480	-	100	88.976	ENSLOCG00000001885	polr2j	89	88.976	Lepisosteus_oculatus
ENSAMEG00000015480	-	100	92.126	ENSLAFG00000021507	-	100	92.126	Loxodonta_africana
ENSAMEG00000015480	-	100	90.769	ENSMMUG00000012019	POLR2J	100	90.769	Macaca_mulatta
ENSAMEG00000015480	-	100	87.402	ENSMAMG00000009374	polr2j	100	87.402	Mastacembelus_armatus
ENSAMEG00000015480	-	100	87.402	ENSMZEG00005011932	polr2j	100	87.402	Maylandia_zebra
ENSAMEG00000015480	-	100	92.126	ENSMGAG00000003534	POLR2J	100	92.126	Meleagris_gallopavo
ENSAMEG00000015480	-	100	92.126	ENSMAUG00000013049	Polr2j	100	92.126	Mesocricetus_auratus
ENSAMEG00000015480	-	77	91.837	ENSMICG00000026811	-	98	91.837	Microcebus_murinus
ENSAMEG00000015480	-	100	92.126	ENSMOCG00000001294	Polr2j	100	92.126	Microtus_ochrogaster
ENSAMEG00000015480	-	100	86.614	ENSMMOG00000013265	polr2j	100	86.614	Mola_mola
ENSAMEG00000015480	-	100	92.308	ENSMODG00000013617	-	100	92.308	Monodelphis_domestica
ENSAMEG00000015480	-	100	87.402	ENSMALG00000020749	polr2j	100	87.402	Monopterus_albus
ENSAMEG00000015480	-	100	92.126	MGP_CAROLIEiJ_G0027851	Polr2j	98	99.083	Mus_caroli
ENSAMEG00000015480	-	100	92.126	ENSMUSG00000039771	Polr2j	96	100.000	Mus_musculus
ENSAMEG00000015480	-	100	92.126	MGP_PahariEiJ_G0024434	Polr2j	100	92.126	Mus_pahari
ENSAMEG00000015480	-	100	92.126	MGP_SPRETEiJ_G0028853	Polr2j	96	100.000	Mus_spretus
ENSAMEG00000015480	-	100	92.126	ENSMLUG00000010467	POLR2J	100	92.126	Myotis_lucifugus
ENSAMEG00000015480	-	100	92.126	ENSNGAG00000023412	Polr2j	96	100.000	Nannospalax_galili
ENSAMEG00000015480	-	61	90.909	ENSNBRG00000006580	polr2j	59	90.909	Neolamprologus_brichardi
ENSAMEG00000015480	-	100	92.126	ENSODEG00000015648	-	100	96.460	Octodon_degus
ENSAMEG00000015480	-	100	70.866	ENSODEG00000008559	-	100	70.866	Octodon_degus
ENSAMEG00000015480	-	100	87.402	ENSONIG00000000259	polr2j	100	87.402	Oreochromis_niloticus
ENSAMEG00000015480	-	100	89.764	ENSOANG00000020912	POLR2J	100	89.764	Ornithorhynchus_anatinus
ENSAMEG00000015480	-	100	92.913	ENSOCUG00000023609	POLR2J	100	92.913	Oryctolagus_cuniculus
ENSAMEG00000015480	-	100	87.402	ENSORLG00000029046	polr2j	83	87.402	Oryzias_latipes
ENSAMEG00000015480	-	100	87.402	ENSORLG00020007625	polr2j	83	87.402	Oryzias_latipes_hni
ENSAMEG00000015480	-	100	87.402	ENSORLG00015003457	polr2j	83	87.402	Oryzias_latipes_hsok
ENSAMEG00000015480	-	100	86.614	ENSOMEG00000002097	polr2j	100	86.614	Oryzias_melastigma
ENSAMEG00000015480	-	100	72.656	ENSOGAG00000008250	-	100	72.656	Otolemur_garnettii
ENSAMEG00000015480	-	100	92.126	ENSOARG00000014204	-	98	92.126	Ovis_aries
ENSAMEG00000015480	-	100	92.126	ENSPPRG00000012439	-	100	92.126	Panthera_pardus
ENSAMEG00000015480	-	98	83.871	ENSPTIG00000018714	-	100	88.496	Panthera_tigris_altaica
ENSAMEG00000015480	-	87	90.000	ENSPSIG00000010173	-	100	90.000	Pelodiscus_sinensis
ENSAMEG00000015480	-	100	87.402	ENSPMGG00000021256	polr2j	100	87.402	Periophthalmus_magnuspinnatus
ENSAMEG00000015480	-	100	92.126	ENSPEMG00000015733	Polr2j	100	92.126	Peromyscus_maniculatus_bairdii
ENSAMEG00000015480	-	100	92.126	ENSPCIG00000009026	-	100	92.126	Phascolarctos_cinereus
ENSAMEG00000015480	-	100	87.402	ENSPFOG00000012001	polr2j	99	87.402	Poecilia_formosa
ENSAMEG00000015480	-	100	87.402	ENSPLAG00000014075	polr2j	100	87.402	Poecilia_latipinna
ENSAMEG00000015480	-	100	87.402	ENSPMEG00000020585	polr2j	100	87.402	Poecilia_mexicana
ENSAMEG00000015480	-	100	87.402	ENSPREG00000015255	polr2j	100	87.402	Poecilia_reticulata
ENSAMEG00000015480	-	100	92.126	ENSPCOG00000024573	-	100	92.126	Propithecus_coquereli
ENSAMEG00000015480	-	84	100.000	ENSPVAG00000017770	-	61	100.000	Pteropus_vampyrus
ENSAMEG00000015480	-	100	87.402	ENSPNYG00000014832	polr2j	100	87.402	Pundamilia_nyererei
ENSAMEG00000015480	-	100	86.614	ENSPNAG00000016595	polr2j	100	86.614	Pygocentrus_nattereri
ENSAMEG00000015480	-	100	92.126	ENSRNOG00000001430	Polr2j	100	92.126	Rattus_norvegicus
ENSAMEG00000015480	-	100	92.126	ENSSBOG00000025579	-	100	92.126	Saimiri_boliviensis_boliviensis
ENSAMEG00000015480	-	62	87.342	ENSSHAG00000010443	-	81	87.342	Sarcophilus_harrisii
ENSAMEG00000015480	-	89	92.920	ENSSFOG00015003371	polr2j	86	92.920	Scleropages_formosus
ENSAMEG00000015480	-	100	87.402	ENSSMAG00000006729	polr2j	100	87.402	Scophthalmus_maximus
ENSAMEG00000015480	-	100	87.402	ENSSDUG00000018490	polr2j	100	87.402	Seriola_dumerili
ENSAMEG00000015480	-	100	87.402	ENSSLDG00000022354	polr2j	100	87.402	Seriola_lalandi_dorsalis
ENSAMEG00000015480	-	100	92.126	ENSSPUG00000010802	-	100	92.126	Sphenodon_punctatus
ENSAMEG00000015480	-	100	87.402	ENSSPAG00000021953	polr2j	100	87.402	Stegastes_partitus
ENSAMEG00000015480	-	100	76.378	ENSSSCG00000003703	-	83	76.378	Sus_scrofa
ENSAMEG00000015480	-	100	92.126	ENSSSCG00000007688	-	100	92.126	Sus_scrofa
ENSAMEG00000015480	-	62	87.342	ENSTGUG00000004510	-	100	87.342	Taeniopygia_guttata
ENSAMEG00000015480	-	87	90.000	ENSTGUG00000004501	-	100	90.000	Taeniopygia_guttata
ENSAMEG00000015480	-	100	88.189	ENSTRUG00000020842	polr2j	100	88.189	Takifugu_rubripes
ENSAMEG00000015480	-	100	87.402	ENSTNIG00000002994	polr2j	100	87.402	Tetraodon_nigroviridis
ENSAMEG00000015480	-	94	74.167	ENSTBEG00000005797	-	79	74.167	Tupaia_belangeri
ENSAMEG00000015480	-	100	92.126	ENSUAMG00000011310	-	100	92.126	Ursus_americanus
ENSAMEG00000015480	-	100	92.126	ENSUMAG00000012594	-	100	92.126	Ursus_maritimus
ENSAMEG00000015480	-	100	90.551	ENSXETG00000001108	polr2j	100	90.551	Xenopus_tropicalis
ENSAMEG00000015480	-	100	87.402	ENSXMAG00000012422	polr2j	100	87.402	Xiphophorus_maculatus